RNA–Protein interactions for RNA: ENST00000524630.5

CTNND1-210, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTNND1, Length 6,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-210ENST00000524630 GGT6Q6P531 493 aa12.63□□□□□ -0.39
CTNND1-210ENST00000524630 HNRNPMP52272 730 aaKnown RBP eCLIP12.62□□□□□ -0.395e-7■■■■□ 21
CTNND1-210ENST00000524630 TPM4P67936 248 aa12.62□□□□□ -0.39
CTNND1-210ENST00000524630 CSPP1Q1MSJ5 1256 aa12.62□□□□□ -0.39
CTNND1-210ENST00000524630 SMARCA4P51532 1647 aa12.62□□□□□ -0.39
CTNND1-210ENST00000524630 HDGFP51858 240 aaKnown RBP12.61□□□□□ -0.39
CTNND1-210ENST00000524630 PANK3Q9H999 370 aa12.61□□□□□ -0.39
CTNND1-210ENST00000524630 HSP90B1P14625 803 aaKnown RBP12.61□□□□□ -0.39
CTNND1-210ENST00000524630 MLECQ14165 292 aa12.6□□□□□ -0.39
CTNND1-210ENST00000524630 RRP7AQ9Y3A4 280 aaKnown RBP12.6□□□□□ -0.39
CTNND1-210ENST00000524630 SKOR2Q2VWA4 1001 aaPredicted RBP12.6□□□□□ -0.39
CTNND1-210ENST00000524630 ST18O60284 1047 aa12.6□□□□□ -0.39
CTNND1-210ENST00000524630 GOLGA6L1Q8N7Z2 621 aa12.6□□□□□ -0.39
CTNND1-210ENST00000524630 GPATCH3Q96I76 525 aa12.59□□□□□ -0.39
CTNND1-210ENST00000524630 TDRD9Q8NDG6 1382 aaKnown RBP12.59□□□□□ -0.39
CTNND1-210ENST00000524630 ST20-MTHFSA0A0A6YYL1 179 aa12.59□□□□□ -0.39
CTNND1-210ENST00000524630 HMMRO75330 724 aa12.59□□□□□ -0.39
CTNND1-210ENST00000524630 USP47Q96K76 1375 aa12.59□□□□□ -0.39
CTNND1-210ENST00000524630 SPAG9O60271 1321 aaKnown RBP12.59□□□□□ -0.39
CTNND1-210ENST00000524630 ZNF771Q7L3S4 317 aaPredicted RBP12.59□□□□□ -0.39
CTNND1-210ENST00000524630 DDX49Q9Y6V7 483 aaKnown RBP12.59□□□□□ -0.39
CTNND1-210ENST00000524630 SLC4A10Q6U841 1118 aa12.58□□□□□ -0.4
CTNND1-210ENST00000524630 STK31Q9BXU1 1019 aa12.58□□□□□ -0.4
CTNND1-210ENST00000524630 FAM13BQ9NYF5 915 aa12.57□□□□□ -0.4
CTNND1-210ENST00000524630 ANO8Q9HCE9 1232 aaPredicted RBP12.56□□□□□ -0.4
CTNND1-210ENST00000524630 E9PSI1 815 aa12.56□□□□□ -0.4
CTNND1-210ENST00000524630 BCL2L13Q9BXK5 485 aa12.56□□□□□ -0.4
CTNND1-210ENST00000524630 CCDC144AA2RUR9 1427 aa12.56□□□□□ -0.4
CTNND1-210ENST00000524630 NOC3LQ8WTT2 800 aaKnown RBP12.56□□□□□ -0.4
CTNND1-210ENST00000524630 TERF2IPQ9NYB0 399 aa12.56□□□□□ -0.4
CTNND1-210ENST00000524630 PAK3O75914 559 aaPredicted RBP12.55□□□□□ -0.4
CTNND1-210ENST00000524630 ANKRD45Q5TZF3 282 aa12.55□□□□□ -0.4
CTNND1-210ENST00000524630 NUTM2DQ5VT03 806 aaPredicted RBP12.54□□□□□ -0.4
CTNND1-210ENST00000524630 KIF16BQ96L93 1317 aa12.54□□□□□ -0.4
CTNND1-210ENST00000524630 LMOD3Q0VAK6 560 aa12.53□□□□□ -0.4
CTNND1-210ENST00000524630 NFKBIBQ15653 356 aa12.53□□□□□ -0.4
CTNND1-210ENST00000524630 COG6Q9Y2V7 657 aa12.53□□□□□ -0.4
CTNND1-210ENST00000524630 PDS5BQ9NTI5 1447 aa12.53□□□□□ -0.4
CTNND1-210ENST00000524630 CNTLNQ9NXG0 1405 aa12.53□□□□□ -0.4
CTNND1-210ENST00000524630 EFCAB2Q5VUJ9 269 aa12.53□□□□□ -0.4
CTNND1-210ENST00000524630 ZKSCAN2Q63HK3 967 aa12.52□□□□□ -0.4
CTNND1-210ENST00000524630 KIF3BO15066 747 aa12.52□□□□□ -0.41
CTNND1-210ENST00000524630 CLSTN1O94985 981 aa12.52□□□□□ -0.41
CTNND1-210ENST00000524630 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.52□□□□□ -0.412e-8■□□□□ 11.3
CTNND1-210ENST00000524630 FOXD4L6Q3SYB3 417 aaPredicted RBP12.52□□□□□ -0.41
CTNND1-210ENST00000524630 FOXD4L3Q6VB84 417 aaPredicted RBP12.52□□□□□ -0.41
CTNND1-210ENST00000524630 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.52□□□□□ -0.41
CTNND1-210ENST00000524630 FAM43AQ8N2R8 423 aa12.51□□□□□ -0.41
CTNND1-210ENST00000524630 CHMP3Q9Y3E7 222 aa12.51□□□□□ -0.41
CTNND1-210ENST00000524630 KIF21BO75037 1637 aa12.51□□□□□ -0.41
CTNND1-210ENST00000524630 RILPL2Q969X0 211 aa12.51□□□□□ -0.41
CTNND1-210ENST00000524630 IL27Q8NEV9 243 aa12.51□□□□□ -0.41
CTNND1-210ENST00000524630 CGNL1Q0VF96 1302 aa12.5□□□□□ -0.41
CTNND1-210ENST00000524630 ISY1Q9ULR0 285 aaKnown RBP12.5□□□□□ -0.41
CTNND1-210ENST00000524630 TRAK1Q9UPV9 953 aa12.5□□□□□ -0.41
CTNND1-210ENST00000524630 CUX1P39880 1505 aa12.5□□□□□ -0.41
CTNND1-210ENST00000524630 CCDC7Q96M83 1385 aa12.5□□□□□ -0.41
CTNND1-210ENST00000524630 PRDM2Q13029 1718 aa12.5□□□□□ -0.41
CTNND1-210ENST00000524630 SETQ01105 290 aaPredicted RBP12.5□□□□□ -0.41
CTNND1-210ENST00000524630 ZNF592Q92610 1267 aa12.49□□□□□ -0.41
CTNND1-210ENST00000524630 GORABQ5T7V8 394 aa12.49□□□□□ -0.41
CTNND1-210ENST00000524630 BRPF3Q9ULD4 1205 aa12.49□□□□□ -0.41
CTNND1-210ENST00000524630 CHMP5Q9NZZ3 219 aa12.49□□□□□ -0.41
CTNND1-210ENST00000524630 ZNF330Q9Y3S2 320 aaPredicted RBP12.48□□□□□ -0.41
CTNND1-210ENST00000524630 UACAQ9BZF9 1416 aa12.48□□□□□ -0.41
CTNND1-210ENST00000524630 APAF1O14727 1248 aa12.48□□□□□ -0.41
CTNND1-210ENST00000524630 RSPH4AQ5TD94 716 aa12.47□□□□□ -0.41
CTNND1-210ENST00000524630 CREBRFQ8IUR6 639 aa12.47□□□□□ -0.41
CTNND1-210ENST00000524630 PKNOX2Q96KN3 472 aa12.47□□□□□ -0.41
CTNND1-210ENST00000524630 CHMP4AQ9BY43 222 aa12.47□□□□□ -0.41
CTNND1-210ENST00000524630 H3BQV1 296 aa12.46□□□□□ -0.41
CTNND1-210ENST00000524630 KIF7Q2M1P5 1343 aa12.46□□□□□ -0.41
CTNND1-210ENST00000524630 IFFO2Q5TF58 517 aa12.46□□□□□ -0.41
CTNND1-210ENST00000524630 A0A0U1RQG5 324 aaPredicted RBP12.46□□□□□ -0.41
CTNND1-210ENST00000524630 ELL2O00472 640 aaPredicted RBP12.46□□□□□ -0.41
CTNND1-210ENST00000524630 GOLGA6L19H0YKK7 550 aa12.46□□□□□ -0.42
CTNND1-210ENST00000524630 CSB-PGBD3P0DP91 1061 aa12.46□□□□□ -0.42
CTNND1-210ENST00000524630 HDAC5Q9UQL6 1122 aa12.46□□□□□ -0.42
CTNND1-210ENST00000524630 TAF7LQ5H9L4 462 aa12.45□□□□□ -0.42
CTNND1-210ENST00000524630 CCAR2Q8N163 923 aaKnown RBP12.45□□□□□ -0.42
CTNND1-210ENST00000524630 R3HCC1Q9Y3T6 440 aaKnown RBP12.45□□□□□ -0.42
CTNND1-210ENST00000524630 DDX19BQ9UMR2 479 aa12.45□□□□□ -0.42
CTNND1-210ENST00000524630 MCTP1Q6DN14 999 aa12.45□□□□□ -0.42
CTNND1-210ENST00000524630 SF3A1Q15459 793 aaKnown RBP12.44□□□□□ -0.42
CTNND1-210ENST00000524630 CCDC34Q96HJ3 373 aa12.44□□□□□ -0.42
CTNND1-210ENST00000524630 FGD6Q6ZV73 1430 aa12.44□□□□□ -0.42
CTNND1-210ENST00000524630 ATAD2BQ9ULI0 1458 aa12.44□□□□□ -0.42
CTNND1-210ENST00000524630 LRRC9Q6ZRR7 1453 aa12.43□□□□□ -0.42
CTNND1-210ENST00000524630 AMPHP49418 695 aa12.43□□□□□ -0.42
CTNND1-210ENST00000524630 CADPSQ9ULU8 1353 aa12.43□□□□□ -0.42
CTNND1-210ENST00000524630 ATP6V1DQ9Y5K8 247 aa12.43□□□□□ -0.42
CTNND1-210ENST00000524630 WASHC2CQ9Y4E1 1318 aa12.43□□□□□ -0.42
CTNND1-210ENST00000524630 TPM3P06753 285 aa12.43□□□□□ -0.42
CTNND1-210ENST00000524630 DZIP1LQ8IYY4 767 aaKnown RBP12.43□□□□□ -0.42
CTNND1-210ENST00000524630 FAM184AQ8NB25 1140 aa12.42□□□□□ -0.42
CTNND1-210ENST00000524630 TEX35Q5T0J7 233 aa12.42□□□□□ -0.42
CTNND1-210ENST00000524630 KIF3AQ9Y496 699 aa12.42□□□□□ -0.42
CTNND1-210ENST00000524630 MRE11P49959 708 aa12.42□□□□□ -0.42
CTNND1-210ENST00000524630 LTV1Q96GA3 475 aaPredicted RBP12.42□□□□□ -0.42
CTNND1-210ENST00000524630 TPM2P07951 284 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms