RNA–Protein interactions for RNA: ENST00000529520.5

GPATCH4-214, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-214ENST00000529520 TSPY4P0CV99 314 aa12.99□□□□□ -0.33
GPATCH4-214ENST00000529520 TSPY10P0CW01 314 aa12.99□□□□□ -0.33
GPATCH4-214ENST00000529520 MAP3K1Q13233 1512 aa12.98□□□□□ -0.33
GPATCH4-214ENST00000529520 ZNF335Q9H4Z2 1342 aaPredicted RBP12.97□□□□□ -0.33
GPATCH4-214ENST00000529520 WASHC2CQ9Y4E1 1318 aa12.97□□□□□ -0.33
GPATCH4-214ENST00000529520 MAST1Q9Y2H9 1570 aa12.97□□□□□ -0.33
GPATCH4-214ENST00000529520 KDM5DQ9BY66 1539 aa12.97□□□□□ -0.33
GPATCH4-214ENST00000529520 TCOF1Q13428 1488 aaKnown RBP12.97□□□□□ -0.33
GPATCH4-214ENST00000529520 A2ML1A8K2U0 1454 aa12.96□□□□□ -0.34
GPATCH4-214ENST00000529520 PLA2R1Q13018 1463 aa12.96□□□□□ -0.34
GPATCH4-214ENST00000529520 MYOM3Q5VTT5 1437 aa12.96□□□□□ -0.34
GPATCH4-214ENST00000529520 PKD2Q13563 968 aa12.95□□□□□ -0.34
GPATCH4-214ENST00000529520 PZPP20742 1482 aa12.95□□□□□ -0.34
GPATCH4-214ENST00000529520 TNRQ92752 1358 aa12.94□□□□□ -0.34
GPATCH4-214ENST00000529520 CEP152O94986 1710 aa12.94□□□□□ -0.34
GPATCH4-214ENST00000529520 POLR1AO95602 1720 aaPredicted RBP12.94□□□□□ -0.34
GPATCH4-214ENST00000529520 MROH1Q8NDA8 1641 aa12.94□□□□□ -0.34
GPATCH4-214ENST00000529520 RNF17Q9BXT8 1623 aaKnown RBP12.94□□□□□ -0.34
GPATCH4-214ENST00000529520 MIA2Q96PC5 1412 aa12.94□□□□□ -0.34
GPATCH4-214ENST00000529520 NEURL4Q96JN8 1562 aa12.92□□□□□ -0.34
GPATCH4-214ENST00000529520 ABCC3O15438 1527 aa12.92□□□□□ -0.34
GPATCH4-214ENST00000529520 PTPN23Q9H3S7 1636 aa12.91□□□□□ -0.34
GPATCH4-214ENST00000529520 CROCC2H7BZ55 1655 aa12.91□□□□□ -0.34
GPATCH4-214ENST00000529520 FAM135AQ9P2D6 1515 aa12.91□□□□□ -0.34
GPATCH4-214ENST00000529520 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.91□□□□□ -0.34
GPATCH4-214ENST00000529520 EIF2AK4Q9P2K8 1649 aaKnown RBP12.91□□□□□ -0.34
GPATCH4-214ENST00000529520 ABCC5O15440 1437 aa12.9□□□□□ -0.34
GPATCH4-214ENST00000529520 RRP7BPQ9NSQ0 103 aa12.89□□□□□ -0.35
GPATCH4-214ENST00000529520 IQSEC2Q5JU85 1478 aa12.89□□□□□ -0.35
GPATCH4-214ENST00000529520 ZC3H13Q5T200 1668 aaKnown RBP12.89□□□□□ -0.35
GPATCH4-214ENST00000529520 SPATA31D1Q6ZQQ2 1576 aa12.88□□□□□ -0.35
GPATCH4-214ENST00000529520 UGGT1Q9NYU2 1555 aa12.88□□□□□ -0.35
GPATCH4-214ENST00000529520 DUOX2Q9NRD8 1548 aa12.88□□□□□ -0.35
GPATCH4-214ENST00000529520 APLP2Q06481 763 aa12.87□□□□□ -0.35
GPATCH4-214ENST00000529520 NLRP1Q9C000 1473 aa12.86□□□□□ -0.35
GPATCH4-214ENST00000529520 THEMISQ8N1K5 641 aaPredicted RBP12.86□□□□□ -0.35
GPATCH4-214ENST00000529520 CHIC2Q9UKJ5 165 aa12.86□□□□□ -0.35
GPATCH4-214ENST00000529520 STRCP1A6NGW2 1772 aa12.86□□□□□ -0.35
GPATCH4-214ENST00000529520 DAPK1P53355 1430 aa12.86□□□□□ -0.35
GPATCH4-214ENST00000529520 ERVK-7P63135 1459 aa12.85□□□□□ -0.35
GPATCH4-214ENST00000529520 UBR1Q8IWV7 1749 aa12.85□□□□□ -0.35
GPATCH4-214ENST00000529520 KIF15Q9NS87 1388 aa12.85□□□□□ -0.35
GPATCH4-214ENST00000529520 UBAP1LF5GYI3 381 aa12.85□□□□□ -0.35
GPATCH4-214ENST00000529520 ILDR2Q71H61 639 aa12.85□□□□□ -0.35
GPATCH4-214ENST00000529520 ANKLE2Q86XL3 938 aa12.85□□□□□ -0.35
GPATCH4-214ENST00000529520 FGD6Q6ZV73 1430 aa12.85□□□□□ -0.35
GPATCH4-214ENST00000529520 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.84□□□□□ -0.357e-7■■□□□ 12.5
GPATCH4-214ENST00000529520 VWDEQ8N2E2 1590 aa12.84□□□□□ -0.35
GPATCH4-214ENST00000529520 SHANK2Q9UPX8 1470 aa12.84□□□□□ -0.35
GPATCH4-214ENST00000529520 DEPDC5O75140 1603 aa12.83□□□□□ -0.36
GPATCH4-214ENST00000529520 IQGAP1P46940 1657 aa12.83□□□□□ -0.36
GPATCH4-214ENST00000529520 PRDM15P57071 1507 aaPredicted RBP12.83□□□□□ -0.36
GPATCH4-214ENST00000529520 DISP3Q9P2K9 1392 aa12.82□□□□□ -0.36
GPATCH4-214ENST00000529520 NPHP4O75161 1426 aaPredicted RBP12.82□□□□□ -0.36
GPATCH4-214ENST00000529520 MED14O60244 1454 aa12.82□□□□□ -0.36
GPATCH4-214ENST00000529520 ERBINQ96RT1 1412 aa12.8□□□□□ -0.36
GPATCH4-214ENST00000529520 LTKP29376 864 aa12.8□□□□□ -0.36
GPATCH4-214ENST00000529520 PIK3C2BO00750 1634 aa12.79□□□□□ -0.36
GPATCH4-214ENST00000529520 ARHGAP31Q2M1Z3 1444 aa12.79□□□□□ -0.36
GPATCH4-214ENST00000529520 CPS1P31327 1500 aa12.78□□□□□ -0.36
GPATCH4-214ENST00000529520 ALKQ9UM73 1620 aa12.78□□□□□ -0.36
GPATCH4-214ENST00000529520 PIP4K2BP78356 416 aa12.77□□□□□ -0.37
GPATCH4-214ENST00000529520 FAM50AQ14320 339 aaKnown RBP12.77□□□□□ -0.37
GPATCH4-214ENST00000529520 ANKRD30AQ9BXX3 1397 aa12.77□□□□□ -0.37
GPATCH4-214ENST00000529520 XIRP1Q702N8 1843 aaKnown RBP12.76□□□□□ -0.37
GPATCH4-214ENST00000529520 ARHGAP23Q9P227 1491 aa12.76□□□□□ -0.37
GPATCH4-214ENST00000529520 SYNMO15061 1565 aa12.75□□□□□ -0.37
GPATCH4-214ENST00000529520 HSPA1LP34931 641 aa12.75□□□□□ -0.37
GPATCH4-214ENST00000529520 IDI1Q13907 227 aa12.75□□□□□ -0.37
GPATCH4-214ENST00000529520 TXNDC2Q86VQ3 553 aa12.75□□□□□ -0.37
GPATCH4-214ENST00000529520 SCAF1Q9H7N4 1312 aaKnown RBP12.75□□□□□ -0.37
GPATCH4-214ENST00000529520 MYO5BQ9ULV0 1848 aa12.75□□□□□ -0.37
GPATCH4-214ENST00000529520 SLIT1O75093 1534 aa12.74□□□□□ -0.37
GPATCH4-214ENST00000529520 LMTK2Q8IWU2 1503 aa12.74□□□□□ -0.37
GPATCH4-214ENST00000529520 ADGRL2O95490 1459 aa12.74□□□□□ -0.37
GPATCH4-214ENST00000529520 LRRC7Q96NW7 1537 aa12.73□□□□□ -0.37
GPATCH4-214ENST00000529520 SCAF11Q99590 1463 aaKnown RBP12.73□□□□□ -0.37
GPATCH4-214ENST00000529520 KANK1Q14678 1352 aa12.73□□□□□ -0.37
GPATCH4-214ENST00000529520 TOM1O60784 492 aa12.73□□□□□ -0.37
GPATCH4-214ENST00000529520 PPARGC1BQ86YN6 1023 aaKnown RBP12.73□□□□□ -0.37
GPATCH4-214ENST00000529520 EFCAB6Q5THR3 1501 aa12.71□□□□□ -0.38
GPATCH4-214ENST00000529520 NOS1P29475 1434 aa12.71□□□□□ -0.38
GPATCH4-214ENST00000529520 KDM5AP29375 1690 aaKnown RBP12.7□□□□□ -0.38
GPATCH4-214ENST00000529520 TMEM2Q9UHN6 1383 aa12.7□□□□□ -0.38
GPATCH4-214ENST00000529520 ANKRD50Q9ULJ7 1429 aa12.7□□□□□ -0.38
GPATCH4-214ENST00000529520 SENP3Q9H4L4 574 aaPredicted RBP12.69□□□□□ -0.38
GPATCH4-214ENST00000529520 STAG3Q9UJ98 1225 aa12.69□□□□□ -0.38
GPATCH4-214ENST00000529520 TET3O43151 1660 aa12.68□□□□□ -0.38
GPATCH4-214ENST00000529520 EID1Q9Y6B2 187 aa12.68□□□□□ -0.38
GPATCH4-214ENST00000529520 SOCS7O14512 581 aa12.67□□□□□ -0.38
GPATCH4-214ENST00000529520 SLC26A8Q96RN1 970 aa12.67□□□□□ -0.38
GPATCH4-214ENST00000529520 GCC2Q8IWJ2 1684 aa12.67□□□□□ -0.38
GPATCH4-214ENST00000529520 RBM33Q96EV2 1170 aaKnown RBP12.66□□□□□ -0.38
GPATCH4-214ENST00000529520 E9PCH4 1651 aa12.66□□□□□ -0.38
GPATCH4-214ENST00000529520 UNC13BO14795 1591 aa12.65□□□□□ -0.38
GPATCH4-214ENST00000529520 ITGAEP38570 1179 aa12.65□□□□□ -0.38
GPATCH4-214ENST00000529520 ADGRB3O60242 1522 aa12.65□□□□□ -0.38
GPATCH4-214ENST00000529520 MED1Q15648 1581 aaPredicted RBP12.64□□□□□ -0.39
GPATCH4-214ENST00000529520 TMEM131LA2VDJ0 1609 aa12.64□□□□□ -0.39
GPATCH4-214ENST00000529520 SLC52A1Q9NWF4 448 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms