RNA–Protein interactions for RNA: ENST00000529477.5

PTP4A2-212, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-212ENST00000529477 ZNF142P52746 1687 aaPredicted RBP29.5■■■□□ 2.31
PTP4A2-212ENST00000529477 MAST1Q9Y2H9 1570 aa29.49■■■□□ 2.31
PTP4A2-212ENST00000529477 GGT6Q6P531 493 aa29.46■■■□□ 2.31
PTP4A2-212ENST00000529477 TCOF1Q13428 1488 aaKnown RBP29.46■■■□□ 2.31
PTP4A2-212ENST00000529477 MYO3AQ8NEV4 1616 aa29.45■■■□□ 2.3
PTP4A2-212ENST00000529477 CLTCQ00610 1675 aaKnown RBP29.43■■■□□ 2.3
PTP4A2-212ENST00000529477 ZMYM3Q14202 1370 aa29.42■■■□□ 2.3
PTP4A2-212ENST00000529477 CROCC2H7BZ55 1655 aa29.42■■■□□ 2.3
PTP4A2-212ENST00000529477 PPP6R1Q9UPN7 881 aa29.42■■■□□ 2.3
PTP4A2-212ENST00000529477 KIF3BO15066 747 aa29.41■■■□□ 2.3
PTP4A2-212ENST00000529477 DNMT1P26358 1616 aaKnown RBP29.41■■■□□ 2.3
PTP4A2-212ENST00000529477 PLA2R1Q13018 1463 aa29.41■■■□□ 2.3
PTP4A2-212ENST00000529477 SHANK2Q9UPX8 1470 aa29.41■■■□□ 2.3
PTP4A2-212ENST00000529477 FAM50AQ14320 339 aaKnown RBP29.39■■■□□ 2.3
PTP4A2-212ENST00000529477 ABCC5O15440 1437 aa29.38■■■□□ 2.29
PTP4A2-212ENST00000529477 DAPK1P53355 1430 aa29.38■■■□□ 2.29
PTP4A2-212ENST00000529477 CEP170BQ9Y4F5 1589 aaPredicted RBP29.37■■■□□ 2.29
PTP4A2-212ENST00000529477 PTPRKQ15262 1439 aa29.34■■■□□ 2.29
PTP4A2-212ENST00000529477 DUOX2Q9NRD8 1548 aa29.32■■■□□ 2.28
PTP4A2-212ENST00000529477 PPARGC1BQ86YN6 1023 aaKnown RBP29.32■■■□□ 2.28
PTP4A2-212ENST00000529477 ZNF335Q9H4Z2 1342 aaPredicted RBP29.31■■■□□ 2.28
PTP4A2-212ENST00000529477 EIF2AK4Q9P2K8 1649 aaKnown RBP29.31■■■□□ 2.28
PTP4A2-212ENST00000529477 KIF15Q9NS87 1388 aa29.3■■■□□ 2.28
PTP4A2-212ENST00000529477 NCKAP5LQ9HCH0 1330 aa29.3■■■□□ 2.28
PTP4A2-212ENST00000529477 FAM135AQ9P2D6 1515 aa29.3■■■□□ 2.28
PTP4A2-212ENST00000529477 ANKRD30AQ9BXX3 1397 aa29.28■■■□□ 2.28
PTP4A2-212ENST00000529477 PKD2Q13563 968 aa29.28■■■□□ 2.28
PTP4A2-212ENST00000529477 RRP7BPQ9NSQ0 103 aa29.28■■■□□ 2.28
PTP4A2-212ENST00000529477 CHIC2Q9UKJ5 165 aa29.27■■■□□ 2.28
PTP4A2-212ENST00000529477 WASHC2CQ9Y4E1 1318 aa29.26■■■□□ 2.27
PTP4A2-212ENST00000529477 KDM5DQ9BY66 1539 aa29.25■■■□□ 2.27
PTP4A2-212ENST00000529477 RNF17Q9BXT8 1623 aaKnown RBP29.24■■■□□ 2.27
PTP4A2-212ENST00000529477 ERBINQ96RT1 1412 aa29.23■■■□□ 2.27
PTP4A2-212ENST00000529477 UBAP1LF5GYI3 381 aa29.2■■■□□ 2.26
PTP4A2-212ENST00000529477 A2ML1A8K2U0 1454 aa29.2■■■□□ 2.26
PTP4A2-212ENST00000529477 POLR1AO95602 1720 aaPredicted RBP29.2■■■□□ 2.26
PTP4A2-212ENST00000529477 ADGRL2O95490 1459 aa29.17■■■□□ 2.26
PTP4A2-212ENST00000529477 ZC3H13Q5T200 1668 aaKnown RBP29.17■■■□□ 2.26
PTP4A2-212ENST00000529477 NEURL4Q96JN8 1562 aa29.14■■■□□ 2.26
PTP4A2-212ENST00000529477 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.13■■■□□ 2.258e-10■■□□□ 14.3
PTP4A2-212ENST00000529477 PZPP20742 1482 aa29.11■■■□□ 2.25
PTP4A2-212ENST00000529477 ABCC3O15438 1527 aa29.1■■■□□ 2.25
PTP4A2-212ENST00000529477 MROH1Q8NDA8 1641 aa29.1■■■□□ 2.25
PTP4A2-212ENST00000529477 KANK1Q14678 1352 aa29.1■■■□□ 2.25
PTP4A2-212ENST00000529477 CPS1P31327 1500 aa29.1■■■□□ 2.25
PTP4A2-212ENST00000529477 PRDM15P57071 1507 aaPredicted RBP29.09■■■□□ 2.25
PTP4A2-212ENST00000529477 ITGAEP38570 1179 aa29.08■■■□□ 2.25
PTP4A2-212ENST00000529477 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.08■■■□□ 2.25
PTP4A2-212ENST00000529477 CEP152O94986 1710 aa29.07■■■□□ 2.24
PTP4A2-212ENST00000529477 DEPDC5O75140 1603 aa29.06■■■□□ 2.24
PTP4A2-212ENST00000529477 MED1Q15648 1581 aaPredicted RBP29.05■■■□□ 2.24
PTP4A2-212ENST00000529477 ANKRD50Q9ULJ7 1429 aa29.04■■■□□ 2.24
PTP4A2-212ENST00000529477 ROCK1Q13464 1354 aa29.04■■■□□ 2.24
PTP4A2-212ENST00000529477 TNRQ92752 1358 aa29.04■■■□□ 2.24
PTP4A2-212ENST00000529477 RRBP1Q9P2E9 1410 aaKnown RBP29.03■■■□□ 2.24
PTP4A2-212ENST00000529477 FBXO31Q5XUX0 539 aaPredicted RBP29.03■■■□□ 2.24
PTP4A2-212ENST00000529477 VWDEQ8N2E2 1590 aa28.99■■■□□ 2.23
PTP4A2-212ENST00000529477 CFAP65Q6ZU64 1925 aaKnown RBP28.96■■■□□ 2.23
PTP4A2-212ENST00000529477 HSPA1LP34931 641 aa28.96■■■□□ 2.23
PTP4A2-212ENST00000529477 ALKQ9UM73 1620 aa28.95■■■□□ 2.23
PTP4A2-212ENST00000529477 MED14O60244 1454 aa28.94■■■□□ 2.22
PTP4A2-212ENST00000529477 NLRP1Q9C000 1473 aa28.94■■■□□ 2.22
PTP4A2-212ENST00000529477 ARHGAP31Q2M1Z3 1444 aa28.94■■■□□ 2.22
PTP4A2-212ENST00000529477 TOM1O60784 492 aa28.93■■■□□ 2.22
PTP4A2-212ENST00000529477 ERVK-7P63135 1459 aa28.92■■■□□ 2.22
PTP4A2-212ENST00000529477 UGGT1Q9NYU2 1555 aa28.91■■■□□ 2.22
PTP4A2-212ENST00000529477 LMTK2Q8IWU2 1503 aa28.9■■■□□ 2.22
PTP4A2-212ENST00000529477 IQGAP1P46940 1657 aa28.89■■■□□ 2.21
PTP4A2-212ENST00000529477 PIP4K2BP78356 416 aa28.88■■■□□ 2.21
PTP4A2-212ENST00000529477 SCAF1Q9H7N4 1312 aaKnown RBP28.88■■■□□ 2.21
PTP4A2-212ENST00000529477 ANKLE2Q86XL3 938 aa28.87■■■□□ 2.21
PTP4A2-212ENST00000529477 NPHP4O75161 1426 aaPredicted RBP28.86■■■□□ 2.21
PTP4A2-212ENST00000529477 UNC13BO14795 1591 aa28.86■■■□□ 2.21
PTP4A2-212ENST00000529477 STRCP1A6NGW2 1772 aa28.85■■■□□ 2.21
PTP4A2-212ENST00000529477 THEMISQ8N1K5 641 aaPredicted RBP28.85■■■□□ 2.21
PTP4A2-212ENST00000529477 EFCAB6Q5THR3 1501 aa28.84■■■□□ 2.21
PTP4A2-212ENST00000529477 SYNMO15061 1565 aa28.82■■■□□ 2.2
PTP4A2-212ENST00000529477 TET3O43151 1660 aa28.8■■■□□ 2.2
PTP4A2-212ENST00000529477 RPRD2Q5VT52 1461 aaKnown RBP28.78■■■□□ 2.2
PTP4A2-212ENST00000529477 GCC2Q8IWJ2 1684 aa28.77■■■□□ 2.2
PTP4A2-212ENST00000529477 NUP155O75694 1391 aa28.76■■■□□ 2.2
PTP4A2-212ENST00000529477 LRRC7Q96NW7 1537 aa28.76■■■□□ 2.19
PTP4A2-212ENST00000529477 IQGAP3Q86VI3 1631 aa28.75■■■□□ 2.19
PTP4A2-212ENST00000529477 STAG3Q9UJ98 1225 aa28.73■■■□□ 2.19
PTP4A2-212ENST00000529477 UBR1Q8IWV7 1749 aa28.72■■■□□ 2.19
PTP4A2-212ENST00000529477 NAIPQ13075 1403 aa28.72■■■□□ 2.19
PTP4A2-212ENST00000529477 NOS1P29475 1434 aa28.7■■■□□ 2.19
PTP4A2-212ENST00000529477 HFM1A2PYH4 1435 aa28.69■■■□□ 2.18
PTP4A2-212ENST00000529477 SLC52A1Q9NWF4 448 aa28.68■■■□□ 2.18
PTP4A2-212ENST00000529477 PIK3C2BO00750 1634 aa28.68■■■□□ 2.18
PTP4A2-212ENST00000529477 E9PCH4 1651 aa28.66■■■□□ 2.18
PTP4A2-212ENST00000529477 IDI1Q13907 227 aa28.65■■■□□ 2.18
PTP4A2-212ENST00000529477 PHF23Q9BUL5 403 aaPredicted RBP28.65■■■□□ 2.18
PTP4A2-212ENST00000529477 KDM5AP29375 1690 aaKnown RBP28.64■■■□□ 2.18
PTP4A2-212ENST00000529477 XIRP1Q702N8 1843 aaKnown RBP28.64■■■□□ 2.17
PTP4A2-212ENST00000529477 SCAF11Q99590 1463 aaKnown RBP28.62■■■□□ 2.17
PTP4A2-212ENST00000529477 SLIT1O75093 1534 aa28.62■■■□□ 2.17
PTP4A2-212ENST00000529477 ARHGAP23Q9P227 1491 aa28.61■■■□□ 2.17
PTP4A2-212ENST00000529477 EID1Q9Y6B2 187 aa28.61■■■□□ 2.17
PTP4A2-212ENST00000529477 TRIM52Q96A61 297 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms