RNA–Protein interactions for RNA: ENST00000524516.1

PUM1-213, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-213ENST00000524516 UGGT1Q9NYU2 1555 aa13.89□□□□□ -0.19
PUM1-213ENST00000524516 CLIP1P30622 1438 aa13.89□□□□□ -0.19
PUM1-213ENST00000524516 JCADQ9P266 1359 aa13.88□□□□□ -0.19
PUM1-213ENST00000524516 SAMD9LQ8IVG5 1584 aa13.88□□□□□ -0.19
PUM1-213ENST00000524516 PREX2Q70Z35 1606 aa13.87□□□□□ -0.19
PUM1-213ENST00000524516 PLXNC1O60486 1568 aa13.87□□□□□ -0.19
PUM1-213ENST00000524516 CDK12Q9NYV4 1490 aaPredicted RBP13.87□□□□□ -0.19
PUM1-213ENST00000524516 XIRP1Q702N8 1843 aaKnown RBP13.86□□□□□ -0.19
PUM1-213ENST00000524516 SETBP1Q9Y6X0 1596 aa13.86□□□□□ -0.19
PUM1-213ENST00000524516 PHLPP1O60346 1717 aa13.86□□□□□ -0.19
PUM1-213ENST00000524516 A2MP01023 1474 aa13.86□□□□□ -0.19
PUM1-213ENST00000524516 TROQ12816 1431 aaPredicted RBP13.85□□□□□ -0.19
PUM1-213ENST00000524516 SPAG9O60271 1321 aaKnown RBP13.85□□□□□ -0.19
PUM1-213ENST00000524516 FBXO31Q5XUX0 539 aaPredicted RBP13.84□□□□□ -0.19
PUM1-213ENST00000524516 RBM33Q96EV2 1170 aaKnown RBP13.84□□□□□ -0.19
PUM1-213ENST00000524516 ATP7AQ04656 1500 aa13.84□□□□□ -0.19
PUM1-213ENST00000524516 NLRP1Q9C000 1473 aa13.83□□□□□ -0.2
PUM1-213ENST00000524516 LRP6O75581 1613 aa13.82□□□□□ -0.2
PUM1-213ENST00000524516 NUTM2BA6NNL0 878 aaPredicted RBP13.82□□□□□ -0.2
PUM1-213ENST00000524516 NUTM2EB1AL46 878 aaPredicted RBP13.82□□□□□ -0.2
PUM1-213ENST00000524516 NUTM2DQ5VT03 806 aaPredicted RBP13.82□□□□□ -0.2
PUM1-213ENST00000524516 NUTM2AQ8IVF1 878 aaPredicted RBP13.82□□□□□ -0.2
PUM1-213ENST00000524516 LRRC9Q6ZRR7 1453 aa13.81□□□□□ -0.2
PUM1-213ENST00000524516 KDM5DQ9BY66 1539 aa13.81□□□□□ -0.2
PUM1-213ENST00000524516 ZC3H13Q5T200 1668 aaKnown RBP13.81□□□□□ -0.2
PUM1-213ENST00000524516 PZPP20742 1482 aa13.8□□□□□ -0.2
PUM1-213ENST00000524516 SPATA31A6Q5VVP1 1343 aa13.8□□□□□ -0.2
PUM1-213ENST00000524516 SYCP2Q9BX26 1530 aa13.8□□□□□ -0.2
PUM1-213ENST00000524516 INO80Q9ULG1 1556 aaPredicted RBP13.79□□□□□ -0.2
PUM1-213ENST00000524516 ZNF777Q9ULD5 760 aaPredicted RBP13.78□□□□□ -0.2
PUM1-213ENST00000524516 MIA2Q96PC5 1412 aa13.77□□□□□ -0.21
PUM1-213ENST00000524516 RGS12O14924 1447 aa13.76□□□□□ -0.21
PUM1-213ENST00000524516 TMEM94Q12767 1356 aa13.76□□□□□ -0.21
PUM1-213ENST00000524516 ADGBQ8N7X0 1667 aa13.75□□□□□ -0.21
PUM1-213ENST00000524516 COL16A1Q07092 1604 aaPredicted RBP13.75□□□□□ -0.21
PUM1-213ENST00000524516 ATAD2Q6PL18 1390 aa13.74□□□□□ -0.21
PUM1-213ENST00000524516 SCAF11Q99590 1463 aaKnown RBP13.74□□□□□ -0.21
PUM1-213ENST00000524516 FGD6Q6ZV73 1430 aa13.73□□□□□ -0.21
PUM1-213ENST00000524516 CDC42BPAQ5VT25 1732 aa13.73□□□□□ -0.21
PUM1-213ENST00000524516 HNRNPMP52272 730 aaKnown RBP eCLIP13.72□□□□□ -0.217e-7■■□□□ 13.5
PUM1-213ENST00000524516 IFFO2Q5TF58 517 aa13.72□□□□□ -0.21
PUM1-213ENST00000524516 CHIC1Q5VXU3 224 aa13.72□□□□□ -0.21
PUM1-213ENST00000524516 FMN1Q68DA7 1419 aa13.72□□□□□ -0.21
PUM1-213ENST00000524516 AFF2P51816 1311 aa13.71□□□□□ -0.21
PUM1-213ENST00000524516 MAP3K1Q13233 1512 aa13.71□□□□□ -0.21
PUM1-213ENST00000524516 WASHC2CQ9Y4E1 1318 aa13.7□□□□□ -0.22
PUM1-213ENST00000524516 MSH6P52701 1360 aa13.7□□□□□ -0.22
PUM1-213ENST00000524516 SHPRHQ149N8 1683 aa13.69□□□□□ -0.22
PUM1-213ENST00000524516 PROSER2Q86WR7 435 aaPredicted RBP13.69□□□□□ -0.22
PUM1-213ENST00000524516 RBM6P78332 1123 aaKnown RBP13.68□□□□□ -0.22
PUM1-213ENST00000524516 SLAIN2Q9P270 581 aa13.68□□□□□ -0.22
PUM1-213ENST00000524516 LRP5O75197 1615 aa13.68□□□□□ -0.22
PUM1-213ENST00000524516 TIAM1Q13009 1591 aa13.66□□□□□ -0.22
PUM1-213ENST00000524516 KIF3BO15066 747 aa13.66□□□□□ -0.22
PUM1-213ENST00000524516 TXNDC2Q86VQ3 553 aa13.66□□□□□ -0.22
PUM1-213ENST00000524516 CSRNP3Q8WYN3 585 aa13.66□□□□□ -0.22
PUM1-213ENST00000524516 QTRT2Q9H974 415 aaKnown RBP13.65□□□□□ -0.22
PUM1-213ENST00000524516 UBR1Q8IWV7 1749 aa13.64□□□□□ -0.23
PUM1-213ENST00000524516 LRRIQ1Q96JM4 1722 aa13.64□□□□□ -0.23
PUM1-213ENST00000524516 PLEKHH2Q8IVE3 1493 aa13.64□□□□□ -0.23
PUM1-213ENST00000524516 LTKP29376 864 aa13.63□□□□□ -0.23
PUM1-213ENST00000524516 EID1Q9Y6B2 187 aa13.63□□□□□ -0.23
PUM1-213ENST00000524516 PRDM15P57071 1507 aaPredicted RBP13.63□□□□□ -0.23
PUM1-213ENST00000524516 NGLY1Q96IV0 654 aa13.62□□□□□ -0.23
PUM1-213ENST00000524516 KIAA1107Q9UPP5 1409 aa13.62□□□□□ -0.23
PUM1-213ENST00000524516 DHX29Q7Z478 1369 aaKnown RBP13.61□□□□□ -0.23
PUM1-213ENST00000524516 KCNA6P17658 529 aa13.61□□□□□ -0.23
PUM1-213ENST00000524516 YY1P25490 414 aa13.61□□□□□ -0.23
PUM1-213ENST00000524516 NKTRP30414 1462 aaKnown RBP13.61□□□□□ -0.23
PUM1-213ENST00000524516 SLIT1O75093 1534 aa13.6□□□□□ -0.23
PUM1-213ENST00000524516 C8orf37Q96NL8 207 aa13.6□□□□□ -0.23
PUM1-213ENST00000524516 AHDC1Q5TGY3 1603 aaPredicted RBP13.6□□□□□ -0.23
PUM1-213ENST00000524516 NCOA2Q15596 1464 aa13.6□□□□□ -0.23
PUM1-213ENST00000524516 ABCC3O15438 1527 aa13.59□□□□□ -0.23
PUM1-213ENST00000524516 CCDC125Q86Z20 511 aa13.59□□□□□ -0.23
PUM1-213ENST00000524516 ARHGAP23Q9P227 1491 aa13.59□□□□□ -0.23
PUM1-213ENST00000524516 ERVK-7P63135 1459 aa13.58□□□□□ -0.24
PUM1-213ENST00000524516 KDM5AP29375 1690 aaKnown RBP13.58□□□□□ -0.24
PUM1-213ENST00000524516 NWD1Q149M9 1564 aa13.58□□□□□ -0.24
PUM1-213ENST00000524516 CCDC18Q5T9S5 1454 aa13.57□□□□□ -0.24
PUM1-213ENST00000524516 CFDP1Q9UEE9 299 aaPredicted RBP13.57□□□□□ -0.24
PUM1-213ENST00000524516 GPATCH8Q9UKJ3 1502 aaKnown RBP13.56□□□□□ -0.24
PUM1-213ENST00000524516 DIP2AQ14689 1571 aa13.54□□□□□ -0.24
PUM1-213ENST00000524516 C14orf37Q86TY3 774 aa13.54□□□□□ -0.24
PUM1-213ENST00000524516 SLC26A8Q96RN1 970 aa13.54□□□□□ -0.24
PUM1-213ENST00000524516 RTEL1-TNFRSF6BF6WH68 1400 aa13.54□□□□□ -0.24
PUM1-213ENST00000524516 NHSL1Q5SYE7 1610 aa13.53□□□□□ -0.24
PUM1-213ENST00000524516 EP400Q96L91 3159 aa13.52□□□□□ -0.25
PUM1-213ENST00000524516 ARHGAP35Q9NRY4 1499 aa13.51□□□□□ -0.25
PUM1-213ENST00000524516 STAG3Q9UJ98 1225 aa13.5□□□□□ -0.25
PUM1-213ENST00000524516 CCNB3Q8WWL7 1395 aa13.49□□□□□ -0.25
PUM1-213ENST00000524516 TMEM2Q9UHN6 1383 aa13.49□□□□□ -0.25
PUM1-213ENST00000524516 BCANQ96GW7 911 aa13.49□□□□□ -0.25
PUM1-213ENST00000524516 SENP3-EIF4A1A0A087X0R7 540 aa13.48□□□□□ -0.25
PUM1-213ENST00000524516 CFAP65Q6ZU64 1925 aaKnown RBP13.47□□□□□ -0.25
PUM1-213ENST00000524516 PSDA5PKW4 1024 aaPredicted RBP13.47□□□□□ -0.25
PUM1-213ENST00000524516 ATF3P18847 181 aa13.47□□□□□ -0.25
PUM1-213ENST00000524516 SF3B2Q13435 895 aaKnown RBP13.47□□□□□ -0.25
PUM1-213ENST00000524516 CADPS2Q86UW7 1296 aa13.47□□□□□ -0.25
PUM1-213ENST00000524516 BLMP54132 1417 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms