RNA–Protein interactions for RNA: ENST00000527497.1

NXF1-205, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-205ENST00000527497 SSTR3P32745 418 aaPredicted RBP9.7□□□□□ -0.86
NXF1-205ENST00000527497 WWC1Q8IX03 1113 aa9.7□□□□□ -0.86
NXF1-205ENST00000527497 ZNF428Q96B54 188 aa9.7□□□□□ -0.86
NXF1-205ENST00000527497 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.7□□□□□ -0.86
NXF1-205ENST00000527497 KCNA1Q09470 495 aa9.69□□□□□ -0.86
NXF1-205ENST00000527497 PRKAR2AP13861 404 aaKnown RBP9.68□□□□□ -0.86
NXF1-205ENST00000527497 MDM2Q00987 491 aaPredicted RBP9.68□□□□□ -0.86
NXF1-205ENST00000527497 BEGAINQ9BUH8 593 aa9.68□□□□□ -0.86
NXF1-205ENST00000527497 DDX12PQ92771 950 aa9.67□□□□□ -0.86
NXF1-205ENST00000527497 POLR3EQ9NVU0 708 aa9.67□□□□□ -0.86
NXF1-205ENST00000527497 CACNB1Q02641 598 aaPredicted RBP9.66□□□□□ -0.86
NXF1-205ENST00000527497 CALR3Q96L12 384 aaKnown RBP9.66□□□□□ -0.86
NXF1-205ENST00000527497 SNRKQ9NRH2 765 aa9.66□□□□□ -0.86
NXF1-205ENST00000527497 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.66□□□□□ -0.867e-6■■□□□ 12.8
NXF1-205ENST00000527497 TBC1D12O60347 775 aa9.65□□□□□ -0.86
NXF1-205ENST00000527497 BRD1O95696 1058 aa9.65□□□□□ -0.86
NXF1-205ENST00000527497 TMEM259Q4ZIN3 620 aa9.65□□□□□ -0.86
NXF1-205ENST00000527497 RFC5P40937 340 aa9.64□□□□□ -0.87
NXF1-205ENST00000527497 CLK2P49760 499 aaKnown RBP9.64□□□□□ -0.87
NXF1-205ENST00000527497 MICALL2Q8IY33 904 aa9.64□□□□□ -0.87
NXF1-205ENST00000527497 AMOTL2Q9Y2J4 779 aa9.64□□□□□ -0.87
NXF1-205ENST00000527497 MYSM1Q5VVJ2 828 aa9.63□□□□□ -0.87
NXF1-205ENST00000527497 USTQ9Y2C2 406 aa9.63□□□□□ -0.87
NXF1-205ENST00000527497 PRIM1P49642 420 aaKnown RBP9.62□□□□□ -0.87
NXF1-205ENST00000527497 FAM217BQ9NTX9 383 aaPredicted RBP9.62□□□□□ -0.87
NXF1-205ENST00000527497 SOCS7O14512 581 aa9.6□□□□□ -0.87
NXF1-205ENST00000527497 HMGB1P09429 215 aaKnown RBP9.6□□□□□ -0.87
NXF1-205ENST00000527497 UPF1Q92900 1129 aaKnown RBP eCLIP9.6□□□□□ -0.87
NXF1-205ENST00000527497 GLMNQ92990 594 aa9.6□□□□□ -0.87
NXF1-205ENST00000527497 PBXIP1Q96AQ6 731 aa9.6□□□□□ -0.87
NXF1-205ENST00000527497 GDPD2Q9HCC8 539 aa9.6□□□□□ -0.87
NXF1-205ENST00000527497 PRM3Q9NNZ6 103 aa9.6□□□□□ -0.87
NXF1-205ENST00000527497 C2orf72A6NCS6 295 aa9.59□□□□□ -0.87
NXF1-205ENST00000527497 KIF3CO14782 793 aa9.59□□□□□ -0.87
NXF1-205ENST00000527497 DIXDC1Q155Q3 683 aa9.59□□□□□ -0.87
NXF1-205ENST00000527497 PPP2R2DQ66LE6 453 aa9.58□□□□□ -0.88
NXF1-205ENST00000527497 PHOX2BQ99453 314 aa9.58□□□□□ -0.88
NXF1-205ENST00000527497 ZRANB1Q9UGI0 708 aa9.58□□□□□ -0.88
NXF1-205ENST00000527497 CSB-PGBD3P0DP91 1061 aa9.57□□□□□ -0.88
NXF1-205ENST00000527497 CCDC27Q2M243 656 aa9.57□□□□□ -0.88
NXF1-205ENST00000527497 MTMR14Q8NCE2 650 aa9.57□□□□□ -0.88
NXF1-205ENST00000527497 PHF12Q96QT6 1004 aa9.57□□□□□ -0.88
NXF1-205ENST00000527497 ABL2P42684 1182 aa9.55□□□□□ -0.88
NXF1-205ENST00000527497 NPDC1Q9NQX5 325 aaPredicted RBP9.55□□□□□ -0.88
NXF1-205ENST00000527497 TRPC6Q9Y210 931 aa9.55□□□□□ -0.88
NXF1-205ENST00000527497 POM121CA8CG34 1229 aa9.54□□□□□ -0.88
NXF1-205ENST00000527497 EVI5O60447 810 aa9.54□□□□□ -0.88
NXF1-205ENST00000527497 TIE1P35590 1138 aa9.54□□□□□ -0.88
NXF1-205ENST00000527497 DPY19L2Q6NUT2 758 aa9.54□□□□□ -0.88
NXF1-205ENST00000527497 TBC1D2Q9BYX2 928 aa9.54□□□□□ -0.88
NXF1-205ENST00000527497 FXR2P51116 673 aaKnown RBP eCLIP9.53□□□□□ -0.88
NXF1-205ENST00000527497 CDHR5Q9HBB8 845 aa9.53□□□□□ -0.88
NXF1-205ENST00000527497 SND1Q7KZF4 910 aaKnown RBP eCLIP9.52□□□□□ -0.89
NXF1-205ENST00000527497 OATP04181 439 aa9.51□□□□□ -0.89
NXF1-205ENST00000527497 EN1Q05925 392 aaPredicted RBP9.51□□□□□ -0.89
NXF1-205ENST00000527497 TMEM121BQ9BXQ6 578 aaPredicted RBP9.51□□□□□ -0.89
NXF1-205ENST00000527497 TTLL13PA6NNM8 815 aa9.5□□□□□ -0.89
NXF1-205ENST00000527497 TUSC1Q2TAM9 212 aa9.5□□□□□ -0.89
NXF1-205ENST00000527497 METTL3Q86U44 580 aaKnown RBP9.5□□□□□ -0.89
NXF1-205ENST00000527497 MS4A3Q96HJ5 214 aa9.5□□□□□ -0.89
NXF1-205ENST00000527497 IVNS1ABPQ9Y6Y0 642 aa9.5□□□□□ -0.89
NXF1-205ENST00000527497 HSP90B1P14625 803 aaKnown RBP9.49□□□□□ -0.89
NXF1-205ENST00000527497 FBXO31Q5XUX0 539 aaPredicted RBP9.49□□□□□ -0.89
NXF1-205ENST00000527497 EPAS1Q99814 870 aa9.49□□□□□ -0.89
NXF1-205ENST00000527497 LIMD1Q9UGP4 676 aa9.49□□□□□ -0.89
NXF1-205ENST00000527497 MYT1LQ9UL68 1186 aa9.49□□□□□ -0.89
NXF1-205ENST00000527497 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.48□□□□□ -0.89
NXF1-205ENST00000527497 MAP3K7O43318 606 aa9.48□□□□□ -0.89
NXF1-205ENST00000527497 TBC1D2BQ9UPU7 963 aa9.48□□□□□ -0.89
NXF1-205ENST00000527497 CD44P16070 742 aaKnown RBP9.47□□□□□ -0.89
NXF1-205ENST00000527497 RIC3Q7Z5B4 369 aa9.47□□□□□ -0.89
NXF1-205ENST00000527497 BOLA1Q9Y3E2 137 aa9.47□□□□□ -0.89
NXF1-205ENST00000527497 G3V3G9 751 aa9.46□□□□□ -0.9
NXF1-205ENST00000527497 PHF14O94880 888 aa9.46□□□□□ -0.9
NXF1-205ENST00000527497 RFX1P22670 979 aa9.46□□□□□ -0.9
NXF1-205ENST00000527497 SRPK2P78362 688 aaKnown RBP9.46□□□□□ -0.9
NXF1-205ENST00000527497 CFAP70Q5T0N1 1121 aa9.46□□□□□ -0.9
NXF1-205ENST00000527497 USP35Q9P2H5 1018 aa9.46□□□□□ -0.9
NXF1-205ENST00000527497 HDGFL1Q5TGJ6 251 aa9.45□□□□□ -0.9
NXF1-205ENST00000527497 PDCD7Q8N8D1 485 aaKnown RBP9.45□□□□□ -0.9
NXF1-205ENST00000527497 PUS7Q96PZ0 661 aaKnown RBP9.45□□□□□ -0.9
NXF1-205ENST00000527497 PXYLP1Q8TE99 480 aa9.44□□□□□ -0.9
NXF1-205ENST00000527497 NLRP7Q8WX94 980 aa9.44□□□□□ -0.9
NXF1-205ENST00000527497 ANO8Q9HCE9 1232 aaPredicted RBP9.44□□□□□ -0.9
NXF1-205ENST00000527497 SPTLC1O15269 473 aa9.43□□□□□ -0.9
NXF1-205ENST00000527497 WASHC4Q2M389 1173 aa9.43□□□□□ -0.9
NXF1-205ENST00000527497 VRTNQ9H8Y1 702 aa9.43□□□□□ -0.9
NXF1-205ENST00000527497 TRIM35Q9UPQ4 493 aa9.43□□□□□ -0.9
NXF1-205ENST00000527497 CDK11BP21127 795 aaKnown RBP9.42□□□□□ -0.9
NXF1-205ENST00000527497 RSPH4AQ5TD94 716 aa9.42□□□□□ -0.9
NXF1-205ENST00000527497 PPP1R12CQ9BZL4 782 aa9.42□□□□□ -0.9
NXF1-205ENST00000527497 CDK11AQ9UQ88 783 aaPredicted RBP9.42□□□□□ -0.9
NXF1-205ENST00000527497 FAM161AQ3B820 660 aa9.41□□□□□ -0.9
NXF1-205ENST00000527497 ADAMTS19Q8TE59 1207 aa9.41□□□□□ -0.9
NXF1-205ENST00000527497 SPIRE2Q8WWL2 714 aa9.41□□□□□ -0.9
NXF1-205ENST00000527497 BMP2KQ9NSY1 1161 aaPredicted RBP9.41□□□□□ -0.9
NXF1-205ENST00000527497 ADGRG1Q9Y653 693 aa9.41□□□□□ -0.9
NXF1-205ENST00000527497 NDUFB9Q9Y6M9 179 aa9.41□□□□□ -0.9
NXF1-205ENST00000527497 AP1G2O75843 785 aa9.4□□□□□ -0.9
NXF1-205ENST00000527497 ZNF710Q8N1W2 664 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms