RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 ZNF335Q9H4Z2 1342 aaPredicted RBP29.99■■■□□ 2.39
CAPN1-206ENST00000526966 PZPP20742 1482 aa29.99■■■□□ 2.39
CAPN1-206ENST00000526966 POLR1AO95602 1720 aaPredicted RBP29.97■■■□□ 2.39
CAPN1-206ENST00000526966 KIF3BO15066 747 aa29.97■■■□□ 2.39
CAPN1-206ENST00000526966 VPS8Q8N3P4 1428 aa29.95■■■□□ 2.38
CAPN1-206ENST00000526966 LRRC9Q6ZRR7 1453 aa29.94■■■□□ 2.38
CAPN1-206ENST00000526966 DISP3Q9P2K9 1392 aa29.94■■■□□ 2.38
CAPN1-206ENST00000526966 TNRQ92752 1358 aa29.93■■■□□ 2.38
CAPN1-206ENST00000526966 SPATA31D1Q6ZQQ2 1576 aa29.91■■■□□ 2.38
CAPN1-206ENST00000526966 NEURL4Q96JN8 1562 aa29.91■■■□□ 2.38
CAPN1-206ENST00000526966 MAST1Q9Y2H9 1570 aa29.91■■■□□ 2.38
CAPN1-206ENST00000526966 RNF17Q9BXT8 1623 aaKnown RBP29.9■■■□□ 2.38
CAPN1-206ENST00000526966 FBXO31Q5XUX0 539 aaPredicted RBP29.9■■■□□ 2.38
CAPN1-206ENST00000526966 WASHC2CQ9Y4E1 1318 aa29.87■■■□□ 2.37
CAPN1-206ENST00000526966 MAP3K1Q13233 1512 aa29.86■■■□□ 2.37
CAPN1-206ENST00000526966 ZC3H13Q5T200 1668 aaKnown RBP29.85■■■□□ 2.37
CAPN1-206ENST00000526966 TSPY4P0CV99 314 aa29.85■■■□□ 2.37
CAPN1-206ENST00000526966 TSPY10P0CW01 314 aa29.85■■■□□ 2.37
CAPN1-206ENST00000526966 NLRP1Q9C000 1473 aa29.84■■■□□ 2.37
CAPN1-206ENST00000526966 EIF2AK4Q9P2K8 1649 aaKnown RBP29.84■■■□□ 2.37
CAPN1-206ENST00000526966 ILDR2Q71H61 639 aa29.83■■■□□ 2.37
CAPN1-206ENST00000526966 MIA2Q96PC5 1412 aa29.82■■■□□ 2.36
CAPN1-206ENST00000526966 UBAP1LF5GYI3 381 aa29.8■■■□□ 2.36
CAPN1-206ENST00000526966 ABCC3O15438 1527 aa29.8■■■□□ 2.36
CAPN1-206ENST00000526966 UGGT1Q9NYU2 1555 aa29.79■■■□□ 2.36
CAPN1-206ENST00000526966 DEPDC5O75140 1603 aa29.78■■■□□ 2.36
CAPN1-206ENST00000526966 MROH1Q8NDA8 1641 aa29.78■■■□□ 2.36
CAPN1-206ENST00000526966 CPS1P31327 1500 aa29.78■■■□□ 2.36
CAPN1-206ENST00000526966 MYOM3Q5VTT5 1437 aa29.78■■■□□ 2.36
CAPN1-206ENST00000526966 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.76■■■□□ 2.35
CAPN1-206ENST00000526966 LOC105371045A0A1W2PR82 267 aa29.75■■■□□ 2.35
CAPN1-206ENST00000526966 KANK4Q5T7N3 995 aaPredicted RBP29.75■■■□□ 2.35
CAPN1-206ENST00000526966 MED14O60244 1454 aa29.74■■■□□ 2.35
CAPN1-206ENST00000526966 SHANK2Q9UPX8 1470 aa29.74■■■□□ 2.35
CAPN1-206ENST00000526966 VWDEQ8N2E2 1590 aa29.73■■■□□ 2.35
CAPN1-206ENST00000526966 THEMISQ8N1K5 641 aaPredicted RBP29.73■■■□□ 2.35
CAPN1-206ENST00000526966 CEP152O94986 1710 aa29.72■■■□□ 2.35
CAPN1-206ENST00000526966 ANKLE2Q86XL3 938 aa29.72■■■□□ 2.35
CAPN1-206ENST00000526966 ERVK-7P63135 1459 aa29.7■■■□□ 2.35
CAPN1-206ENST00000526966 SOCS7O14512 581 aa29.69■■■□□ 2.34
CAPN1-206ENST00000526966 DUOX2Q9NRD8 1548 aa29.69■■■□□ 2.34
CAPN1-206ENST00000526966 NPHP4O75161 1426 aaPredicted RBP29.69■■■□□ 2.34
CAPN1-206ENST00000526966 CROCC2H7BZ55 1655 aa29.69■■■□□ 2.34
CAPN1-206ENST00000526966 IQGAP1P46940 1657 aa29.69■■■□□ 2.34
CAPN1-206ENST00000526966 CFAP65Q6ZU64 1925 aaKnown RBP29.65■■■□□ 2.34
CAPN1-206ENST00000526966 PRDM15P57071 1507 aaPredicted RBP29.64■■■□□ 2.34
CAPN1-206ENST00000526966 UBR1Q8IWV7 1749 aa29.63■■■□□ 2.33
CAPN1-206ENST00000526966 PTPN23Q9H3S7 1636 aa29.6■■■□□ 2.33
CAPN1-206ENST00000526966 STRCP1A6NGW2 1772 aa29.6■■■□□ 2.33
CAPN1-206ENST00000526966 ABCC5O15440 1437 aa29.58■■■□□ 2.33
CAPN1-206ENST00000526966 ERBINQ96RT1 1412 aa29.58■■■□□ 2.33
CAPN1-206ENST00000526966 KIF15Q9NS87 1388 aa29.58■■■□□ 2.33
CAPN1-206ENST00000526966 ALKQ9UM73 1620 aa29.57■■■□□ 2.32
CAPN1-206ENST00000526966 ARHGAP31Q2M1Z3 1444 aa29.57■■■□□ 2.32
CAPN1-206ENST00000526966 TOM1O60784 492 aa29.57■■■□□ 2.32
CAPN1-206ENST00000526966 SYNMO15061 1565 aa29.55■■■□□ 2.32
CAPN1-206ENST00000526966 HSPA1LP34931 641 aa29.52■■■□□ 2.32
CAPN1-206ENST00000526966 DAPK1P53355 1430 aa29.52■■■□□ 2.32
CAPN1-206ENST00000526966 SLIT1O75093 1534 aa29.51■■■□□ 2.32
CAPN1-206ENST00000526966 ARHGAP23Q9P227 1491 aa29.51■■■□□ 2.31
CAPN1-206ENST00000526966 PIP4K2BP78356 416 aa29.51■■■□□ 2.31
CAPN1-206ENST00000526966 SCAF1Q9H7N4 1312 aaKnown RBP29.5■■■□□ 2.31
CAPN1-206ENST00000526966 SCAF11Q99590 1463 aaKnown RBP29.5■■■□□ 2.31
CAPN1-206ENST00000526966 LRRC7Q96NW7 1537 aa29.5■■■□□ 2.31
CAPN1-206ENST00000526966 MED1Q15648 1581 aaPredicted RBP29.48■■■□□ 2.31
CAPN1-206ENST00000526966 FGD6Q6ZV73 1430 aa29.48■■■□□ 2.31
CAPN1-206ENST00000526966 RRP7BPQ9NSQ0 103 aa29.46■■■□□ 2.31
CAPN1-206ENST00000526966 PIK3C2BO00750 1634 aa29.45■■■□□ 2.31
CAPN1-206ENST00000526966 LMTK2Q8IWU2 1503 aa29.43■■■□□ 2.3
CAPN1-206ENST00000526966 KDM5AP29375 1690 aaKnown RBP29.43■■■□□ 2.3
CAPN1-206ENST00000526966 APLP2Q06481 763 aa29.42■■■□□ 2.3
CAPN1-206ENST00000526966 LTKP29376 864 aa29.4■■■□□ 2.3
CAPN1-206ENST00000526966 KANK1Q14678 1352 aa29.39■■■□□ 2.29
CAPN1-206ENST00000526966 XIRP1Q702N8 1843 aaKnown RBP29.38■■■□□ 2.29
CAPN1-206ENST00000526966 ANKRD30AQ9BXX3 1397 aa29.38■■■□□ 2.29
CAPN1-206ENST00000526966 TXNDC2Q86VQ3 553 aa29.36■■■□□ 2.29
CAPN1-206ENST00000526966 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.36■■■□□ 2.292e-6■■■□□ 14.7
CAPN1-206ENST00000526966 TMEM2Q9UHN6 1383 aa29.34■■■□□ 2.29
CAPN1-206ENST00000526966 ADGRL2O95490 1459 aa29.34■■■□□ 2.29
CAPN1-206ENST00000526966 EFCAB6Q5THR3 1501 aa29.33■■■□□ 2.29
CAPN1-206ENST00000526966 EID1Q9Y6B2 187 aa29.31■■■□□ 2.28
CAPN1-206ENST00000526966 CHIC2Q9UKJ5 165 aa29.3■■■□□ 2.28
CAPN1-206ENST00000526966 NOS1P29475 1434 aa29.29■■■□□ 2.28
CAPN1-206ENST00000526966 ADGRB3O60242 1522 aa29.26■■■□□ 2.27
CAPN1-206ENST00000526966 IDI1Q13907 227 aa29.26■■■□□ 2.27
CAPN1-206ENST00000526966 TET3O43151 1660 aa29.25■■■□□ 2.27
CAPN1-206ENST00000526966 STAG3Q9UJ98 1225 aa29.23■■■□□ 2.27
CAPN1-206ENST00000526966 RPRD2Q5VT52 1461 aaKnown RBP29.21■■■□□ 2.27
CAPN1-206ENST00000526966 ANKRD50Q9ULJ7 1429 aa29.18■■■□□ 2.26
CAPN1-206ENST00000526966 NWD1Q149M9 1564 aa29.17■■■□□ 2.26
CAPN1-206ENST00000526966 MYO5BQ9ULV0 1848 aa29.16■■■□□ 2.26
CAPN1-206ENST00000526966 SLC52A1Q9NWF4 448 aa29.15■■■□□ 2.26
CAPN1-206ENST00000526966 TMEM94Q12767 1356 aa29.14■■■□□ 2.26
CAPN1-206ENST00000526966 PHF23Q9BUL5 403 aaPredicted RBP29.14■■■□□ 2.26
CAPN1-206ENST00000526966 SENP3Q9H4L4 574 aaPredicted RBP29.14■■■□□ 2.26
CAPN1-206ENST00000526966 GCC2Q8IWJ2 1684 aa29.14■■■□□ 2.26
CAPN1-206ENST00000526966 KCNA6P17658 529 aa29.13■■■□□ 2.25
CAPN1-206ENST00000526966 UNC13BO14795 1591 aa29.13■■■□□ 2.25
CAPN1-206ENST00000526966 FAM135BQ49AJ0 1406 aa29.12■■■□□ 2.25
CAPN1-206ENST00000526966 NKTRP30414 1462 aaKnown RBP29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms