RNA–Protein interactions for RNA: ENST00000528556.5

RDX-205, Transcript of radixin, humanhuman

TSL 3

Gene RDX, Length 803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-205ENST00000528556 ROCK1Q13464 1354 aa12.49□□□□□ -0.41
RDX-205ENST00000528556 KIF15Q9NS87 1388 aa12.48□□□□□ -0.41
RDX-205ENST00000528556 TRIM52Q96A61 297 aa12.48□□□□□ -0.41
RDX-205ENST00000528556 MAST1Q9Y2H9 1570 aa12.47□□□□□ -0.41
RDX-205ENST00000528556 ATP7AQ04656 1500 aa12.47□□□□□ -0.41
RDX-205ENST00000528556 HFM1A2PYH4 1435 aa12.46□□□□□ -0.41
RDX-205ENST00000528556 RTEL1-TNFRSF6BF6WH68 1400 aa12.46□□□□□ -0.41
RDX-205ENST00000528556 NCOA1Q15788 1441 aa12.46□□□□□ -0.41
RDX-205ENST00000528556 KDM6BO15054 1643 aa12.46□□□□□ -0.41
RDX-205ENST00000528556 ADGRL2O95490 1459 aa12.46□□□□□ -0.42
RDX-205ENST00000528556 HECW2Q9P2P5 1572 aa12.45□□□□□ -0.42
RDX-205ENST00000528556 NAIPQ13075 1403 aa12.45□□□□□ -0.42
RDX-205ENST00000528556 RAB3GAP2Q9H2M9 1393 aa12.44□□□□□ -0.42
RDX-205ENST00000528556 ACIN1Q9UKV3 1341 aaKnown RBP12.44□□□□□ -0.42
RDX-205ENST00000528556 ZFYVE16Q7Z3T8 1539 aa12.44□□□□□ -0.42
RDX-205ENST00000528556 AKT1S1Q96B36 256 aa12.44□□□□□ -0.42
RDX-205ENST00000528556 RICTORQ6R327 1708 aa12.43□□□□□ -0.42
RDX-205ENST00000528556 GCC2Q8IWJ2 1684 aa12.43□□□□□ -0.42
RDX-205ENST00000528556 MLH3Q9UHC1 1453 aa12.43□□□□□ -0.42
RDX-205ENST00000528556 CCER1Q8TC90 406 aaPredicted RBP12.43□□□□□ -0.42
RDX-205ENST00000528556 ANKRD50Q9ULJ7 1429 aa12.43□□□□□ -0.42
RDX-205ENST00000528556 PLXNC1O60486 1568 aa12.43□□□□□ -0.42
RDX-205ENST00000528556 KDM5CP41229 1560 aa12.43□□□□□ -0.42
RDX-205ENST00000528556 INO80Q9ULG1 1556 aaPredicted RBP12.43□□□□□ -0.42
RDX-205ENST00000528556 DUOX2Q9NRD8 1548 aa12.42□□□□□ -0.42
RDX-205ENST00000528556 MAGI2Q86UL8 1455 aa12.41□□□□□ -0.42
RDX-205ENST00000528556 REM2Q8IYK8 340 aaPredicted RBP12.41□□□□□ -0.42
RDX-205ENST00000528556 ARID4BQ4LE39 1312 aaPredicted RBP12.4□□□□□ -0.42
RDX-205ENST00000528556 KIF3BO15066 747 aa12.4□□□□□ -0.42
RDX-205ENST00000528556 A2MP01023 1474 aa12.4□□□□□ -0.43
RDX-205ENST00000528556 COL17A1Q9UMD9 1497 aaPredicted RBP12.4□□□□□ -0.43
RDX-205ENST00000528556 FRMPD1Q5SYB0 1578 aa12.39□□□□□ -0.43
RDX-205ENST00000528556 KIDINS220Q9ULH0 1771 aa12.39□□□□□ -0.43
RDX-205ENST00000528556 ZMYM4Q5VZL5 1548 aa12.39□□□□□ -0.43
RDX-205ENST00000528556 HRCP23327 699 aa12.39□□□□□ -0.43
RDX-205ENST00000528556 DHX29Q7Z478 1369 aaKnown RBP12.39□□□□□ -0.43
RDX-205ENST00000528556 ERBINQ96RT1 1412 aa12.38□□□□□ -0.43
RDX-205ENST00000528556 PIP4P2Q8N4L2 257 aa12.38□□□□□ -0.43
RDX-205ENST00000528556 YEATS2Q9ULM3 1422 aa12.37□□□□□ -0.43
RDX-205ENST00000528556 GGT6Q6P531 493 aa12.37□□□□□ -0.43
RDX-205ENST00000528556 KANK1Q14678 1352 aa12.37□□□□□ -0.43
RDX-205ENST00000528556 ATP10AO60312 1499 aa12.37□□□□□ -0.43
RDX-205ENST00000528556 ABCA6Q8N139 1617 aa12.37□□□□□ -0.43
RDX-205ENST00000528556 DIP2CQ9Y2E4 1556 aa12.36□□□□□ -0.43
RDX-205ENST00000528556 NUP155O75694 1391 aa12.36□□□□□ -0.43
RDX-205ENST00000528556 ESF1Q9H501 851 aaKnown RBP12.36□□□□□ -0.43
RDX-205ENST00000528556 ZBTB12Q9Y330 459 aaPredicted RBP12.36□□□□□ -0.43
RDX-205ENST00000528556 MLECQ14165 292 aa12.34□□□□□ -0.43
RDX-205ENST00000528556 SP7Q8TDD2 431 aaPredicted RBP12.34□□□□□ -0.43
RDX-205ENST00000528556 ARHGEF40Q8TER5 1519 aa12.33□□□□□ -0.44
RDX-205ENST00000528556 PITPNM1O00562 1244 aa12.32□□□□□ -0.44
RDX-205ENST00000528556 EIF2AK4Q9P2K8 1649 aaKnown RBP12.32□□□□□ -0.44
RDX-205ENST00000528556 MPHOSPH9Q99550 1183 aa12.31□□□□□ -0.44
RDX-205ENST00000528556 WASHC2CQ9Y4E1 1318 aa12.31□□□□□ -0.44
RDX-205ENST00000528556 DHX57Q6P158 1386 aaKnown RBP12.29□□□□□ -0.44
RDX-205ENST00000528556 PKD2Q13563 968 aa12.28□□□□□ -0.44
RDX-205ENST00000528556 UNC13BO14795 1591 aa12.27□□□□□ -0.44
RDX-205ENST00000528556 REREQ9P2R6 1566 aa12.27□□□□□ -0.44
RDX-205ENST00000528556 AGLP35573 1532 aa12.26□□□□□ -0.45
RDX-205ENST00000528556 MKRN4PQ13434 485 aaPredicted RBP12.25□□□□□ -0.45
RDX-205ENST00000528556 FKBP8Q14318 412 aa12.25□□□□□ -0.45
RDX-205ENST00000528556 FAM135AQ9P2D6 1515 aa12.25□□□□□ -0.45
RDX-205ENST00000528556 NEUROD1Q13562 356 aa12.24□□□□□ -0.45
RDX-205ENST00000528556 KDM5DQ9BY66 1539 aa12.24□□□□□ -0.45
RDX-205ENST00000528556 DEPDC5O75140 1603 aa12.23□□□□□ -0.45
RDX-205ENST00000528556 IQGAP3Q86VI3 1631 aa12.23□□□□□ -0.45
RDX-205ENST00000528556 RNF17Q9BXT8 1623 aaKnown RBP12.23□□□□□ -0.45
RDX-205ENST00000528556 PRDM15P57071 1507 aaPredicted RBP12.23□□□□□ -0.45
RDX-205ENST00000528556 PZPP20742 1482 aa12.23□□□□□ -0.45
RDX-205ENST00000528556 CLSPNQ9HAW4 1339 aa12.22□□□□□ -0.45
RDX-205ENST00000528556 FXR2P51116 673 aaKnown RBP eCLIP12.22□□□□□ -0.455e-11■□□□□ 8.3
RDX-205ENST00000528556 BCORL1Q5H9F3 1711 aa12.22□□□□□ -0.45
RDX-205ENST00000528556 ZEB1P37275 1124 aaPredicted RBP12.21□□□□□ -0.45
RDX-205ENST00000528556 CEP152O94986 1710 aa12.2□□□□□ -0.46
RDX-205ENST00000528556 ZC3H13Q5T200 1668 aaKnown RBP12.19□□□□□ -0.46
RDX-205ENST00000528556 TET3O43151 1660 aa12.19□□□□□ -0.46
RDX-205ENST00000528556 MROH1Q8NDA8 1641 aa12.19□□□□□ -0.46
RDX-205ENST00000528556 ABCC3O15438 1527 aa12.18□□□□□ -0.46
RDX-205ENST00000528556 EVX2Q03828 476 aa12.18□□□□□ -0.46
RDX-205ENST00000528556 SIGLEC1Q9BZZ2 1709 aa12.17□□□□□ -0.46
RDX-205ENST00000528556 CLTCQ00610 1675 aaKnown RBP12.17□□□□□ -0.46
RDX-205ENST00000528556 SIN3AQ96ST3 1273 aa12.17□□□□□ -0.46
RDX-205ENST00000528556 CAMSAP1Q5T5Y3 1602 aa12.17□□□□□ -0.46
RDX-205ENST00000528556 CNTLNQ9NXG0 1405 aa12.17□□□□□ -0.46
RDX-205ENST00000528556 VWDEQ8N2E2 1590 aa12.17□□□□□ -0.46
RDX-205ENST00000528556 LMTK2Q8IWU2 1503 aa12.16□□□□□ -0.46
RDX-205ENST00000528556 CHGAP10645 457 aaKnown RBP12.16□□□□□ -0.46
RDX-205ENST00000528556 CCDC144AA2RUR9 1427 aa12.16□□□□□ -0.46
RDX-205ENST00000528556 TONSLQ96HA7 1378 aa12.16□□□□□ -0.46
RDX-205ENST00000528556 EFCAB6Q5THR3 1501 aa12.16□□□□□ -0.46
RDX-205ENST00000528556 HAX1O00165 279 aa12.15□□□□□ -0.46
RDX-205ENST00000528556 E9PCH4 1651 aa12.14□□□□□ -0.47
RDX-205ENST00000528556 STAG3Q9UJ98 1225 aa12.14□□□□□ -0.47
RDX-205ENST00000528556 ZMYM3Q14202 1370 aa12.14□□□□□ -0.47
RDX-205ENST00000528556 ANKRD30BQ9BXX2 1392 aa12.14□□□□□ -0.47
RDX-205ENST00000528556 RPRD2Q5VT52 1461 aaKnown RBP12.14□□□□□ -0.47
RDX-205ENST00000528556 FER1L4A9Z1Z3 1794 aa12.13□□□□□ -0.47
RDX-205ENST00000528556 NPATQ14207 1427 aa12.11□□□□□ -0.47
RDX-205ENST00000528556 ARHGAP31Q2M1Z3 1444 aa12.11□□□□□ -0.47
RDX-205ENST00000528556 FBXO31Q5XUX0 539 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms