RNA–Protein interactions for RNA: ENST00000524775.1

CSTF3-205, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 4

Gene CSTF3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-205ENST00000524775 ABCA6Q8N139 1617 aa17.11■□□□□ 0.33
CSTF3-205ENST00000524775 BCORL1Q5H9F3 1711 aa17.11■□□□□ 0.33
CSTF3-205ENST00000524775 VWDEQ8N2E2 1590 aa17.1■□□□□ 0.33
CSTF3-205ENST00000524775 MROH1Q8NDA8 1641 aa17.1■□□□□ 0.33
CSTF3-205ENST00000524775 DHX29Q7Z478 1369 aaKnown RBP17.09■□□□□ 0.33
CSTF3-205ENST00000524775 RPRD2Q5VT52 1461 aaKnown RBP17.08■□□□□ 0.32
CSTF3-205ENST00000524775 PKD2Q13563 968 aa17.08■□□□□ 0.32
CSTF3-205ENST00000524775 PPP1R15AO75807 674 aaPredicted RBP17.07■□□□□ 0.32
CSTF3-205ENST00000524775 RNF17Q9BXT8 1623 aaKnown RBP17.07■□□□□ 0.32
CSTF3-205ENST00000524775 DIP2CQ9Y2E4 1556 aa17.06■□□□□ 0.32
CSTF3-205ENST00000524775 ZMYM4Q5VZL5 1548 aa17.06■□□□□ 0.32
CSTF3-205ENST00000524775 RAPGEF3O95398 923 aa17.05■□□□□ 0.32
CSTF3-205ENST00000524775 A2MP01023 1474 aa17.05■□□□□ 0.32
CSTF3-205ENST00000524775 TEX14Q8IWB6 1497 aa17.05■□□□□ 0.32
CSTF3-205ENST00000524775 E9PCH4 1651 aa17.04■□□□□ 0.32
CSTF3-205ENST00000524775 PRDM15P57071 1507 aaPredicted RBP17.03■□□□□ 0.32
CSTF3-205ENST00000524775 PLA2R1Q13018 1463 aa17.03■□□□□ 0.32
CSTF3-205ENST00000524775 TET3O43151 1660 aa17.03■□□□□ 0.32
CSTF3-205ENST00000524775 TONSLQ96HA7 1378 aa17.02■□□□□ 0.31
CSTF3-205ENST00000524775 ZNF316A6NFI3 1004 aaPredicted RBP17■□□□□ 0.31
CSTF3-205ENST00000524775 ATP10AO60312 1499 aa16.99■□□□□ 0.31
CSTF3-205ENST00000524775 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.99■□□□□ 0.318e-9■■■□□ 14.6
CSTF3-205ENST00000524775 COL17A1Q9UMD9 1497 aaPredicted RBP16.99■□□□□ 0.31
CSTF3-205ENST00000524775 CEP152O94986 1710 aa16.99■□□□□ 0.31
CSTF3-205ENST00000524775 YEATS2Q9ULM3 1422 aa16.97■□□□□ 0.31
CSTF3-205ENST00000524775 LMTK2Q8IWU2 1503 aa16.96■□□□□ 0.31
CSTF3-205ENST00000524775 SPHKAPQ2M3C7 1700 aa16.96■□□□□ 0.31
CSTF3-205ENST00000524775 KIF3BO15066 747 aa16.96■□□□□ 0.31
CSTF3-205ENST00000524775 L3MBTL2Q969R5 705 aa16.96■□□□□ 0.31
CSTF3-205ENST00000524775 MYT1LQ9UL68 1186 aa16.95■□□□□ 0.3
CSTF3-205ENST00000524775 REREQ9P2R6 1566 aa16.94■□□□□ 0.3
CSTF3-205ENST00000524775 SIGLEC1Q9BZZ2 1709 aa16.93■□□□□ 0.3
CSTF3-205ENST00000524775 PTPRTO14522 1441 aa16.93■□□□□ 0.3
CSTF3-205ENST00000524775 CFAP65Q6ZU64 1925 aaKnown RBP16.92■□□□□ 0.3
CSTF3-205ENST00000524775 EFCAB6Q5THR3 1501 aa16.91■□□□□ 0.3
CSTF3-205ENST00000524775 KANK1Q14678 1352 aa16.9■□□□□ 0.3
CSTF3-205ENST00000524775 TRPM2O94759 1503 aa16.9■□□□□ 0.3
CSTF3-205ENST00000524775 ABCC3O15438 1527 aa16.88■□□□□ 0.29
CSTF3-205ENST00000524775 AGLP35573 1532 aa16.88■□□□□ 0.29
CSTF3-205ENST00000524775 NBPF8Q3BBV2 869 aa16.88■□□□□ 0.29
CSTF3-205ENST00000524775 CLTCL1P53675 1640 aa16.88■□□□□ 0.29
CSTF3-205ENST00000524775 ARHGEF40Q8TER5 1519 aa16.87■□□□□ 0.29
CSTF3-205ENST00000524775 CAMSAP1Q5T5Y3 1602 aa16.87■□□□□ 0.29
CSTF3-205ENST00000524775 ZC3H13Q5T200 1668 aaKnown RBP16.87■□□□□ 0.29
CSTF3-205ENST00000524775 UHRF1BP1Q6BDS2 1440 aa16.86■□□□□ 0.29
CSTF3-205ENST00000524775 CCDC144AA2RUR9 1427 aa16.85■□□□□ 0.29
CSTF3-205ENST00000524775 SPATA31E1Q6ZUB1 1445 aa16.84■□□□□ 0.29
CSTF3-205ENST00000524775 NEURL4Q96JN8 1562 aa16.83■□□□□ 0.28
CSTF3-205ENST00000524775 KIF1BO60333 1816 aa16.82■□□□□ 0.28
CSTF3-205ENST00000524775 NPATQ14207 1427 aa16.8■□□□□ 0.28
CSTF3-205ENST00000524775 GGT6Q6P531 493 aa16.8■□□□□ 0.28
CSTF3-205ENST00000524775 ARHGAP31Q2M1Z3 1444 aa16.79■□□□□ 0.28
CSTF3-205ENST00000524775 IFT172Q9UG01 1749 aa16.79■□□□□ 0.28
CSTF3-205ENST00000524775 MROH2AA6NES4 1674 aa16.78■□□□□ 0.28
CSTF3-205ENST00000524775 PIK3C2BO00750 1634 aa16.78■□□□□ 0.28
CSTF3-205ENST00000524775 TRPM1Q7Z4N2 1603 aa16.78■□□□□ 0.28
CSTF3-205ENST00000524775 UGGT1Q9NYU2 1555 aa16.77■□□□□ 0.28
CSTF3-205ENST00000524775 DIEXFQ68CQ4 756 aaKnown RBP16.77■□□□□ 0.28
CSTF3-205ENST00000524775 NOS1P29475 1434 aa16.77■□□□□ 0.27
CSTF3-205ENST00000524775 RALGAPBQ86X10 1494 aa16.76■□□□□ 0.27
CSTF3-205ENST00000524775 SYNMO15061 1565 aa16.76■□□□□ 0.27
CSTF3-205ENST00000524775 PREX1Q8TCU6 1659 aa16.75■□□□□ 0.27
CSTF3-205ENST00000524775 WASHC2CQ9Y4E1 1318 aa16.75■□□□□ 0.27
CSTF3-205ENST00000524775 CLTCQ00610 1675 aaKnown RBP16.75■□□□□ 0.27
CSTF3-205ENST00000524775 PRAG1Q86YV5 1406 aa16.74■□□□□ 0.27
CSTF3-205ENST00000524775 CNTLNQ9NXG0 1405 aa16.73■□□□□ 0.27
CSTF3-205ENST00000524775 DCAF11Q8TEB1 546 aa16.73■□□□□ 0.27
CSTF3-205ENST00000524775 POLR1AO95602 1720 aaPredicted RBP16.73■□□□□ 0.27
CSTF3-205ENST00000524775 MADDQ8WXG6 1647 aa16.72■□□□□ 0.27
CSTF3-205ENST00000524775 PPP6R1Q9UPN7 881 aa16.72■□□□□ 0.27
CSTF3-205ENST00000524775 ADGRB3O60242 1522 aa16.71■□□□□ 0.27
CSTF3-205ENST00000524775 MYO5BQ9ULV0 1848 aa16.71■□□□□ 0.27
CSTF3-205ENST00000524775 HSPA5P11021 654 aaKnown RBP16.71■□□□□ 0.27
CSTF3-205ENST00000524775 PPLO60437 1756 aa16.71■□□□□ 0.27
CSTF3-205ENST00000524775 LAMC1P11047 1609 aa16.7■□□□□ 0.26
CSTF3-205ENST00000524775 TRHP20396 242 aaPredicted RBP16.7■□□□□ 0.26
CSTF3-205ENST00000524775 RGL3Q3MIN7 710 aa16.7■□□□□ 0.26
CSTF3-205ENST00000524775 HIRIP3Q9BW71 556 aaPredicted RBP16.7■□□□□ 0.26
CSTF3-205ENST00000524775 KDM2AQ9Y2K7 1162 aa16.7■□□□□ 0.26
CSTF3-205ENST00000524775 KIAA1210Q9ULL0 1709 aa16.67■□□□□ 0.26
CSTF3-205ENST00000524775 EIF4G2P78344 907 aaKnown RBP eCLIP16.67■□□□□ 0.26
CSTF3-205ENST00000524775 GPRASP1Q5JY77 1395 aa16.65■□□□□ 0.26
CSTF3-205ENST00000524775 ZNF326Q5BKZ1 582 aaKnown RBP16.64■□□□□ 0.25
CSTF3-205ENST00000524775 STAC3Q96MF2 364 aa16.64■□□□□ 0.25
CSTF3-205ENST00000524775 MYOM2P54296 1465 aa16.64■□□□□ 0.25
CSTF3-205ENST00000524775 ERVK-7P63135 1459 aa16.64■□□□□ 0.25
CSTF3-205ENST00000524775 SPATA31D1Q6ZQQ2 1576 aa16.64■□□□□ 0.25
CSTF3-205ENST00000524775 TMEM131LA2VDJ0 1609 aa16.63■□□□□ 0.25
CSTF3-205ENST00000524775 NRXN1Q9ULB1 1477 aa16.63■□□□□ 0.25
CSTF3-205ENST00000524775 IQGAP1P46940 1657 aa16.62■□□□□ 0.25
CSTF3-205ENST00000524775 C11orf95C9JLR9 678 aaPredicted RBP16.61■□□□□ 0.25
CSTF3-205ENST00000524775 NBPF1Q3BBV0 1214 aa16.61■□□□□ 0.25
CSTF3-205ENST00000524775 USP47Q96K76 1375 aa16.61■□□□□ 0.25
CSTF3-205ENST00000524775 FBXO31Q5XUX0 539 aaPredicted RBP16.6■□□□□ 0.25
CSTF3-205ENST00000524775 IDI1Q13907 227 aa16.59■□□□□ 0.25
CSTF3-205ENST00000524775 NEXMIFQ5QGS0 1516 aa16.59■□□□□ 0.25
CSTF3-205ENST00000524775 MLECQ14165 292 aa16.58■□□□□ 0.24
CSTF3-205ENST00000524775 MIER1Q8N108 512 aa16.58■□□□□ 0.24
CSTF3-205ENST00000524775 WASHC2AQ641Q2 1341 aa16.58■□□□□ 0.24
CSTF3-205ENST00000524775 ROCK2O75116 1388 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms