RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 GLI2P10070 1586 aa21.94■■□□□ 1.1
CCDC90B-213ENST00000529611 DHX29Q7Z478 1369 aaKnown RBP21.93■■□□□ 1.1
CCDC90B-213ENST00000529611 PLA2R1Q13018 1463 aa21.93■■□□□ 1.1
CCDC90B-213ENST00000529611 MYT1LQ9UL68 1186 aa21.93■■□□□ 1.1
CCDC90B-213ENST00000529611 EIF2AK4Q9P2K8 1649 aaKnown RBP21.92■■□□□ 1.1
CCDC90B-213ENST00000529611 MLH3Q9UHC1 1453 aa21.9■■□□□ 1.1
CCDC90B-213ENST00000529611 CCDC144AA2RUR9 1427 aa21.89■■□□□ 1.1
CCDC90B-213ENST00000529611 ATP10AO60312 1499 aa21.89■■□□□ 1.09
CCDC90B-213ENST00000529611 HECW2Q9P2P5 1572 aa21.88■■□□□ 1.09
CCDC90B-213ENST00000529611 VWDEQ8N2E2 1590 aa21.88■■□□□ 1.09
CCDC90B-213ENST00000529611 DIP2BQ9P265 1576 aa21.88■■□□□ 1.09
CCDC90B-213ENST00000529611 PRDM15P57071 1507 aaPredicted RBP21.86■■□□□ 1.09
CCDC90B-213ENST00000529611 KIF3BO15066 747 aa21.86■■□□□ 1.09
CCDC90B-213ENST00000529611 HSPA5P11021 654 aaKnown RBP21.86■■□□□ 1.09
CCDC90B-213ENST00000529611 MROH1Q8NDA8 1641 aa21.86■■□□□ 1.09
CCDC90B-213ENST00000529611 EIF4G2P78344 907 aaKnown RBP eCLIP21.85■■□□□ 1.09
CCDC90B-213ENST00000529611 E9PCH4 1651 aa21.85■■□□□ 1.09
CCDC90B-213ENST00000529611 A2MP01023 1474 aa21.85■■□□□ 1.09
CCDC90B-213ENST00000529611 UHRF1BP1Q6BDS2 1440 aa21.85■■□□□ 1.09
CCDC90B-213ENST00000529611 DDX10Q13206 875 aaKnown RBP21.83■■□□□ 1.09
CCDC90B-213ENST00000529611 TET3O43151 1660 aa21.83■■□□□ 1.08
CCDC90B-213ENST00000529611 KANK1Q14678 1352 aa21.83■■□□□ 1.08
CCDC90B-213ENST00000529611 RAPGEF3O95398 923 aa21.82■■□□□ 1.08
CCDC90B-213ENST00000529611 FAM69CQ0P6D2 419 aa21.82■■□□□ 1.08
CCDC90B-213ENST00000529611 FRMPD1Q5SYB0 1578 aa21.82■■□□□ 1.08
CCDC90B-213ENST00000529611 RICTORQ6R327 1708 aa21.81■■□□□ 1.08
CCDC90B-213ENST00000529611 ABCA6Q8N139 1617 aa21.81■■□□□ 1.08
CCDC90B-213ENST00000529611 RNF17Q9BXT8 1623 aaKnown RBP21.79■■□□□ 1.08
CCDC90B-213ENST00000529611 ZNF326Q5BKZ1 582 aaKnown RBP21.79■■□□□ 1.08
CCDC90B-213ENST00000529611 SPATA31E1Q6ZUB1 1445 aa21.78■■□□□ 1.08
CCDC90B-213ENST00000529611 DCAF11Q8TEB1 546 aa21.78■■□□□ 1.08
CCDC90B-213ENST00000529611 RALGAPBQ86X10 1494 aa21.77■■□□□ 1.08
CCDC90B-213ENST00000529611 TRPM2O94759 1503 aa21.77■■□□□ 1.08
CCDC90B-213ENST00000529611 PTPRTO14522 1441 aa21.76■■□□□ 1.07
CCDC90B-213ENST00000529611 SPHKAPQ2M3C7 1700 aa21.76■■□□□ 1.07
CCDC90B-213ENST00000529611 PPRC1Q5VV67 1664 aaKnown RBP21.75■■□□□ 1.07
CCDC90B-213ENST00000529611 BCORL1Q5H9F3 1711 aa21.75■■□□□ 1.07
CCDC90B-213ENST00000529611 DIP2CQ9Y2E4 1556 aa21.75■■□□□ 1.07
CCDC90B-213ENST00000529611 KDM2AQ9Y2K7 1162 aa21.74■■□□□ 1.07
CCDC90B-213ENST00000529611 LMTK2Q8IWU2 1503 aa21.73■■□□□ 1.07
CCDC90B-213ENST00000529611 EFCAB6Q5THR3 1501 aa21.72■■□□□ 1.07
CCDC90B-213ENST00000529611 WASHC2AQ641Q2 1341 aa21.72■■□□□ 1.07
CCDC90B-213ENST00000529611 RGL3Q3MIN7 710 aa21.72■■□□□ 1.07
CCDC90B-213ENST00000529611 TSPOAP1O95153 1857 aa21.72■■□□□ 1.07
CCDC90B-213ENST00000529611 PRAG1Q86YV5 1406 aa21.71■■□□□ 1.07
CCDC90B-213ENST00000529611 CEP152O94986 1710 aa21.7■■□□□ 1.06
CCDC90B-213ENST00000529611 CLTCL1P53675 1640 aa21.69■■□□□ 1.06
CCDC90B-213ENST00000529611 USP47Q96K76 1375 aa21.69■■□□□ 1.06
CCDC90B-213ENST00000529611 YEATS2Q9ULM3 1422 aa21.68■■□□□ 1.06
CCDC90B-213ENST00000529611 ZMYM4Q5VZL5 1548 aa21.68■■□□□ 1.06
CCDC90B-213ENST00000529611 KIF13AQ9H1H9 1805 aa21.67■■□□□ 1.06
CCDC90B-213ENST00000529611 C11orf95C9JLR9 678 aaPredicted RBP21.67■■□□□ 1.06
CCDC90B-213ENST00000529611 TRPM1Q7Z4N2 1603 aa21.66■■□□□ 1.06
CCDC90B-213ENST00000529611 GGT6Q6P531 493 aa21.65■■□□□ 1.06
CCDC90B-213ENST00000529611 CCDC7Q96M83 1385 aa21.65■■□□□ 1.06
CCDC90B-213ENST00000529611 CARD11Q9BXL7 1154 aa21.65■■□□□ 1.06
CCDC90B-213ENST00000529611 POLR1AO95602 1720 aaPredicted RBP21.64■■□□□ 1.05
CCDC90B-213ENST00000529611 YTHDC1Q96MU7 727 aaKnown RBP21.63■■□□□ 1.05
CCDC90B-213ENST00000529611 ABCC3O15438 1527 aa21.62■■□□□ 1.05
CCDC90B-213ENST00000529611 ROCK2O75116 1388 aaKnown RBP21.62■■□□□ 1.05
CCDC90B-213ENST00000529611 NPATQ14207 1427 aa21.6■■□□□ 1.05
CCDC90B-213ENST00000529611 NEURL4Q96JN8 1562 aa21.6■■□□□ 1.05
CCDC90B-213ENST00000529611 UGGT1Q9NYU2 1555 aa21.6■■□□□ 1.05
CCDC90B-213ENST00000529611 CENPBP07199 599 aaPredicted RBP21.59■■□□□ 1.05
CCDC90B-213ENST00000529611 KIF7Q2M1P5 1343 aa21.59■■□□□ 1.05
CCDC90B-213ENST00000529611 GPRASP1Q5JY77 1395 aa21.59■■□□□ 1.05
CCDC90B-213ENST00000529611 WASHC2CQ9Y4E1 1318 aa21.58■■□□□ 1.05
CCDC90B-213ENST00000529611 CAMSAP1Q5T5Y3 1602 aa21.56■■□□□ 1.04
CCDC90B-213ENST00000529611 CNTLNQ9NXG0 1405 aa21.56■■□□□ 1.04
CCDC90B-213ENST00000529611 ANP32CO43423 234 aa21.56■■□□□ 1.04
CCDC90B-213ENST00000529611 LAMC1P11047 1609 aa21.56■■□□□ 1.04
CCDC90B-213ENST00000529611 NBPF1Q3BBV0 1214 aa21.56■■□□□ 1.04
CCDC90B-213ENST00000529611 MADDQ8WXG6 1647 aa21.55■■□□□ 1.04
CCDC90B-213ENST00000529611 STAC3Q96MF2 364 aa21.54■■□□□ 1.04
CCDC90B-213ENST00000529611 KIF1BO60333 1816 aa21.54■■□□□ 1.04
CCDC90B-213ENST00000529611 ZC3H13Q5T200 1668 aaKnown RBP21.53■■□□□ 1.04
CCDC90B-213ENST00000529611 COL17A1Q9UMD9 1497 aaPredicted RBP21.52■■□□□ 1.04
CCDC90B-213ENST00000529611 REREQ9P2R6 1566 aa21.52■■□□□ 1.04
CCDC90B-213ENST00000529611 ST20-MTHFSA0A0A6YYL1 179 aa21.52■■□□□ 1.04
CCDC90B-213ENST00000529611 CFAP65Q6ZU64 1925 aaKnown RBP21.51■■□□□ 1.03
CCDC90B-213ENST00000529611 ARID4BQ4LE39 1312 aaPredicted RBP21.5■■□□□ 1.03
CCDC90B-213ENST00000529611 MROH2AA6NES4 1674 aa21.5■■□□□ 1.03
CCDC90B-213ENST00000529611 ARHGAP31Q2M1Z3 1444 aa21.5■■□□□ 1.03
CCDC90B-213ENST00000529611 SIGLEC1Q9BZZ2 1709 aa21.5■■□□□ 1.03
CCDC90B-213ENST00000529611 NOS1P29475 1434 aa21.49■■□□□ 1.03
CCDC90B-213ENST00000529611 ADGRB3O60242 1522 aa21.49■■□□□ 1.03
CCDC90B-213ENST00000529611 CCER2I3L3R5 266 aa21.48■■□□□ 1.03
CCDC90B-213ENST00000529611 AGLP35573 1532 aa21.47■■□□□ 1.03
CCDC90B-213ENST00000529611 IFT172Q9UG01 1749 aa21.46■■□□□ 1.03
CCDC90B-213ENST00000529611 MYOM2P54296 1465 aa21.46■■□□□ 1.03
CCDC90B-213ENST00000529611 ARHGEF40Q8TER5 1519 aa21.44■■□□□ 1.02
CCDC90B-213ENST00000529611 SYNMO15061 1565 aa21.44■■□□□ 1.02
CCDC90B-213ENST00000529611 PIK3C2BO00750 1634 aa21.43■■□□□ 1.02
CCDC90B-213ENST00000529611 KIAA1210Q9ULL0 1709 aa21.41■■□□□ 1.02
CCDC90B-213ENST00000529611 IQGAP1P46940 1657 aa21.4■■□□□ 1.02
CCDC90B-213ENST00000529611 POLR3GLQ9BT43 218 aa21.4■■□□□ 1.02
CCDC90B-213ENST00000529611 NRXN1Q9ULB1 1477 aa21.4■■□□□ 1.02
CCDC90B-213ENST00000529611 ADGRF5Q8IZF2 1346 aa21.39■■□□□ 1.02
CCDC90B-213ENST00000529611 CHGAP10645 457 aaKnown RBP21.39■■□□□ 1.01
CCDC90B-213ENST00000529611 TESK2Q96S53 571 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms