RNA–Protein interactions for RNA: ENST00000527339.1

LTBP3-208, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-208ENST00000527339 GGT6Q6P531 493 aa26.81■■□□□ 1.88
LTBP3-208ENST00000527339 TSPY4P0CV99 314 aa26.8■■□□□ 1.88
LTBP3-208ENST00000527339 TSPY10P0CW01 314 aa26.8■■□□□ 1.88
LTBP3-208ENST00000527339 ZNF335Q9H4Z2 1342 aaPredicted RBP26.8■■□□□ 1.88
LTBP3-208ENST00000527339 CROCC2H7BZ55 1655 aa26.79■■□□□ 1.88
LTBP3-208ENST00000527339 MYO3AQ8NEV4 1616 aa26.79■■□□□ 1.88
LTBP3-208ENST00000527339 DNMT1P26358 1616 aaKnown RBP26.78■■□□□ 1.88
LTBP3-208ENST00000527339 ZNF142P52746 1687 aaPredicted RBP26.76■■□□□ 1.87
LTBP3-208ENST00000527339 IQSEC2Q5JU85 1478 aa26.76■■□□□ 1.87
LTBP3-208ENST00000527339 PPARGC1BQ86YN6 1023 aaKnown RBP26.75■■□□□ 1.87
LTBP3-208ENST00000527339 CEP170BQ9Y4F5 1589 aaPredicted RBP26.75■■□□□ 1.87
LTBP3-208ENST00000527339 SHANK2Q9UPX8 1470 aa26.74■■□□□ 1.87
LTBP3-208ENST00000527339 ABCC5O15440 1437 aa26.73■■□□□ 1.87
LTBP3-208ENST00000527339 PLA2R1Q13018 1463 aa26.72■■□□□ 1.87
LTBP3-208ENST00000527339 DAPK1P53355 1430 aa26.72■■□□□ 1.87
LTBP3-208ENST00000527339 SPATA31D1Q6ZQQ2 1576 aa26.7■■□□□ 1.86
LTBP3-208ENST00000527339 DHX29Q7Z478 1369 aaKnown RBP26.7■■□□□ 1.86
LTBP3-208ENST00000527339 SOCS7O14512 581 aa26.69■■□□□ 1.86
LTBP3-208ENST00000527339 PKD2Q13563 968 aa26.68■■□□□ 1.86
LTBP3-208ENST00000527339 FAM50AQ14320 339 aaKnown RBP26.68■■□□□ 1.86
LTBP3-208ENST00000527339 FBXO31Q5XUX0 539 aaPredicted RBP26.66■■□□□ 1.86
LTBP3-208ENST00000527339 PPP6R1Q9UPN7 881 aa26.65■■□□□ 1.86
LTBP3-208ENST00000527339 UBAP1LF5GYI3 381 aa26.63■■□□□ 1.85
LTBP3-208ENST00000527339 A2ML1A8K2U0 1454 aa26.62■■□□□ 1.85
LTBP3-208ENST00000527339 DUOX2Q9NRD8 1548 aa26.6■■□□□ 1.85
LTBP3-208ENST00000527339 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.6■■□□□ 1.85
LTBP3-208ENST00000527339 EIF2AK4Q9P2K8 1649 aaKnown RBP26.59■■□□□ 1.85
LTBP3-208ENST00000527339 KIF3BO15066 747 aa26.59■■□□□ 1.85
LTBP3-208ENST00000527339 NEURL4Q96JN8 1562 aa26.57■■□□□ 1.84
LTBP3-208ENST00000527339 ANKRD30AQ9BXX3 1397 aa26.57■■□□□ 1.84
LTBP3-208ENST00000527339 KIF15Q9NS87 1388 aa26.57■■□□□ 1.84
LTBP3-208ENST00000527339 ADGRL2O95490 1459 aa26.56■■□□□ 1.84
LTBP3-208ENST00000527339 RRBP1Q9P2E9 1410 aaKnown RBP26.56■■□□□ 1.84
LTBP3-208ENST00000527339 TNRQ92752 1358 aa26.55■■□□□ 1.84
LTBP3-208ENST00000527339 CHIC2Q9UKJ5 165 aa26.54■■□□□ 1.84
LTBP3-208ENST00000527339 RNF17Q9BXT8 1623 aaKnown RBP26.54■■□□□ 1.84
LTBP3-208ENST00000527339 PZPP20742 1482 aa26.53■■□□□ 1.84
LTBP3-208ENST00000527339 ERBINQ96RT1 1412 aa26.52■■□□□ 1.84
LTBP3-208ENST00000527339 KDM5DQ9BY66 1539 aa26.52■■□□□ 1.84
LTBP3-208ENST00000527339 RRP7BPQ9NSQ0 103 aa26.52■■□□□ 1.84
LTBP3-208ENST00000527339 FAM135AQ9P2D6 1515 aa26.51■■□□□ 1.83
LTBP3-208ENST00000527339 WASHC2CQ9Y4E1 1318 aa26.49■■□□□ 1.83
LTBP3-208ENST00000527339 POLR1AO95602 1720 aaPredicted RBP26.49■■□□□ 1.83
LTBP3-208ENST00000527339 MROH1Q8NDA8 1641 aa26.44■■□□□ 1.82
LTBP3-208ENST00000527339 ROCK1Q13464 1354 aa26.44■■□□□ 1.82
LTBP3-208ENST00000527339 ZC3H13Q5T200 1668 aaKnown RBP26.44■■□□□ 1.82
LTBP3-208ENST00000527339 HSPA1LP34931 641 aa26.43■■□□□ 1.82
LTBP3-208ENST00000527339 VWDEQ8N2E2 1590 aa26.42■■□□□ 1.82
LTBP3-208ENST00000527339 DEPDC5O75140 1603 aa26.42■■□□□ 1.82
LTBP3-208ENST00000527339 PIP4K2BP78356 416 aa26.41■■□□□ 1.82
LTBP3-208ENST00000527339 PRDM15P57071 1507 aaPredicted RBP26.4■■□□□ 1.82
LTBP3-208ENST00000527339 ITGAEP38570 1179 aa26.4■■□□□ 1.82
LTBP3-208ENST00000527339 ANKLE2Q86XL3 938 aa26.4■■□□□ 1.82
LTBP3-208ENST00000527339 CPS1P31327 1500 aa26.39■■□□□ 1.82
LTBP3-208ENST00000527339 ALKQ9UM73 1620 aa26.39■■□□□ 1.82
LTBP3-208ENST00000527339 UGGT1Q9NYU2 1555 aa26.39■■□□□ 1.82
LTBP3-208ENST00000527339 NLRP1Q9C000 1473 aa26.39■■□□□ 1.82
LTBP3-208ENST00000527339 THEMISQ8N1K5 641 aaPredicted RBP26.38■■□□□ 1.81
LTBP3-208ENST00000527339 ANKRD50Q9ULJ7 1429 aa26.38■■□□□ 1.81
LTBP3-208ENST00000527339 SCAF1Q9H7N4 1312 aaKnown RBP26.38■■□□□ 1.81
LTBP3-208ENST00000527339 ABCC3O15438 1527 aa26.37■■□□□ 1.81
LTBP3-208ENST00000527339 CEP152O94986 1710 aa26.36■■□□□ 1.81
LTBP3-208ENST00000527339 MED14O60244 1454 aa26.36■■□□□ 1.81
LTBP3-208ENST00000527339 NPHP4O75161 1426 aaPredicted RBP26.36■■□□□ 1.81
LTBP3-208ENST00000527339 STRCP1A6NGW2 1772 aa26.33■■□□□ 1.8
LTBP3-208ENST00000527339 TOM1O60784 492 aa26.32■■□□□ 1.8
LTBP3-208ENST00000527339 MED1Q15648 1581 aaPredicted RBP26.3■■□□□ 1.8
LTBP3-208ENST00000527339 KANK1Q14678 1352 aa26.3■■□□□ 1.8
LTBP3-208ENST00000527339 ERVK-7P63135 1459 aa26.3■■□□□ 1.8
LTBP3-208ENST00000527339 IQGAP1P46940 1657 aa26.28■■□□□ 1.8
LTBP3-208ENST00000527339 CFAP65Q6ZU64 1925 aaKnown RBP26.27■■□□□ 1.8
LTBP3-208ENST00000527339 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.27■■□□□ 1.89e-7■□□□□ 10.7
LTBP3-208ENST00000527339 UNC13BO14795 1591 aa26.27■■□□□ 1.8
LTBP3-208ENST00000527339 GCC2Q8IWJ2 1684 aa26.26■■□□□ 1.79
LTBP3-208ENST00000527339 LMTK2Q8IWU2 1503 aa26.25■■□□□ 1.79
LTBP3-208ENST00000527339 LRRC7Q96NW7 1537 aa26.24■■□□□ 1.79
LTBP3-208ENST00000527339 ARHGAP31Q2M1Z3 1444 aa26.22■■□□□ 1.79
LTBP3-208ENST00000527339 UBR1Q8IWV7 1749 aa26.2■■□□□ 1.79
LTBP3-208ENST00000527339 LTKP29376 864 aa26.2■■□□□ 1.78
LTBP3-208ENST00000527339 NAIPQ13075 1403 aa26.2■■□□□ 1.78
LTBP3-208ENST00000527339 HFM1A2PYH4 1435 aa26.18■■□□□ 1.78
LTBP3-208ENST00000527339 SENP3Q9H4L4 574 aaPredicted RBP26.18■■□□□ 1.78
LTBP3-208ENST00000527339 EFCAB6Q5THR3 1501 aa26.17■■□□□ 1.78
LTBP3-208ENST00000527339 TET3O43151 1660 aa26.16■■□□□ 1.78
LTBP3-208ENST00000527339 IQGAP3Q86VI3 1631 aa26.16■■□□□ 1.78
LTBP3-208ENST00000527339 ARHGAP23Q9P227 1491 aa26.14■■□□□ 1.78
LTBP3-208ENST00000527339 SCAF11Q99590 1463 aaKnown RBP26.13■■□□□ 1.77
LTBP3-208ENST00000527339 SLIT1O75093 1534 aa26.11■■□□□ 1.77
LTBP3-208ENST00000527339 SYNMO15061 1565 aa26.11■■□□□ 1.77
LTBP3-208ENST00000527339 TXNDC2Q86VQ3 553 aa26.1■■□□□ 1.77
LTBP3-208ENST00000527339 RPRD2Q5VT52 1461 aaKnown RBP26.1■■□□□ 1.77
LTBP3-208ENST00000527339 NUP155O75694 1391 aa26.09■■□□□ 1.77
LTBP3-208ENST00000527339 XIRP1Q702N8 1843 aaKnown RBP26.09■■□□□ 1.77
LTBP3-208ENST00000527339 PIK3C2BO00750 1634 aa26.06■■□□□ 1.76
LTBP3-208ENST00000527339 E9PCH4 1651 aa26.06■■□□□ 1.76
LTBP3-208ENST00000527339 NOS1P29475 1434 aa26.03■■□□□ 1.76
LTBP3-208ENST00000527339 PHF23Q9BUL5 403 aaPredicted RBP26.02■■□□□ 1.76
LTBP3-208ENST00000527339 TMEM2Q9UHN6 1383 aa26.01■■□□□ 1.75
LTBP3-208ENST00000527339 IDI1Q13907 227 aa26■■□□□ 1.75
LTBP3-208ENST00000527339 RGS17Q9UGC6 210 aaPredicted RBP26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms