RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 FRMPD1Q5SYB0 1578 aa29.77■■■□□ 2.36
SMCO4-203ENST00000526869 ABCA6Q8N139 1617 aa29.74■■■□□ 2.35
SMCO4-203ENST00000526869 A2MP01023 1474 aa29.74■■■□□ 2.35
SMCO4-203ENST00000526869 BCORL1Q5H9F3 1711 aa29.72■■■□□ 2.35
SMCO4-203ENST00000526869 NEUROD1Q13562 356 aa29.72■■■□□ 2.35
SMCO4-203ENST00000526869 PKD2Q13563 968 aa29.71■■■□□ 2.35
SMCO4-203ENST00000526869 MYT1LQ9UL68 1186 aa29.71■■■□□ 2.35
SMCO4-203ENST00000526869 RPRD2Q5VT52 1461 aaKnown RBP29.7■■■□□ 2.35
SMCO4-203ENST00000526869 DIP2CQ9Y2E4 1556 aa29.69■■■□□ 2.34
SMCO4-203ENST00000526869 TONSLQ96HA7 1378 aa29.69■■■□□ 2.34
SMCO4-203ENST00000526869 PRDM15P57071 1507 aaPredicted RBP29.69■■■□□ 2.34
SMCO4-203ENST00000526869 VWDEQ8N2E2 1590 aa29.69■■■□□ 2.34
SMCO4-203ENST00000526869 RNF17Q9BXT8 1623 aaKnown RBP29.68■■■□□ 2.34
SMCO4-203ENST00000526869 RAPGEF3O95398 923 aa29.68■■■□□ 2.34
SMCO4-203ENST00000526869 FOXD1Q16676 465 aa29.65■■■□□ 2.34
SMCO4-203ENST00000526869 MROH1Q8NDA8 1641 aa29.64■■■□□ 2.34
SMCO4-203ENST00000526869 KANK1Q14678 1352 aa29.62■■■□□ 2.33
SMCO4-203ENST00000526869 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.6■■■□□ 2.33
SMCO4-203ENST00000526869 TET3O43151 1660 aa29.6■■■□□ 2.33
SMCO4-203ENST00000526869 ATP10AO60312 1499 aa29.58■■■□□ 2.33
SMCO4-203ENST00000526869 REREQ9P2R6 1566 aa29.57■■■□□ 2.32
SMCO4-203ENST00000526869 KIF3BO15066 747 aa29.57■■■□□ 2.32
SMCO4-203ENST00000526869 LMTK2Q8IWU2 1503 aa29.56■■■□□ 2.32
SMCO4-203ENST00000526869 PPP1R15AO75807 674 aaPredicted RBP29.56■■■□□ 2.32
SMCO4-203ENST00000526869 YEATS2Q9ULM3 1422 aa29.54■■■□□ 2.32
SMCO4-203ENST00000526869 E9PCH4 1651 aa29.51■■■□□ 2.31
SMCO4-203ENST00000526869 COL17A1Q9UMD9 1497 aaPredicted RBP29.48■■■□□ 2.31
SMCO4-203ENST00000526869 PLA2R1Q13018 1463 aa29.48■■■□□ 2.31
SMCO4-203ENST00000526869 ARHGEF40Q8TER5 1519 aa29.47■■■□□ 2.31
SMCO4-203ENST00000526869 EFCAB6Q5THR3 1501 aa29.46■■■□□ 2.31
SMCO4-203ENST00000526869 AGLP35573 1532 aa29.45■■■□□ 2.31
SMCO4-203ENST00000526869 ZNF316A6NFI3 1004 aaPredicted RBP29.44■■■□□ 2.3
SMCO4-203ENST00000526869 CCDC144AA2RUR9 1427 aa29.44■■■□□ 2.3
SMCO4-203ENST00000526869 PTPRTO14522 1441 aa29.44■■■□□ 2.3
SMCO4-203ENST00000526869 TRPM2O94759 1503 aa29.43■■■□□ 2.3
SMCO4-203ENST00000526869 ZC3H13Q5T200 1668 aaKnown RBP29.42■■■□□ 2.3
SMCO4-203ENST00000526869 L3MBTL2Q969R5 705 aa29.42■■■□□ 2.3
SMCO4-203ENST00000526869 CEP152O94986 1710 aa29.42■■■□□ 2.3
SMCO4-203ENST00000526869 SPHKAPQ2M3C7 1700 aa29.42■■■□□ 2.3
SMCO4-203ENST00000526869 ABCC3O15438 1527 aa29.4■■■□□ 2.3
SMCO4-203ENST00000526869 CAMSAP1Q5T5Y3 1602 aa29.33■■■□□ 2.29
SMCO4-203ENST00000526869 GGT6Q6P531 493 aa29.31■■■□□ 2.28
SMCO4-203ENST00000526869 NEURL4Q96JN8 1562 aa29.3■■■□□ 2.28
SMCO4-203ENST00000526869 ARHGAP31Q2M1Z3 1444 aa29.29■■■□□ 2.28
SMCO4-203ENST00000526869 TRHP20396 242 aaPredicted RBP29.29■■■□□ 2.28
SMCO4-203ENST00000526869 PPP6R1Q9UPN7 881 aa29.29■■■□□ 2.28
SMCO4-203ENST00000526869 UHRF1BP1Q6BDS2 1440 aa29.28■■■□□ 2.28
SMCO4-203ENST00000526869 WASHC2CQ9Y4E1 1318 aa29.27■■■□□ 2.28
SMCO4-203ENST00000526869 CLTCL1P53675 1640 aa29.27■■■□□ 2.28
SMCO4-203ENST00000526869 NPATQ14207 1427 aa29.26■■■□□ 2.27
SMCO4-203ENST00000526869 SIGLEC1Q9BZZ2 1709 aa29.23■■■□□ 2.27
SMCO4-203ENST00000526869 SPATA31E1Q6ZUB1 1445 aa29.23■■■□□ 2.27
SMCO4-203ENST00000526869 CNTLNQ9NXG0 1405 aa29.23■■■□□ 2.27
SMCO4-203ENST00000526869 NOS1P29475 1434 aa29.18■■■□□ 2.26
SMCO4-203ENST00000526869 NBPF8Q3BBV2 869 aa29.17■■■□□ 2.26
SMCO4-203ENST00000526869 RALGAPBQ86X10 1494 aa29.15■■■□□ 2.26
SMCO4-203ENST00000526869 KIF1BO60333 1816 aa29.13■■■□□ 2.25
SMCO4-203ENST00000526869 STAC3Q96MF2 364 aa29.13■■■□□ 2.25
SMCO4-203ENST00000526869 DCAF11Q8TEB1 546 aa29.11■■■□□ 2.25
SMCO4-203ENST00000526869 PIK3C2BO00750 1634 aa29.11■■■□□ 2.25
SMCO4-203ENST00000526869 PRAG1Q86YV5 1406 aa29.1■■■□□ 2.25
SMCO4-203ENST00000526869 UGGT1Q9NYU2 1555 aa29.09■■■□□ 2.25
SMCO4-203ENST00000526869 ADGRB3O60242 1522 aa29.09■■■□□ 2.25
SMCO4-203ENST00000526869 SYNMO15061 1565 aa29.09■■■□□ 2.25
SMCO4-203ENST00000526869 CLTCQ00610 1675 aaKnown RBP29.09■■■□□ 2.25
SMCO4-203ENST00000526869 PREX1Q8TCU6 1659 aa29.09■■■□□ 2.25
SMCO4-203ENST00000526869 RGL3Q3MIN7 710 aa29.05■■■□□ 2.24
SMCO4-203ENST00000526869 TRPM1Q7Z4N2 1603 aa29.05■■■□□ 2.24
SMCO4-203ENST00000526869 DIEXFQ68CQ4 756 aaKnown RBP29.04■■■□□ 2.24
SMCO4-203ENST00000526869 EIF4G2P78344 907 aaKnown RBP eCLIP29.03■■■□□ 2.24
SMCO4-203ENST00000526869 ERVK-7P63135 1459 aa29.02■■■□□ 2.24
SMCO4-203ENST00000526869 MROH2AA6NES4 1674 aa29.02■■■□□ 2.24
SMCO4-203ENST00000526869 IFT172Q9UG01 1749 aa29.01■■■□□ 2.23
SMCO4-203ENST00000526869 KDM2AQ9Y2K7 1162 aa29.01■■■□□ 2.23
SMCO4-203ENST00000526869 MYOM2P54296 1465 aa29.01■■■□□ 2.23
SMCO4-203ENST00000526869 LAMC1P11047 1609 aa29.01■■■□□ 2.23
SMCO4-203ENST00000526869 MADDQ8WXG6 1647 aa29.01■■■□□ 2.23
SMCO4-203ENST00000526869 CFAP65Q6ZU64 1925 aaKnown RBP29■■■□□ 2.23
SMCO4-203ENST00000526869 SPATA31D1Q6ZQQ2 1576 aa28.98■■■□□ 2.23
SMCO4-203ENST00000526869 ZNF326Q5BKZ1 582 aaKnown RBP28.98■■■□□ 2.23
SMCO4-203ENST00000526869 SLC52A1Q9NWF4 448 aa28.98■■■□□ 2.23
SMCO4-203ENST00000526869 HSPA5P11021 654 aaKnown RBP28.97■■■□□ 2.23
SMCO4-203ENST00000526869 GPRASP1Q5JY77 1395 aa28.96■■■□□ 2.23
SMCO4-203ENST00000526869 ARID4BQ4LE39 1312 aaPredicted RBP28.94■■■□□ 2.22
SMCO4-203ENST00000526869 MLECQ14165 292 aa28.93■■■□□ 2.22
SMCO4-203ENST00000526869 KIAA1210Q9ULL0 1709 aa28.93■■■□□ 2.22
SMCO4-203ENST00000526869 RPGRIP1LQ68CZ1 1315 aa28.93■■■□□ 2.22
SMCO4-203ENST00000526869 ESF1Q9H501 851 aaKnown RBP28.92■■■□□ 2.22
SMCO4-203ENST00000526869 NRXN1Q9ULB1 1477 aa28.91■■■□□ 2.22
SMCO4-203ENST00000526869 ROCK2O75116 1388 aaKnown RBP28.9■■■□□ 2.22
SMCO4-203ENST00000526869 USP47Q96K76 1375 aa28.9■■■□□ 2.22
SMCO4-203ENST00000526869 PPLO60437 1756 aa28.9■■■□□ 2.22
SMCO4-203ENST00000526869 ZMYM3Q14202 1370 aa28.88■■■□□ 2.21
SMCO4-203ENST00000526869 CARD11Q9BXL7 1154 aa28.87■■■□□ 2.21
SMCO4-203ENST00000526869 TMEM131LA2VDJ0 1609 aa28.87■■■□□ 2.21
SMCO4-203ENST00000526869 IDI1Q13907 227 aa28.85■■■□□ 2.21
SMCO4-203ENST00000526869 FBXO31Q5XUX0 539 aaPredicted RBP28.84■■■□□ 2.21
SMCO4-203ENST00000526869 HIRIP3Q9BW71 556 aaPredicted RBP28.84■■■□□ 2.21
SMCO4-203ENST00000526869 POLR1AO95602 1720 aaPredicted RBP28.83■■■□□ 2.21
SMCO4-203ENST00000526869 NEXMIFQ5QGS0 1516 aa28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms