RNA–Protein interactions for RNA: ENST00000529312.5

CCDC90B-212, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-212ENST00000529312 ABCA6Q8N139 1617 aa12.19□□□□□ -0.46
CCDC90B-212ENST00000529312 ATP7AQ04656 1500 aa12.19□□□□□ -0.46
CCDC90B-212ENST00000529312 WASHC2CQ9Y4E1 1318 aa12.18□□□□□ -0.46
CCDC90B-212ENST00000529312 SUPT6HQ7KZ85 1726 aaKnown RBP12.18□□□□□ -0.46
CCDC90B-212ENST00000529312 CERKQ8TCT0 537 aa12.18□□□□□ -0.46
CCDC90B-212ENST00000529312 NPATQ14207 1427 aa12.18□□□□□ -0.46
CCDC90B-212ENST00000529312 TIAM1Q13009 1591 aa12.18□□□□□ -0.46
CCDC90B-212ENST00000529312 MIA2Q96PC5 1412 aa12.17□□□□□ -0.46
CCDC90B-212ENST00000529312 CCDC141Q6ZP82 1450 aa12.16□□□□□ -0.46
CCDC90B-212ENST00000529312 PKD2Q13563 968 aa12.15□□□□□ -0.46
CCDC90B-212ENST00000529312 CAMSAP2Q08AD1 1489 aa12.14□□□□□ -0.47
CCDC90B-212ENST00000529312 MYOM3Q5VTT5 1437 aa12.13□□□□□ -0.47
CCDC90B-212ENST00000529312 PREX1Q8TCU6 1659 aa12.13□□□□□ -0.47
CCDC90B-212ENST00000529312 PTPRTO14522 1441 aa12.12□□□□□ -0.47
CCDC90B-212ENST00000529312 THEMISQ8N1K5 641 aaPredicted RBP12.12□□□□□ -0.47
CCDC90B-212ENST00000529312 ADGBQ8N7X0 1667 aa12.11□□□□□ -0.47
CCDC90B-212ENST00000529312 INO80Q9ULG1 1556 aaPredicted RBP12.11□□□□□ -0.47
CCDC90B-212ENST00000529312 PTPRKQ15262 1439 aa12.1□□□□□ -0.47
CCDC90B-212ENST00000529312 C3P01024 1663 aa12.1□□□□□ -0.47
CCDC90B-212ENST00000529312 ARHGEF5Q12774 1597 aa12.09□□□□□ -0.47
CCDC90B-212ENST00000529312 FBXO31Q5XUX0 539 aaPredicted RBP12.09□□□□□ -0.47
CCDC90B-212ENST00000529312 PLXNC1O60486 1568 aa12.09□□□□□ -0.47
CCDC90B-212ENST00000529312 NCKAP5LQ9HCH0 1330 aa12.09□□□□□ -0.47
CCDC90B-212ENST00000529312 MROH2AA6NES4 1674 aa12.08□□□□□ -0.48
CCDC90B-212ENST00000529312 ANKLE2Q86XL3 938 aa12.08□□□□□ -0.48
CCDC90B-212ENST00000529312 RRP7BPQ9NSQ0 103 aa12.08□□□□□ -0.48
CCDC90B-212ENST00000529312 TNRQ92752 1358 aa12.06□□□□□ -0.48
CCDC90B-212ENST00000529312 FAM135AQ9P2D6 1515 aa12.06□□□□□ -0.48
CCDC90B-212ENST00000529312 NCOA1Q15788 1441 aa12.05□□□□□ -0.48
CCDC90B-212ENST00000529312 ANKRD30AQ9BXX3 1397 aa12.05□□□□□ -0.48
CCDC90B-212ENST00000529312 CLTCQ00610 1675 aaKnown RBP12.04□□□□□ -0.48
CCDC90B-212ENST00000529312 FAM50AQ14320 339 aaKnown RBP12.04□□□□□ -0.48
CCDC90B-212ENST00000529312 CHIC2Q9UKJ5 165 aa12.04□□□□□ -0.48
CCDC90B-212ENST00000529312 KANK1Q14678 1352 aa12.04□□□□□ -0.48
CCDC90B-212ENST00000529312 ABCC5O15440 1437 aa12.03□□□□□ -0.48
CCDC90B-212ENST00000529312 A2ML1A8K2U0 1454 aa12.02□□□□□ -0.48
CCDC90B-212ENST00000529312 KIF15Q9NS87 1388 aa12.02□□□□□ -0.49
CCDC90B-212ENST00000529312 STRCQ7RTU9 1775 aa12.02□□□□□ -0.49
CCDC90B-212ENST00000529312 PZPP20742 1482 aa12.02□□□□□ -0.49
CCDC90B-212ENST00000529312 PLA2R1Q13018 1463 aa12.02□□□□□ -0.49
CCDC90B-212ENST00000529312 MAST1Q9Y2H9 1570 aa12.01□□□□□ -0.49
CCDC90B-212ENST00000529312 CAMSAP1Q5T5Y3 1602 aa12.01□□□□□ -0.49
CCDC90B-212ENST00000529312 ZNF219Q9P2Y4 722 aaPredicted RBP12.01□□□□□ -0.49
CCDC90B-212ENST00000529312 FGD6Q6ZV73 1430 aa12.01□□□□□ -0.49
CCDC90B-212ENST00000529312 KDM5DQ9BY66 1539 aa12.01□□□□□ -0.49
CCDC90B-212ENST00000529312 DUOX2Q9NRD8 1548 aa12.01□□□□□ -0.49
CCDC90B-212ENST00000529312 STAG3Q9UJ98 1225 aa11.99□□□□□ -0.49
CCDC90B-212ENST00000529312 DAPK1P53355 1430 aa11.99□□□□□ -0.49
CCDC90B-212ENST00000529312 NLRP1Q9C000 1473 aa11.99□□□□□ -0.49
CCDC90B-212ENST00000529312 PTPN23Q9H3S7 1636 aa11.97□□□□□ -0.49
CCDC90B-212ENST00000529312 CEP170BQ9Y4F5 1589 aaPredicted RBP11.97□□□□□ -0.49
CCDC90B-212ENST00000529312 TCOF1Q13428 1488 aaKnown RBP11.97□□□□□ -0.49
CCDC90B-212ENST00000529312 SHANK2Q9UPX8 1470 aa11.97□□□□□ -0.49
CCDC90B-212ENST00000529312 ERBINQ96RT1 1412 aa11.97□□□□□ -0.49
CCDC90B-212ENST00000529312 EID1Q9Y6B2 187 aa11.97□□□□□ -0.49
CCDC90B-212ENST00000529312 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.96□□□□□ -0.49
CCDC90B-212ENST00000529312 ZNF335Q9H4Z2 1342 aaPredicted RBP11.96□□□□□ -0.49
CCDC90B-212ENST00000529312 HDGFP51858 240 aaKnown RBP11.96□□□□□ -0.49
CCDC90B-212ENST00000529312 IQSEC2Q5JU85 1478 aa11.95□□□□□ -0.5
CCDC90B-212ENST00000529312 UBAP1LF5GYI3 381 aa11.95□□□□□ -0.5
CCDC90B-212ENST00000529312 TOM1O60784 492 aa11.95□□□□□ -0.5
CCDC90B-212ENST00000529312 TXNDC2Q86VQ3 553 aa11.95□□□□□ -0.5
CCDC90B-212ENST00000529312 ARHGAP31Q2M1Z3 1444 aa11.94□□□□□ -0.5
CCDC90B-212ENST00000529312 EIF2AK4Q9P2K8 1649 aaKnown RBP11.94□□□□□ -0.5
CCDC90B-212ENST00000529312 ABCB7O75027 752 aa11.94□□□□□ -0.5
CCDC90B-212ENST00000529312 SLC52A1Q9NWF4 448 aa11.94□□□□□ -0.5
CCDC90B-212ENST00000529312 DNMT1P26358 1616 aaKnown RBP11.93□□□□□ -0.5
CCDC90B-212ENST00000529312 ABCC3O15438 1527 aa11.93□□□□□ -0.5
CCDC90B-212ENST00000529312 MYO3AQ8NEV4 1616 aa11.93□□□□□ -0.5
CCDC90B-212ENST00000529312 UGGT1Q9NYU2 1555 aa11.92□□□□□ -0.5
CCDC90B-212ENST00000529312 IDI1Q13907 227 aa11.92□□□□□ -0.5
CCDC90B-212ENST00000529312 RBM42Q9BTD8 480 aaKnown RBP11.92□□□□□ -0.5
CCDC90B-212ENST00000529312 RNF17Q9BXT8 1623 aaKnown RBP11.92□□□□□ -0.5
CCDC90B-212ENST00000529312 ZNF142P52746 1687 aaPredicted RBP11.91□□□□□ -0.5
CCDC90B-212ENST00000529312 LTBP4Q8N2S1 1624 aa11.91□□□□□ -0.5
CCDC90B-212ENST00000529312 ERVK-7P63135 1459 aa11.9□□□□□ -0.5
CCDC90B-212ENST00000529312 NPHP4O75161 1426 aaPredicted RBP11.9□□□□□ -0.5
CCDC90B-212ENST00000529312 ANKRD50Q9ULJ7 1429 aa11.9□□□□□ -0.5
CCDC90B-212ENST00000529312 ZC3H13Q5T200 1668 aaKnown RBP11.9□□□□□ -0.5
CCDC90B-212ENST00000529312 SPATA31D1Q6ZQQ2 1576 aa11.89□□□□□ -0.51
CCDC90B-212ENST00000529312 ITGAEP38570 1179 aa11.89□□□□□ -0.51
CCDC90B-212ENST00000529312 MED14O60244 1454 aa11.89□□□□□ -0.51
CCDC90B-212ENST00000529312 CFAP65Q6ZU64 1925 aaKnown RBP11.88□□□□□ -0.51
CCDC90B-212ENST00000529312 SLC4A2P04920 1241 aa11.88□□□□□ -0.51
CCDC90B-212ENST00000529312 LTKP29376 864 aa11.88□□□□□ -0.51
CCDC90B-212ENST00000529312 PPARGC1BQ86YN6 1023 aaKnown RBP11.88□□□□□ -0.51
CCDC90B-212ENST00000529312 ROCK1Q13464 1354 aa11.88□□□□□ -0.51
CCDC90B-212ENST00000529312 ADGRL2O95490 1459 aa11.88□□□□□ -0.51
CCDC90B-212ENST00000529312 BCANQ96GW7 911 aa11.87□□□□□ -0.51
CCDC90B-212ENST00000529312 CPS1P31327 1500 aa11.86□□□□□ -0.51
CCDC90B-212ENST00000529312 TMEM2Q9UHN6 1383 aa11.85□□□□□ -0.51
CCDC90B-212ENST00000529312 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.85□□□□□ -0.51
CCDC90B-212ENST00000529312 PRDM15P57071 1507 aaPredicted RBP11.85□□□□□ -0.51
CCDC90B-212ENST00000529312 LMTK2Q8IWU2 1503 aa11.85□□□□□ -0.51
CCDC90B-212ENST00000529312 PIP4K2BP78356 416 aa11.84□□□□□ -0.51
CCDC90B-212ENST00000529312 CHRDL2Q6WN34 429 aa11.84□□□□□ -0.51
CCDC90B-212ENST00000529312 MROH1Q8NDA8 1641 aa11.84□□□□□ -0.51
CCDC90B-212ENST00000529312 DEPDC5O75140 1603 aa11.83□□□□□ -0.52
CCDC90B-212ENST00000529312 CROCC2H7BZ55 1655 aa11.83□□□□□ -0.52
CCDC90B-212ENST00000529312 SCAF11Q99590 1463 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms