RNA–Protein interactions for RNA: ENST00000528900.5

RDX-206, Transcript of radixin, humanhuman

TSL 1 (best) BASIC

Gene RDX, Length 1,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-206ENST00000528900 DEPDC5O75140 1603 aa39.71■■■■□ 3.95
RDX-206ENST00000528900 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.7■■■■□ 3.956e-8■■■□□ 16.9
RDX-206ENST00000528900 MYT1LQ9UL68 1186 aa39.7■■■■□ 3.95
RDX-206ENST00000528900 HECW2Q9P2P5 1572 aa39.66■■■■□ 3.94
RDX-206ENST00000528900 FAM69CQ0P6D2 419 aa39.62■■■■□ 3.93
RDX-206ENST00000528900 ATP10AO60312 1499 aa39.57■■■■□ 3.92
RDX-206ENST00000528900 A2MP01023 1474 aa39.57■■■■□ 3.92
RDX-206ENST00000528900 KANK1Q14678 1352 aa39.56■■■■□ 3.92
RDX-206ENST00000528900 VWDEQ8N2E2 1590 aa39.56■■■■□ 3.92
RDX-206ENST00000528900 RICTORQ6R327 1708 aa39.54■■■■□ 3.92
RDX-206ENST00000528900 PRDM15P57071 1507 aaPredicted RBP39.53■■■■□ 3.92
RDX-206ENST00000528900 KIF3BO15066 747 aa39.51■■■■□ 3.92
RDX-206ENST00000528900 CCDC144AA2RUR9 1427 aa39.51■■■■□ 3.92
RDX-206ENST00000528900 TET3O43151 1660 aa39.5■■■■□ 3.91
RDX-206ENST00000528900 PLA2R1Q13018 1463 aa39.5■■■■□ 3.91
RDX-206ENST00000528900 MROH1Q8NDA8 1641 aa39.47■■■■□ 3.91
RDX-206ENST00000528900 ABCA6Q8N139 1617 aa39.47■■■■□ 3.91
RDX-206ENST00000528900 RNF17Q9BXT8 1623 aaKnown RBP39.46■■■■□ 3.91
RDX-206ENST00000528900 BCORL1Q5H9F3 1711 aa39.46■■■■□ 3.91
RDX-206ENST00000528900 PPRC1Q5VV67 1664 aaKnown RBP39.45■■■■□ 3.91
RDX-206ENST00000528900 RAPGEF3O95398 923 aa39.45■■■■□ 3.91
RDX-206ENST00000528900 E9PCH4 1651 aa39.44■■■■□ 3.9
RDX-206ENST00000528900 FRMPD1Q5SYB0 1578 aa39.43■■■■□ 3.9
RDX-206ENST00000528900 NBPF8Q3BBV2 869 aa39.41■■■■□ 3.9
RDX-206ENST00000528900 UHRF1BP1Q6BDS2 1440 aa39.39■■■■□ 3.9
RDX-206ENST00000528900 TSPOAP1O95153 1857 aa39.38■■■■□ 3.9
RDX-206ENST00000528900 DIP2CQ9Y2E4 1556 aa39.38■■■■□ 3.89
RDX-206ENST00000528900 KIF13AQ9H1H9 1805 aa39.37■■■■□ 3.89
RDX-206ENST00000528900 ZMYM4Q5VZL5 1548 aa39.37■■■■□ 3.89
RDX-206ENST00000528900 LMTK2Q8IWU2 1503 aa39.36■■■■□ 3.89
RDX-206ENST00000528900 PTPRTO14522 1441 aa39.34■■■■□ 3.89
RDX-206ENST00000528900 TRPM2O94759 1503 aa39.33■■■■□ 3.89
RDX-206ENST00000528900 EIF4G2P78344 907 aaKnown RBP eCLIP39.33■■■■□ 3.891e-35■■■■■ 36.1
RDX-206ENST00000528900 SPHKAPQ2M3C7 1700 aa39.32■■■■□ 3.89
RDX-206ENST00000528900 EFCAB6Q5THR3 1501 aa39.27■■■■□ 3.88
RDX-206ENST00000528900 HSPA5P11021 654 aaKnown RBP39.25■■■■□ 3.87
RDX-206ENST00000528900 HIRIP3Q9BW71 556 aaPredicted RBP39.24■■■■□ 3.87
RDX-206ENST00000528900 MIER1Q8N108 512 aa39.23■■■■□ 3.87
RDX-206ENST00000528900 RALGAPBQ86X10 1494 aa39.22■■■■□ 3.87
RDX-206ENST00000528900 DCAF11Q8TEB1 546 aa39.21■■■■□ 3.87
RDX-206ENST00000528900 CEP152O94986 1710 aa39.21■■■■□ 3.87
RDX-206ENST00000528900 YEATS2Q9ULM3 1422 aa39.21■■■■□ 3.87
RDX-206ENST00000528900 ZNF326Q5BKZ1 582 aaKnown RBP39.15■■■■□ 3.86
RDX-206ENST00000528900 SPATA31E1Q6ZUB1 1445 aa39.15■■■■□ 3.86
RDX-206ENST00000528900 CLTCL1P53675 1640 aa39.14■■■■□ 3.86
RDX-206ENST00000528900 GGT6Q6P531 493 aa39.14■■■■□ 3.86
RDX-206ENST00000528900 NEURL4Q96JN8 1562 aa39.13■■■■□ 3.85
RDX-206ENST00000528900 KDM2AQ9Y2K7 1162 aa39.13■■■■□ 3.85
RDX-206ENST00000528900 ABCC3O15438 1527 aa39.12■■■■□ 3.85
RDX-206ENST00000528900 REREQ9P2R6 1566 aa39.11■■■■□ 3.85
RDX-206ENST00000528900 RGL3Q3MIN7 710 aa39.11■■■■□ 3.85
RDX-206ENST00000528900 PRAG1Q86YV5 1406 aa39.11■■■■□ 3.85
RDX-206ENST00000528900 DDX10Q13206 875 aaKnown RBP39.1■■■■□ 3.85
RDX-206ENST00000528900 ZC3H13Q5T200 1668 aaKnown RBP39.08■■■■□ 3.85
RDX-206ENST00000528900 STAC3Q96MF2 364 aa39.07■■■■□ 3.84
RDX-206ENST00000528900 WASHC2CQ9Y4E1 1318 aa39.07■■■■□ 3.84
RDX-206ENST00000528900 CAMSAP1Q5T5Y3 1602 aa39.03■■■■□ 3.84
RDX-206ENST00000528900 TRPM1Q7Z4N2 1603 aa39.03■■■■□ 3.84
RDX-206ENST00000528900 NPATQ14207 1427 aa39.02■■■■□ 3.84
RDX-206ENST00000528900 USP47Q96K76 1375 aa39.01■■■■□ 3.84
RDX-206ENST00000528900 AGLP35573 1532 aa39■■■■□ 3.83
RDX-206ENST00000528900 CNTLNQ9NXG0 1405 aa38.97■■■■□ 3.83
RDX-206ENST00000528900 KIF1BO60333 1816 aa38.97■■■■□ 3.83
RDX-206ENST00000528900 POLR1AO95602 1720 aaPredicted RBP38.97■■■■□ 3.83
RDX-206ENST00000528900 CARD11Q9BXL7 1154 aa38.97■■■■□ 3.83
RDX-206ENST00000528900 ARHGAP31Q2M1Z3 1444 aa38.97■■■■□ 3.83
RDX-206ENST00000528900 COL17A1Q9UMD9 1497 aaPredicted RBP38.96■■■■□ 3.83
RDX-206ENST00000528900 WASHC2AQ641Q2 1341 aa38.95■■■■□ 3.83
RDX-206ENST00000528900 ROCK2O75116 1388 aaKnown RBP38.94■■■■□ 3.82
RDX-206ENST00000528900 LAMC1P11047 1609 aa38.94■■■■□ 3.82
RDX-206ENST00000528900 GPRASP1Q5JY77 1395 aa38.92■■■■□ 3.82
RDX-206ENST00000528900 ARHGEF40Q8TER5 1519 aa38.92■■■■□ 3.82
RDX-206ENST00000528900 CCDC7Q96M83 1385 aa38.9■■■■□ 3.82
RDX-206ENST00000528900 PPP6R1Q9UPN7 881 aa38.89■■■■□ 3.82
RDX-206ENST00000528900 UGGT1Q9NYU2 1555 aa38.89■■■■□ 3.82
RDX-206ENST00000528900 NOS1P29475 1434 aa38.87■■■■□ 3.81
RDX-206ENST00000528900 MADDQ8WXG6 1647 aa38.86■■■■□ 3.81
RDX-206ENST00000528900 ARID4BQ4LE39 1312 aaPredicted RBP38.82■■■■□ 3.8
RDX-206ENST00000528900 ADGRB3O60242 1522 aa38.81■■■■□ 3.8
RDX-206ENST00000528900 CFAP65Q6ZU64 1925 aaKnown RBP38.81■■■■□ 3.8
RDX-206ENST00000528900 C11orf95C9JLR9 678 aaPredicted RBP38.81■■■■□ 3.8
RDX-206ENST00000528900 SIGLEC1Q9BZZ2 1709 aa38.81■■■■□ 3.8
RDX-206ENST00000528900 MYOM2P54296 1465 aa38.79■■■■□ 3.8
RDX-206ENST00000528900 IFT172Q9UG01 1749 aa38.77■■■■□ 3.8
RDX-206ENST00000528900 PIK3C2BO00750 1634 aa38.77■■■■□ 3.8
RDX-206ENST00000528900 MROH2AA6NES4 1674 aa38.77■■■■□ 3.8
RDX-206ENST00000528900 KIF7Q2M1P5 1343 aa38.76■■■■□ 3.8
RDX-206ENST00000528900 NBPF1Q3BBV0 1214 aa38.75■■■■□ 3.79
RDX-206ENST00000528900 KIAA1210Q9ULL0 1709 aa38.74■■■■□ 3.79
RDX-206ENST00000528900 SYNMO15061 1565 aa38.74■■■■□ 3.79
RDX-206ENST00000528900 ANP32CO43423 234 aa38.73■■■■□ 3.79
RDX-206ENST00000528900 PREX1Q8TCU6 1659 aa38.7■■■■□ 3.79
RDX-206ENST00000528900 ST20-MTHFSA0A0A6YYL1 179 aa38.69■■■■□ 3.78
RDX-206ENST00000528900 RPGRIP1LQ68CZ1 1315 aa38.68■■■■□ 3.78
RDX-206ENST00000528900 SLC52A1Q9NWF4 448 aa38.66■■■■□ 3.78
RDX-206ENST00000528900 NRXN1Q9ULB1 1477 aa38.64■■■■□ 3.78
RDX-206ENST00000528900 PPLO60437 1756 aa38.62■■■■□ 3.77
RDX-206ENST00000528900 CLTCQ00610 1675 aaKnown RBP38.61■■■■□ 3.77
RDX-206ENST00000528900 CHGAP10645 457 aaKnown RBP38.61■■■■□ 3.77
RDX-206ENST00000528900 CENPBP07199 599 aaPredicted RBP38.6■■■■□ 3.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms