RNA–Protein interactions for RNA: ENST00000528048.5

SDHD-205, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 1 (best) BASIC

Gene SDHD, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-205ENST00000528048 WASHC2CQ9Y4E1 1318 aa18.52■□□□□ 0.56
SDHD-205ENST00000528048 INO80Q9ULG1 1556 aaPredicted RBP18.52■□□□□ 0.56
SDHD-205ENST00000528048 ZMYM3Q14202 1370 aa18.52■□□□□ 0.55
SDHD-205ENST00000528048 TCOF1Q13428 1488 aaKnown RBP18.51■□□□□ 0.55
SDHD-205ENST00000528048 ANKRD30AQ9BXX3 1397 aa18.5■□□□□ 0.55
SDHD-205ENST00000528048 DAPK1P53355 1430 aa18.49■□□□□ 0.55
SDHD-205ENST00000528048 SIGLEC1Q9BZZ2 1709 aa18.49■□□□□ 0.55
SDHD-205ENST00000528048 RIMS1Q86UR5 1692 aaKnown RBP18.49■□□□□ 0.55
SDHD-205ENST00000528048 PTPN23Q9H3S7 1636 aa18.49■□□□□ 0.55
SDHD-205ENST00000528048 KIF15Q9NS87 1388 aa18.48■□□□□ 0.55
SDHD-205ENST00000528048 ITGAEP38570 1179 aa18.47■□□□□ 0.55
SDHD-205ENST00000528048 HSPA2P54652 639 aa18.46■□□□□ 0.55
SDHD-205ENST00000528048 PLXNC1O60486 1568 aa18.45■□□□□ 0.54
SDHD-205ENST00000528048 SHANK2Q9UPX8 1470 aa18.44■□□□□ 0.54
SDHD-205ENST00000528048 MAST1Q9Y2H9 1570 aa18.42■□□□□ 0.54
SDHD-205ENST00000528048 ADGBQ8N7X0 1667 aa18.42■□□□□ 0.54
SDHD-205ENST00000528048 UHRF1BP1Q6BDS2 1440 aa18.41■□□□□ 0.54
SDHD-205ENST00000528048 NCOA1Q15788 1441 aa18.4■□□□□ 0.54
SDHD-205ENST00000528048 FER1L4A9Z1Z3 1794 aa18.4■□□□□ 0.54
SDHD-205ENST00000528048 DUOX2Q9NRD8 1548 aa18.4■□□□□ 0.54
SDHD-205ENST00000528048 KANK1Q14678 1352 aa18.39■□□□□ 0.53
SDHD-205ENST00000528048 FBXO31Q5XUX0 539 aaPredicted RBP18.38■□□□□ 0.53
SDHD-205ENST00000528048 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.38■□□□□ 0.533e-6■■□□□ 12.8
SDHD-205ENST00000528048 NPATQ14207 1427 aa18.38■□□□□ 0.53
SDHD-205ENST00000528048 LMTK3Q96Q04 1460 aa18.38■□□□□ 0.53
SDHD-205ENST00000528048 ERBINQ96RT1 1412 aa18.37■□□□□ 0.53
SDHD-205ENST00000528048 DNMT1P26358 1616 aaKnown RBP18.35■□□□□ 0.53
SDHD-205ENST00000528048 PTPRKQ15262 1439 aa18.34■□□□□ 0.53
SDHD-205ENST00000528048 TNRQ92752 1358 aa18.32■□□□□ 0.52
SDHD-205ENST00000528048 KDM5DQ9BY66 1539 aa18.32■□□□□ 0.52
SDHD-205ENST00000528048 ADGRL2O95490 1459 aa18.32■□□□□ 0.52
SDHD-205ENST00000528048 ANKRD50Q9ULJ7 1429 aa18.32■□□□□ 0.52
SDHD-205ENST00000528048 ROCK1Q13464 1354 aa18.31■□□□□ 0.52
SDHD-205ENST00000528048 FAM135AQ9P2D6 1515 aa18.31■□□□□ 0.52
SDHD-205ENST00000528048 RRBP1Q9P2E9 1410 aaKnown RBP18.28■□□□□ 0.52
SDHD-205ENST00000528048 PZPP20742 1482 aa18.27■□□□□ 0.52
SDHD-205ENST00000528048 THEMISQ8N1K5 641 aaPredicted RBP18.27■□□□□ 0.52
SDHD-205ENST00000528048 CLTCQ00610 1675 aaKnown RBP18.27■□□□□ 0.52
SDHD-205ENST00000528048 C3P01024 1663 aa18.26■□□□□ 0.51
SDHD-205ENST00000528048 MROH2AA6NES4 1674 aa18.25■□□□□ 0.51
SDHD-205ENST00000528048 ABCC3O15438 1527 aa18.25■□□□□ 0.51
SDHD-205ENST00000528048 EIF2AK4Q9P2K8 1649 aaKnown RBP18.25■□□□□ 0.51
SDHD-205ENST00000528048 PKD2Q13563 968 aa18.24■□□□□ 0.51
SDHD-205ENST00000528048 CROCC2H7BZ55 1655 aa18.22■□□□□ 0.51
SDHD-205ENST00000528048 STAG3Q9UJ98 1225 aa18.22■□□□□ 0.51
SDHD-205ENST00000528048 RNF17Q9BXT8 1623 aaKnown RBP18.22■□□□□ 0.51
SDHD-205ENST00000528048 NCKAP5LQ9HCH0 1330 aa18.22■□□□□ 0.51
SDHD-205ENST00000528048 SETD1BQ9UPS6 1966 aaKnown RBP18.21■□□□□ 0.51
SDHD-205ENST00000528048 U3KPZ7 1027 aaPredicted RBP18.21■□□□□ 0.51
SDHD-205ENST00000528048 ARHGAP31Q2M1Z3 1444 aa18.21■□□□□ 0.51
SDHD-205ENST00000528048 PREX1Q8TCU6 1659 aa18.21■□□□□ 0.51
SDHD-205ENST00000528048 NUP155O75694 1391 aa18.2■□□□□ 0.5
SDHD-205ENST00000528048 ANKLE2Q86XL3 938 aa18.2■□□□□ 0.5
SDHD-205ENST00000528048 A2ML1A8K2U0 1454 aa18.2■□□□□ 0.5
SDHD-205ENST00000528048 KCNA4P22459 653 aa18.18■□□□□ 0.5
SDHD-205ENST00000528048 NLRP1Q9C000 1473 aa18.18■□□□□ 0.5
SDHD-205ENST00000528048 TRIM52Q96A61 297 aa18.17■□□□□ 0.5
SDHD-205ENST00000528048 ERVK-7P63135 1459 aa18.16■□□□□ 0.5
SDHD-205ENST00000528048 SLC52A1Q9NWF4 448 aa18.16■□□□□ 0.5
SDHD-205ENST00000528048 PRDM15P57071 1507 aaPredicted RBP18.16■□□□□ 0.5
SDHD-205ENST00000528048 MROH1Q8NDA8 1641 aa18.15■□□□□ 0.5
SDHD-205ENST00000528048 PTPRTO14522 1441 aa18.15■□□□□ 0.5
SDHD-205ENST00000528048 IDI1Q13907 227 aa18.14■□□□□ 0.49
SDHD-205ENST00000528048 LMTK2Q8IWU2 1503 aa18.13■□□□□ 0.49
SDHD-205ENST00000528048 EID1Q9Y6B2 187 aa18.13■□□□□ 0.49
SDHD-205ENST00000528048 CEP170BQ9Y4F5 1589 aaPredicted RBP18.13■□□□□ 0.49
SDHD-205ENST00000528048 CAMSAP1Q5T5Y3 1602 aa18.12■□□□□ 0.49
SDHD-205ENST00000528048 ZC3H13Q5T200 1668 aaKnown RBP18.12■□□□□ 0.49
SDHD-205ENST00000528048 PLA2R1Q13018 1463 aa18.12■□□□□ 0.49
SDHD-205ENST00000528048 SPATA31D1Q6ZQQ2 1576 aa18.1■□□□□ 0.49
SDHD-205ENST00000528048 NAIPQ13075 1403 aa18.1■□□□□ 0.49
SDHD-205ENST00000528048 TXNDC2Q86VQ3 553 aa18.1■□□□□ 0.49
SDHD-205ENST00000528048 CERKQ8TCT0 537 aa18.09■□□□□ 0.49
SDHD-205ENST00000528048 DEPDC5O75140 1603 aa18.09■□□□□ 0.49
SDHD-205ENST00000528048 MYO3AQ8NEV4 1616 aa18.09■□□□□ 0.49
SDHD-205ENST00000528048 VWDEQ8N2E2 1590 aa18.08■□□□□ 0.49
SDHD-205ENST00000528048 UGGT1Q9NYU2 1555 aa18.08■□□□□ 0.49
SDHD-205ENST00000528048 CHGAP10645 457 aaKnown RBP18.08■□□□□ 0.48
SDHD-205ENST00000528048 HDGFP51858 240 aaKnown RBP18.08■□□□□ 0.48
SDHD-205ENST00000528048 HFM1A2PYH4 1435 aa18.07■□□□□ 0.48
SDHD-205ENST00000528048 CAPN15O75808 1086 aa18.07■□□□□ 0.48
SDHD-205ENST00000528048 RPRD2Q5VT52 1461 aaKnown RBP18.07■□□□□ 0.48
SDHD-205ENST00000528048 ACIN1Q9UKV3 1341 aaKnown RBP18.06■□□□□ 0.48
SDHD-205ENST00000528048 NOS1P29475 1434 aa18.06■□□□□ 0.48
SDHD-205ENST00000528048 SLC4A1APQ9BWU0 796 aaKnown RBP18.05■□□□□ 0.48
SDHD-205ENST00000528048 BCANQ96GW7 911 aa18.04■□□□□ 0.48
SDHD-205ENST00000528048 EFCAB6Q5THR3 1501 aa18.03■□□□□ 0.48
SDHD-205ENST00000528048 ILDR1Q86SU0 546 aaPredicted RBP18.03■□□□□ 0.48
SDHD-205ENST00000528048 FBXO41Q8TF61 875 aa18.03■□□□□ 0.48
SDHD-205ENST00000528048 CEP152O94986 1710 aa18.03■□□□□ 0.48
SDHD-205ENST00000528048 LTKP29376 864 aa18.01■□□□□ 0.47
SDHD-205ENST00000528048 TMEM2Q9UHN6 1383 aa18.01■□□□□ 0.47
SDHD-205ENST00000528048 ZNF335Q9H4Z2 1342 aaPredicted RBP18■□□□□ 0.47
SDHD-205ENST00000528048 ZNF142P52746 1687 aaPredicted RBP18■□□□□ 0.47
SDHD-205ENST00000528048 NPHP4O75161 1426 aaPredicted RBP18■□□□□ 0.47
SDHD-205ENST00000528048 PPP1R15AO75807 674 aaPredicted RBP18■□□□□ 0.47
SDHD-205ENST00000528048 SPINK5Q9NQ38 1064 aaPredicted RBP18■□□□□ 0.47
SDHD-205ENST00000528048 UNC13BO14795 1591 aa18■□□□□ 0.47
SDHD-205ENST00000528048 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.99■□□□□ 0.47
SDHD-205ENST00000528048 STRCQ7RTU9 1775 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms