RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 CLTCQ00610 1675 aaKnown RBP20.99■□□□□ 0.95
CAPN1-207ENST00000527189 PTPRKQ15262 1439 aa20.97■□□□□ 0.95
CAPN1-207ENST00000527189 FAM135AQ9P2D6 1515 aa20.97■□□□□ 0.95
CAPN1-207ENST00000527189 MAST1Q9Y2H9 1570 aa20.96■□□□□ 0.95
CAPN1-207ENST00000527189 WASHC2CQ9Y4E1 1318 aa20.93■□□□□ 0.94
CAPN1-207ENST00000527189 NCOA1Q15788 1441 aa20.91■□□□□ 0.94
CAPN1-207ENST00000527189 KDM5DQ9BY66 1539 aa20.89■□□□□ 0.94
CAPN1-207ENST00000527189 CAMSAP1Q5T5Y3 1602 aa20.86■□□□□ 0.93
CAPN1-207ENST00000527189 PKD2Q13563 968 aa20.86■□□□□ 0.93
CAPN1-207ENST00000527189 PZPP20742 1482 aa20.86■□□□□ 0.93
CAPN1-207ENST00000527189 FGD6Q6ZV73 1430 aa20.86■□□□□ 0.93
CAPN1-207ENST00000527189 PLA2R1Q13018 1463 aa20.85■□□□□ 0.93
CAPN1-207ENST00000527189 SHANK2Q9UPX8 1470 aa20.85■□□□□ 0.93
CAPN1-207ENST00000527189 ZNF142P52746 1687 aaPredicted RBP20.85■□□□□ 0.93
CAPN1-207ENST00000527189 ABCC5O15440 1437 aa20.85■□□□□ 0.93
CAPN1-207ENST00000527189 MYO3AQ8NEV4 1616 aa20.85■□□□□ 0.93
CAPN1-207ENST00000527189 PTPN23Q9H3S7 1636 aa20.85■□□□□ 0.93
CAPN1-207ENST00000527189 CEP170BQ9Y4F5 1589 aaPredicted RBP20.85■□□□□ 0.93
CAPN1-207ENST00000527189 DUOX2Q9NRD8 1548 aa20.84■□□□□ 0.93
CAPN1-207ENST00000527189 TCOF1Q13428 1488 aaKnown RBP20.84■□□□□ 0.93
CAPN1-207ENST00000527189 FBXO31Q5XUX0 539 aaPredicted RBP20.84■□□□□ 0.93
CAPN1-207ENST00000527189 EIF2AK4Q9P2K8 1649 aaKnown RBP20.84■□□□□ 0.93
CAPN1-207ENST00000527189 A2ML1A8K2U0 1454 aa20.83■□□□□ 0.93
CAPN1-207ENST00000527189 TNRQ92752 1358 aa20.83■□□□□ 0.92
CAPN1-207ENST00000527189 RNF17Q9BXT8 1623 aaKnown RBP20.82■□□□□ 0.92
CAPN1-207ENST00000527189 MED1Q15648 1581 aaPredicted RBP20.82■□□□□ 0.92
CAPN1-207ENST00000527189 NCKAP5LQ9HCH0 1330 aa20.8■□□□□ 0.92
CAPN1-207ENST00000527189 DAPK1P53355 1430 aa20.8■□□□□ 0.92
CAPN1-207ENST00000527189 KIF15Q9NS87 1388 aa20.8■□□□□ 0.92
CAPN1-207ENST00000527189 RRP7BPQ9NSQ0 103 aa20.79■□□□□ 0.92
CAPN1-207ENST00000527189 ERBINQ96RT1 1412 aa20.78■□□□□ 0.92
CAPN1-207ENST00000527189 DNMT1P26358 1616 aaKnown RBP20.78■□□□□ 0.92
CAPN1-207ENST00000527189 ZC3H13Q5T200 1668 aaKnown RBP20.77■□□□□ 0.92
CAPN1-207ENST00000527189 NLRP1Q9C000 1473 aa20.77■□□□□ 0.92
CAPN1-207ENST00000527189 ABCC3O15438 1527 aa20.77■□□□□ 0.92
CAPN1-207ENST00000527189 CROCC2H7BZ55 1655 aa20.77■□□□□ 0.91
CAPN1-207ENST00000527189 ANKRD30AQ9BXX3 1397 aa20.76■□□□□ 0.91
CAPN1-207ENST00000527189 THEMISQ8N1K5 641 aaPredicted RBP20.76■□□□□ 0.91
CAPN1-207ENST00000527189 UBAP1LF5GYI3 381 aa20.75■□□□□ 0.91
CAPN1-207ENST00000527189 MROH1Q8NDA8 1641 aa20.73■□□□□ 0.91
CAPN1-207ENST00000527189 ZNF335Q9H4Z2 1342 aaPredicted RBP20.73■□□□□ 0.91
CAPN1-207ENST00000527189 ANKLE2Q86XL3 938 aa20.71■□□□□ 0.91
CAPN1-207ENST00000527189 CHIC2Q9UKJ5 165 aa20.71■□□□□ 0.91
CAPN1-207ENST00000527189 ARHGAP31Q2M1Z3 1444 aa20.7■□□□□ 0.9
CAPN1-207ENST00000527189 PRDM15P57071 1507 aaPredicted RBP20.69■□□□□ 0.9
CAPN1-207ENST00000527189 FAM50AQ14320 339 aaKnown RBP20.69■□□□□ 0.9
CAPN1-207ENST00000527189 KANK1Q14678 1352 aa20.69■□□□□ 0.9
CAPN1-207ENST00000527189 UGGT1Q9NYU2 1555 aa20.68■□□□□ 0.9
CAPN1-207ENST00000527189 ERVK-7P63135 1459 aa20.68■□□□□ 0.9
CAPN1-207ENST00000527189 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.67■□□□□ 0.9
CAPN1-207ENST00000527189 ADGRL2O95490 1459 aa20.67■□□□□ 0.9
CAPN1-207ENST00000527189 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.66■□□□□ 0.92e-6■■■□□ 14.7
CAPN1-207ENST00000527189 DEPDC5O75140 1603 aa20.65■□□□□ 0.9
CAPN1-207ENST00000527189 CEP152O94986 1710 aa20.64■□□□□ 0.9
CAPN1-207ENST00000527189 HSPA1LP34931 641 aa20.63■□□□□ 0.89
CAPN1-207ENST00000527189 LMTK2Q8IWU2 1503 aa20.62■□□□□ 0.89
CAPN1-207ENST00000527189 MED14O60244 1454 aa20.62■□□□□ 0.89
CAPN1-207ENST00000527189 POLR1AO95602 1720 aaPredicted RBP20.61■□□□□ 0.89
CAPN1-207ENST00000527189 VWDEQ8N2E2 1590 aa20.59■□□□□ 0.89
CAPN1-207ENST00000527189 NEURL4Q96JN8 1562 aa20.59■□□□□ 0.89
CAPN1-207ENST00000527189 ANKRD50Q9ULJ7 1429 aa20.59■□□□□ 0.89
CAPN1-207ENST00000527189 NPHP4O75161 1426 aaPredicted RBP20.58■□□□□ 0.88
CAPN1-207ENST00000527189 CFAP65Q6ZU64 1925 aaKnown RBP20.58■□□□□ 0.88
CAPN1-207ENST00000527189 ROCK1Q13464 1354 aa20.56■□□□□ 0.88
CAPN1-207ENST00000527189 CPS1P31327 1500 aa20.53■□□□□ 0.88
CAPN1-207ENST00000527189 UBR1Q8IWV7 1749 aa20.53■□□□□ 0.88
CAPN1-207ENST00000527189 ALKQ9UM73 1620 aa20.53■□□□□ 0.88
CAPN1-207ENST00000527189 ARHGAP23Q9P227 1491 aa20.51■□□□□ 0.87
CAPN1-207ENST00000527189 PIP4K2BP78356 416 aa20.51■□□□□ 0.87
CAPN1-207ENST00000527189 IDI1Q13907 227 aa20.51■□□□□ 0.87
CAPN1-207ENST00000527189 TXNDC2Q86VQ3 553 aa20.51■□□□□ 0.87
CAPN1-207ENST00000527189 SLC52A1Q9NWF4 448 aa20.51■□□□□ 0.87
CAPN1-207ENST00000527189 STAG3Q9UJ98 1225 aa20.51■□□□□ 0.87
CAPN1-207ENST00000527189 EID1Q9Y6B2 187 aa20.51■□□□□ 0.87
CAPN1-207ENST00000527189 SLIT1O75093 1534 aa20.51■□□□□ 0.87
CAPN1-207ENST00000527189 SCAF1Q9H7N4 1312 aaKnown RBP20.51■□□□□ 0.87
CAPN1-207ENST00000527189 RPRD2Q5VT52 1461 aaKnown RBP20.5■□□□□ 0.87
CAPN1-207ENST00000527189 NOS1P29475 1434 aa20.5■□□□□ 0.87
CAPN1-207ENST00000527189 EFCAB6Q5THR3 1501 aa20.49■□□□□ 0.87
CAPN1-207ENST00000527189 IQGAP1P46940 1657 aa20.49■□□□□ 0.87
CAPN1-207ENST00000527189 SCAF11Q99590 1463 aaKnown RBP20.49■□□□□ 0.87
CAPN1-207ENST00000527189 LTKP29376 864 aa20.48■□□□□ 0.87
CAPN1-207ENST00000527189 KDM5AP29375 1690 aaKnown RBP20.48■□□□□ 0.87
CAPN1-207ENST00000527189 TMEM2Q9UHN6 1383 aa20.47■□□□□ 0.87
CAPN1-207ENST00000527189 PHF23Q9BUL5 403 aaPredicted RBP20.47■□□□□ 0.87
CAPN1-207ENST00000527189 PPARGC1BQ86YN6 1023 aaKnown RBP20.46■□□□□ 0.87
CAPN1-207ENST00000527189 PIK3C2BO00750 1634 aa20.45■□□□□ 0.87
CAPN1-207ENST00000527189 TOM1O60784 492 aa20.44■□□□□ 0.86
CAPN1-207ENST00000527189 SYNMO15061 1565 aa20.43■□□□□ 0.86
CAPN1-207ENST00000527189 UNC13BO14795 1591 aa20.42■□□□□ 0.86
CAPN1-207ENST00000527189 TET3O43151 1660 aa20.42■□□□□ 0.86
CAPN1-207ENST00000527189 ITGAEP38570 1179 aa20.42■□□□□ 0.86
CAPN1-207ENST00000527189 RRBP1Q9P2E9 1410 aaKnown RBP20.39■□□□□ 0.85
CAPN1-207ENST00000527189 HDGFP51858 240 aaKnown RBP20.39■□□□□ 0.85
CAPN1-207ENST00000527189 ADGRB3O60242 1522 aa20.37■□□□□ 0.85
CAPN1-207ENST00000527189 NUP155O75694 1391 aa20.37■□□□□ 0.85
CAPN1-207ENST00000527189 GCC2Q8IWJ2 1684 aa20.37■□□□□ 0.85
CAPN1-207ENST00000527189 LRRC7Q96NW7 1537 aa20.36■□□□□ 0.85
CAPN1-207ENST00000527189 IQGAP3Q86VI3 1631 aa20.35■□□□□ 0.85
CAPN1-207ENST00000527189 RGS17Q9UGC6 210 aaPredicted RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms