RNA–Protein interactions for RNA: ENST00000529619.5

PCDHA5-201, Transcript of protocadherin alpha 5, humanhuman

TSL 1 (best) BASIC

Gene PCDHA5, Length 4,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA5-201ENST00000529619 SPAG9O60271 1321 aaKnown RBP18.65■□□□□ 0.58
PCDHA5-201ENST00000529619 GGT6Q6P531 493 aa18.65■□□□□ 0.58
PCDHA5-201ENST00000529619 SMG6Q86US8 1419 aaKnown RBP18.64■□□□□ 0.58
PCDHA5-201ENST00000529619 TROQ12816 1431 aaPredicted RBP18.64■□□□□ 0.57
PCDHA5-201ENST00000529619 ABCC5O15440 1437 aa18.64■□□□□ 0.57
PCDHA5-201ENST00000529619 ROCK1Q13464 1354 aa18.63■□□□□ 0.57
PCDHA5-201ENST00000529619 URB2Q14146 1524 aaKnown RBP18.63■□□□□ 0.57
PCDHA5-201ENST00000529619 APAF1O14727 1248 aa18.62■□□□□ 0.57
PCDHA5-201ENST00000529619 SPRYD3Q8NCJ5 442 aa18.62■□□□□ 0.57
PCDHA5-201ENST00000529619 CLUAP1Q96AJ1 413 aa18.62■□□□□ 0.57
PCDHA5-201ENST00000529619 SLKQ9H2G2 1235 aaPredicted RBP18.62■□□□□ 0.57
PCDHA5-201ENST00000529619 ESF1Q9H501 851 aaKnown RBP18.61■□□□□ 0.57
PCDHA5-201ENST00000529619 MS4A1P11836 297 aa18.61■□□□□ 0.57
PCDHA5-201ENST00000529619 ADAMTS8Q9UP79 889 aa18.61■□□□□ 0.57
PCDHA5-201ENST00000529619 U2AF1L5P0DN76 240 aaPredicted RBP18.6■□□□□ 0.57
PCDHA5-201ENST00000529619 U2AF1Q01081 240 aaKnown RBP eCLIP18.6■□□□□ 0.57
PCDHA5-201ENST00000529619 CENPQQ7L2Z9 268 aaPredicted RBP18.6■□□□□ 0.57
PCDHA5-201ENST00000529619 RRP7AQ9Y3A4 280 aaKnown RBP18.6■□□□□ 0.57
PCDHA5-201ENST00000529619 ANP32BQ92688 251 aaKnown RBP18.6■□□□□ 0.57
PCDHA5-201ENST00000529619 IQGAP2Q13576 1575 aa18.59■□□□□ 0.57
PCDHA5-201ENST00000529619 RPRD2Q5VT52 1461 aaKnown RBP18.59■□□□□ 0.57
PCDHA5-201ENST00000529619 POGKQ9P215 609 aa18.59■□□□□ 0.57
PCDHA5-201ENST00000529619 MYH16Q9H6N6 1097 aa18.59■□□□□ 0.57
PCDHA5-201ENST00000529619 C9orf84Q5VXU9 1444 aa18.58■□□□□ 0.57
PCDHA5-201ENST00000529619 SRPK2P78362 688 aaKnown RBP18.57■□□□□ 0.56
PCDHA5-201ENST00000529619 CENPJQ9HC77 1338 aaPredicted RBP18.57■□□□□ 0.56
PCDHA5-201ENST00000529619 EIF3AQ14152 1382 aaKnown RBP18.57■□□□□ 0.56
PCDHA5-201ENST00000529619 STK26Q9P289 416 aa18.57■□□□□ 0.56
PCDHA5-201ENST00000529619 TRAK1Q9UPV9 953 aa18.56■□□□□ 0.56
PCDHA5-201ENST00000529619 CFAP43Q8NDM7 1665 aa18.56■□□□□ 0.56
PCDHA5-201ENST00000529619 FAM161AQ3B820 660 aa18.56■□□□□ 0.56
PCDHA5-201ENST00000529619 BCL2L13Q9BXK5 485 aa18.55■□□□□ 0.56
PCDHA5-201ENST00000529619 PLPPR3Q6T4P5 718 aa18.55■□□□□ 0.56
PCDHA5-201ENST00000529619 SNAPC4Q5SXM2 1469 aa18.54■□□□□ 0.56
PCDHA5-201ENST00000529619 NUTM2DQ5VT03 806 aaPredicted RBP18.54■□□□□ 0.56
PCDHA5-201ENST00000529619 USP35Q9P2H5 1018 aa18.53■□□□□ 0.56
PCDHA5-201ENST00000529619 COG6Q9Y2V7 657 aa18.53■□□□□ 0.56
PCDHA5-201ENST00000529619 UGGT2Q9NYU1 1516 aa18.52■□□□□ 0.56
PCDHA5-201ENST00000529619 KIAA0586Q9BVV6 1533 aa18.52■□□□□ 0.56
PCDHA5-201ENST00000529619 MRC2Q9UBG0 1479 aa18.52■□□□□ 0.56
PCDHA5-201ENST00000529619 THOC2Q8NI27 1593 aaKnown RBP18.51■□□□□ 0.55
PCDHA5-201ENST00000529619 LAMC3Q9Y6N6 1575 aa18.51■□□□□ 0.55
PCDHA5-201ENST00000529619 RWDD1Q9H446 243 aaPredicted RBP18.5■□□□□ 0.55
PCDHA5-201ENST00000529619 E9PSI1 815 aa18.5■□□□□ 0.55
PCDHA5-201ENST00000529619 CAMSAP2Q08AD1 1489 aa18.49■□□□□ 0.55
PCDHA5-201ENST00000529619 PLB1Q6P1J6 1458 aa18.49■□□□□ 0.55
PCDHA5-201ENST00000529619 IFT140Q96RY7 1462 aa18.48■□□□□ 0.55
PCDHA5-201ENST00000529619 PPP2R1AP30153 589 aa18.48■□□□□ 0.55
PCDHA5-201ENST00000529619 BACH2Q9BYV9 841 aa18.48■□□□□ 0.55
PCDHA5-201ENST00000529619 ITPRIPQ8IWB1 547 aa18.47■□□□□ 0.55
PCDHA5-201ENST00000529619 PMFBP1Q8TBY8 1022 aa18.47■□□□□ 0.55
PCDHA5-201ENST00000529619 SKAP1Q86WV1 359 aa18.47■□□□□ 0.55
PCDHA5-201ENST00000529619 SMC4Q9NTJ3 1288 aa18.46■□□□□ 0.55
PCDHA5-201ENST00000529619 TRIM44Q96DX7 344 aaPredicted RBP18.45■□□□□ 0.54
PCDHA5-201ENST00000529619 GZF1Q9H116 711 aaPredicted RBP18.45■□□□□ 0.54
PCDHA5-201ENST00000529619 CTTNBP2Q8WZ74 1663 aa18.44■□□□□ 0.54
PCDHA5-201ENST00000529619 WASHC2CQ9Y4E1 1318 aa18.44■□□□□ 0.54
PCDHA5-201ENST00000529619 GSE1Q14687 1217 aa18.44■□□□□ 0.54
PCDHA5-201ENST00000529619 HSCBQ8IWL3 235 aa18.44■□□□□ 0.54
PCDHA5-201ENST00000529619 AFAP1Q8N556 730 aa18.44■□□□□ 0.54
PCDHA5-201ENST00000529619 HSP90AB1P08238 724 aaKnown RBP18.44■□□□□ 0.54
PCDHA5-201ENST00000529619 MFAP1P55081 439 aaKnown RBP18.44■□□□□ 0.54
PCDHA5-201ENST00000529619 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.44■□□□□ 0.54
PCDHA5-201ENST00000529619 CGNL1Q0VF96 1302 aa18.43■□□□□ 0.54
PCDHA5-201ENST00000529619 NCLP19338 710 aaKnown RBP18.43■□□□□ 0.54
PCDHA5-201ENST00000529619 ARHGEF11O15085 1522 aa18.42■□□□□ 0.54
PCDHA5-201ENST00000529619 SYNJ2O15056 1496 aa18.42■□□□□ 0.54
PCDHA5-201ENST00000529619 GOLGA6L22H0YM25 854 aa18.42■□□□□ 0.54
PCDHA5-201ENST00000529619 CFAP70Q5T0N1 1121 aa18.41■□□□□ 0.54
PCDHA5-201ENST00000529619 ARHGAP5Q13017 1502 aa18.41■□□□□ 0.54
PCDHA5-201ENST00000529619 PANK1Q8TE04 598 aa18.41■□□□□ 0.54
PCDHA5-201ENST00000529619 ZNF608Q9ULD9 1512 aaPredicted RBP18.4■□□□□ 0.54
PCDHA5-201ENST00000529619 NFKBIBQ15653 356 aa18.4■□□□□ 0.54
PCDHA5-201ENST00000529619 PNNQ9H307 717 aaKnown RBP18.39■□□□□ 0.54
PCDHA5-201ENST00000529619 ERBINQ96RT1 1412 aa18.38■□□□□ 0.53
PCDHA5-201ENST00000529619 TCOF1Q13428 1488 aaKnown RBP18.38■□□□□ 0.53
PCDHA5-201ENST00000529619 IPO8O15397 1037 aaKnown RBP18.38■□□□□ 0.53
PCDHA5-201ENST00000529619 BCAR3O75815 825 aa18.38■□□□□ 0.53
PCDHA5-201ENST00000529619 C20orf194Q5TEA3 1177 aa18.38■□□□□ 0.53
PCDHA5-201ENST00000529619 L1TD1Q5T7N2 865 aaKnown RBP18.37■□□□□ 0.53
PCDHA5-201ENST00000529619 HDGFL2Q7Z4V5 671 aaPredicted RBP18.36■□□□□ 0.53
PCDHA5-201ENST00000529619 NAP1L5Q96NT1 182 aaPredicted RBP18.35■□□□□ 0.53
PCDHA5-201ENST00000529619 GPATCH8Q9UKJ3 1502 aaKnown RBP18.35■□□□□ 0.53
PCDHA5-201ENST00000529619 GRIN2AQ12879 1464 aa18.35■□□□□ 0.53
PCDHA5-201ENST00000529619 CHMP4BQ9H444 224 aaKnown RBP18.34■□□□□ 0.53
PCDHA5-201ENST00000529619 MAGI1Q96QZ7 1491 aaPredicted RBP18.34■□□□□ 0.53
PCDHA5-201ENST00000529619 SOX12O15370 315 aa18.33■□□□□ 0.53
PCDHA5-201ENST00000529619 APBB1O00213 710 aa18.32■□□□□ 0.52
PCDHA5-201ENST00000529619 TMEM132EQ6IEE7 984 aa18.32■□□□□ 0.52
PCDHA5-201ENST00000529619 NUP153P49790 1475 aaKnown RBP18.32■□□□□ 0.52
PCDHA5-201ENST00000529619 MLECQ14165 292 aa18.32■□□□□ 0.52
PCDHA5-201ENST00000529619 ZKSCAN2Q63HK3 967 aa18.32■□□□□ 0.52
PCDHA5-201ENST00000529619 RUNDC1Q96C34 613 aa18.31■□□□□ 0.52
PCDHA5-201ENST00000529619 PLEKHG5O94827 1062 aa18.31■□□□□ 0.52
PCDHA5-201ENST00000529619 NGEFQ8N5V2 710 aa18.31■□□□□ 0.52
PCDHA5-201ENST00000529619 STAC3Q96MF2 364 aa18.31■□□□□ 0.52
PCDHA5-201ENST00000529619 TERF2IPQ9NYB0 399 aa18.31■□□□□ 0.52
PCDHA5-201ENST00000529619 DHX29Q7Z478 1369 aaKnown RBP18.3■□□□□ 0.52
PCDHA5-201ENST00000529619 TCP11L2Q8N4U5 519 aa18.3■□□□□ 0.52
PCDHA5-201ENST00000529619 IL27Q8NEV9 243 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms