RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 DMRT2Q9Y5R5 561 aa24.13■■□□□ 1.45
CCDC90B-215ENST00000529745 EIF2AK4Q9P2K8 1649 aaKnown RBP24.12■■□□□ 1.45
CCDC90B-215ENST00000529745 ESF1Q9H501 851 aaKnown RBP24.1■■□□□ 1.45
CCDC90B-215ENST00000529745 RNF17Q9BXT8 1623 aaKnown RBP24.09■■□□□ 1.45
CCDC90B-215ENST00000529745 CEBPAP49715 358 aaPredicted RBP24.08■■□□□ 1.45
CCDC90B-215ENST00000529745 ABCC5O15440 1437 aa24.08■■□□□ 1.44
CCDC90B-215ENST00000529745 NPATQ14207 1427 aa24.07■■□□□ 1.44
CCDC90B-215ENST00000529745 DAPK1P53355 1430 aa24.06■■□□□ 1.44
CCDC90B-215ENST00000529745 DUOX2Q9NRD8 1548 aa24.05■■□□□ 1.44
CCDC90B-215ENST00000529745 ZMYM3Q14202 1370 aa24.04■■□□□ 1.44
CCDC90B-215ENST00000529745 UHRF1BP1Q6BDS2 1440 aa24.03■■□□□ 1.44
CCDC90B-215ENST00000529745 GGT6Q6P531 493 aa24.03■■□□□ 1.44
CCDC90B-215ENST00000529745 KDM5DQ9BY66 1539 aa24.03■■□□□ 1.44
CCDC90B-215ENST00000529745 ZC3H13Q5T200 1668 aaKnown RBP24.02■■□□□ 1.44
CCDC90B-215ENST00000529745 KIF3BO15066 747 aa24■■□□□ 1.43
CCDC90B-215ENST00000529745 PTPRTO14522 1441 aa24■■□□□ 1.43
CCDC90B-215ENST00000529745 LTBP4Q8N2S1 1624 aa23.99■■□□□ 1.43
CCDC90B-215ENST00000529745 MROH1Q8NDA8 1641 aa23.99■■□□□ 1.43
CCDC90B-215ENST00000529745 IQSEC2Q5JU85 1478 aa23.99■■□□□ 1.43
CCDC90B-215ENST00000529745 ZNF142P52746 1687 aaPredicted RBP23.99■■□□□ 1.43
CCDC90B-215ENST00000529745 PTPRKQ15262 1439 aa23.98■■□□□ 1.43
CCDC90B-215ENST00000529745 ADGRL2O95490 1459 aa23.97■■□□□ 1.43
CCDC90B-215ENST00000529745 ERBINQ96RT1 1412 aa23.97■■□□□ 1.43
CCDC90B-215ENST00000529745 DEPDC5O75140 1603 aa23.95■■□□□ 1.43
CCDC90B-215ENST00000529745 MYO3AQ8NEV4 1616 aa23.95■■□□□ 1.43
CCDC90B-215ENST00000529745 KIF15Q9NS87 1388 aa23.95■■□□□ 1.42
CCDC90B-215ENST00000529745 PRDM15P57071 1507 aaPredicted RBP23.93■■□□□ 1.42
CCDC90B-215ENST00000529745 PZPP20742 1482 aa23.93■■□□□ 1.42
CCDC90B-215ENST00000529745 ABCC3O15438 1527 aa23.91■■□□□ 1.42
CCDC90B-215ENST00000529745 NCOA1Q15788 1441 aa23.91■■□□□ 1.42
CCDC90B-215ENST00000529745 ANKRD30AQ9BXX3 1397 aa23.91■■□□□ 1.42
CCDC90B-215ENST00000529745 CEP152O94986 1710 aa23.9■■□□□ 1.42
CCDC90B-215ENST00000529745 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.89■■□□□ 1.41
CCDC90B-215ENST00000529745 CEP170BQ9Y4F5 1589 aaPredicted RBP23.88■■□□□ 1.41
CCDC90B-215ENST00000529745 WASHC2CQ9Y4E1 1318 aa23.87■■□□□ 1.41
CCDC90B-215ENST00000529745 CAMSAP1Q5T5Y3 1602 aa23.87■■□□□ 1.41
CCDC90B-215ENST00000529745 RRP7BPQ9NSQ0 103 aa23.84■■□□□ 1.41
CCDC90B-215ENST00000529745 VWDEQ8N2E2 1590 aa23.83■■□□□ 1.41
CCDC90B-215ENST00000529745 FAM50AQ14320 339 aaKnown RBP23.83■■□□□ 1.41
CCDC90B-215ENST00000529745 A2ML1A8K2U0 1454 aa23.81■■□□□ 1.4
CCDC90B-215ENST00000529745 PLA2R1Q13018 1463 aa23.81■■□□□ 1.4
CCDC90B-215ENST00000529745 ARHGAP31Q2M1Z3 1444 aa23.8■■□□□ 1.4
CCDC90B-215ENST00000529745 CHIC2Q9UKJ5 165 aa23.8■■□□□ 1.4
CCDC90B-215ENST00000529745 LMTK2Q8IWU2 1503 aa23.79■■□□□ 1.4
CCDC90B-215ENST00000529745 ROCK1Q13464 1354 aa23.78■■□□□ 1.4
CCDC90B-215ENST00000529745 TNRQ92752 1358 aa23.78■■□□□ 1.4
CCDC90B-215ENST00000529745 RRBP1Q9P2E9 1410 aaKnown RBP23.77■■□□□ 1.4
CCDC90B-215ENST00000529745 NLRP1Q9C000 1473 aa23.77■■□□□ 1.4
CCDC90B-215ENST00000529745 ERVK-7P63135 1459 aa23.75■■□□□ 1.39
CCDC90B-215ENST00000529745 UBAP1LF5GYI3 381 aa23.75■■□□□ 1.39
CCDC90B-215ENST00000529745 FBXO31Q5XUX0 539 aaPredicted RBP23.75■■□□□ 1.39
CCDC90B-215ENST00000529745 ANKRD50Q9ULJ7 1429 aa23.75■■□□□ 1.39
CCDC90B-215ENST00000529745 KANK1Q14678 1352 aa23.73■■□□□ 1.39
CCDC90B-215ENST00000529745 UNC13BO14795 1591 aa23.73■■□□□ 1.39
CCDC90B-215ENST00000529745 CFAP65Q6ZU64 1925 aaKnown RBP23.72■■□□□ 1.39
CCDC90B-215ENST00000529745 POLR1AO95602 1720 aaPredicted RBP23.72■■□□□ 1.39
CCDC90B-215ENST00000529745 MED1Q15648 1581 aaPredicted RBP23.7■■□□□ 1.38
CCDC90B-215ENST00000529745 PPARGC1BQ86YN6 1023 aaKnown RBP23.7■■□□□ 1.38
CCDC90B-215ENST00000529745 EFCAB6Q5THR3 1501 aa23.69■■□□□ 1.38
CCDC90B-215ENST00000529745 UGGT1Q9NYU2 1555 aa23.68■■□□□ 1.38
CCDC90B-215ENST00000529745 TET3O43151 1660 aa23.67■■□□□ 1.38
CCDC90B-215ENST00000529745 GCC2Q8IWJ2 1684 aa23.67■■□□□ 1.38
CCDC90B-215ENST00000529745 ZNF335Q9H4Z2 1342 aaPredicted RBP23.66■■□□□ 1.38
CCDC90B-215ENST00000529745 PKD2Q13563 968 aa23.66■■□□□ 1.38
CCDC90B-215ENST00000529745 UBR1Q8IWV7 1749 aa23.66■■□□□ 1.38
CCDC90B-215ENST00000529745 KDM5AP29375 1690 aaKnown RBP23.65■■□□□ 1.38
CCDC90B-215ENST00000529745 RPRD2Q5VT52 1461 aaKnown RBP23.63■■□□□ 1.37
CCDC90B-215ENST00000529745 IQGAP3Q86VI3 1631 aa23.63■■□□□ 1.37
CCDC90B-215ENST00000529745 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.63■■□□□ 1.37
CCDC90B-215ENST00000529745 NEURL4Q96JN8 1562 aa23.62■■□□□ 1.37
CCDC90B-215ENST00000529745 THEMISQ8N1K5 641 aaPredicted RBP23.6■■□□□ 1.37
CCDC90B-215ENST00000529745 NOS1P29475 1434 aa23.59■■□□□ 1.37
CCDC90B-215ENST00000529745 SYNMO15061 1565 aa23.59■■□□□ 1.37
CCDC90B-215ENST00000529745 NCKAP5LQ9HCH0 1330 aa23.59■■□□□ 1.37
CCDC90B-215ENST00000529745 HSPA1LP34931 641 aa23.58■■□□□ 1.37
CCDC90B-215ENST00000529745 PIK3C2BO00750 1634 aa23.58■■□□□ 1.36
CCDC90B-215ENST00000529745 MED14O60244 1454 aa23.57■■□□□ 1.36
CCDC90B-215ENST00000529745 E9PCH4 1651 aa23.55■■□□□ 1.36
CCDC90B-215ENST00000529745 SLIT1O75093 1534 aa23.54■■□□□ 1.36
CCDC90B-215ENST00000529745 ARHGAP23Q9P227 1491 aa23.54■■□□□ 1.36
CCDC90B-215ENST00000529745 ITGAEP38570 1179 aa23.53■■□□□ 1.36
CCDC90B-215ENST00000529745 IQGAP1P46940 1657 aa23.51■■□□□ 1.35
CCDC90B-215ENST00000529745 NAIPQ13075 1403 aa23.5■■□□□ 1.35
CCDC90B-215ENST00000529745 ANKLE2Q86XL3 938 aa23.5■■□□□ 1.35
CCDC90B-215ENST00000529745 SCAF1Q9H7N4 1312 aaKnown RBP23.48■■□□□ 1.35
CCDC90B-215ENST00000529745 ADGRB3O60242 1522 aa23.48■■□□□ 1.35
CCDC90B-215ENST00000529745 HFM1A2PYH4 1435 aa23.47■■□□□ 1.35
CCDC90B-215ENST00000529745 NPHP4O75161 1426 aaPredicted RBP23.46■■□□□ 1.35
CCDC90B-215ENST00000529745 PIP4K2BP78356 416 aa23.46■■□□□ 1.35
CCDC90B-215ENST00000529745 SLC52A1Q9NWF4 448 aa23.46■■□□□ 1.35
CCDC90B-215ENST00000529745 SCAF11Q99590 1463 aaKnown RBP23.44■■□□□ 1.34
CCDC90B-215ENST00000529745 NUP155O75694 1391 aa23.44■■□□□ 1.34
CCDC90B-215ENST00000529745 IDI1Q13907 227 aa23.44■■□□□ 1.34
CCDC90B-215ENST00000529745 MYO5BQ9ULV0 1848 aa23.43■■□□□ 1.34
CCDC90B-215ENST00000529745 TOM1O60784 492 aa23.42■■□□□ 1.34
CCDC90B-215ENST00000529745 SPHKAPQ2M3C7 1700 aa23.42■■□□□ 1.34
CCDC90B-215ENST00000529745 TMEM2Q9UHN6 1383 aa23.41■■□□□ 1.34
CCDC90B-215ENST00000529745 TMEM131LA2VDJ0 1609 aa23.41■■□□□ 1.34
CCDC90B-215ENST00000529745 CPS1P31327 1500 aa23.39■■□□□ 1.34
CCDC90B-215ENST00000529745 LTKP29376 864 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms