RNA–Protein interactions for RNA: ENST00000524429.2

NECTIN1-204, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 2

Gene NECTIN1, Length 777 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-204ENST00000524429 NCOA2Q15596 1464 aa12.34□□□□□ -0.43
NECTIN1-204ENST00000524429 MYO5CQ9NQX4 1742 aa12.34□□□□□ -0.43
NECTIN1-204ENST00000524429 KANK4Q5T7N3 995 aaPredicted RBP12.34□□□□□ -0.43
NECTIN1-204ENST00000524429 MIER1Q8N108 512 aa12.34□□□□□ -0.43
NECTIN1-204ENST00000524429 ATP1B4Q9UN42 357 aaPredicted RBP12.34□□□□□ -0.43
NECTIN1-204ENST00000524429 TRPC6Q9Y210 931 aa12.34□□□□□ -0.43
NECTIN1-204ENST00000524429 WDR7Q9Y4E6 1490 aa12.34□□□□□ -0.43
NECTIN1-204ENST00000524429 BMP2KQ9NSY1 1161 aaPredicted RBP12.33□□□□□ -0.44
NECTIN1-204ENST00000524429 PREX2Q70Z35 1606 aa12.33□□□□□ -0.44
NECTIN1-204ENST00000524429 ABCA9Q8IUA7 1624 aa12.33□□□□□ -0.44
NECTIN1-204ENST00000524429 POTEFA5A3E0 1075 aa12.32□□□□□ -0.44
NECTIN1-204ENST00000524429 GLI2P10070 1586 aa12.31□□□□□ -0.44
NECTIN1-204ENST00000524429 ASXL2Q76L83 1435 aa12.31□□□□□ -0.44
NECTIN1-204ENST00000524429 ARAP3Q8WWN8 1544 aa12.31□□□□□ -0.44
NECTIN1-204ENST00000524429 CDC42BPBQ9Y5S2 1711 aa12.31□□□□□ -0.44
NECTIN1-204ENST00000524429 RRBP1Q9P2E9 1410 aaKnown RBP12.3□□□□□ -0.44
NECTIN1-204ENST00000524429 PLEKHD1A6NEE1 506 aa12.3□□□□□ -0.44
NECTIN1-204ENST00000524429 TTC37Q6PGP7 1564 aa12.3□□□□□ -0.44
NECTIN1-204ENST00000524429 MYOM3Q5VTT5 1437 aa12.29□□□□□ -0.44
NECTIN1-204ENST00000524429 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.29□□□□□ -0.44
NECTIN1-204ENST00000524429 MAP3K13O43283 966 aa12.29□□□□□ -0.44
NECTIN1-204ENST00000524429 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.29□□□□□ -0.44
NECTIN1-204ENST00000524429 PHLDB1Q86UU1 1377 aa12.28□□□□□ -0.44
NECTIN1-204ENST00000524429 MIA2Q96PC5 1412 aa12.28□□□□□ -0.44
NECTIN1-204ENST00000524429 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.27□□□□□ -0.45
NECTIN1-204ENST00000524429 PTPN23Q9H3S7 1636 aa12.26□□□□□ -0.45
NECTIN1-204ENST00000524429 PLCD3Q8N3E9 789 aa12.26□□□□□ -0.45
NECTIN1-204ENST00000524429 FGD6Q6ZV73 1430 aa12.26□□□□□ -0.45
NECTIN1-204ENST00000524429 MAP3K4Q9Y6R4 1608 aa12.26□□□□□ -0.45
NECTIN1-204ENST00000524429 ARID3CA6NKF2 412 aa12.25□□□□□ -0.45
NECTIN1-204ENST00000524429 TPRNQ4KMQ1 711 aa12.25□□□□□ -0.45
NECTIN1-204ENST00000524429 TCOF1Q13428 1488 aaKnown RBP12.25□□□□□ -0.45
NECTIN1-204ENST00000524429 GPATCH8Q9UKJ3 1502 aaKnown RBP12.25□□□□□ -0.45
NECTIN1-204ENST00000524429 CFAP74Q9C0B2 1584 aa12.24□□□□□ -0.45
NECTIN1-204ENST00000524429 CCNB3Q8WWL7 1395 aa12.23□□□□□ -0.45
NECTIN1-204ENST00000524429 SEC24BO95487 1268 aa12.23□□□□□ -0.45
NECTIN1-204ENST00000524429 TIE1P35590 1138 aa12.23□□□□□ -0.45
NECTIN1-204ENST00000524429 TRIM26Q12899 539 aaPredicted RBP12.23□□□□□ -0.45
NECTIN1-204ENST00000524429 RASEFQ8IZ41 740 aa12.23□□□□□ -0.45
NECTIN1-204ENST00000524429 ZBTB47Q9UFB7 747 aaPredicted RBP12.23□□□□□ -0.45
NECTIN1-204ENST00000524429 CROCC2H7BZ55 1655 aa12.22□□□□□ -0.45
NECTIN1-204ENST00000524429 TEX14Q8IWB6 1497 aa12.22□□□□□ -0.45
NECTIN1-204ENST00000524429 PPARGC1BQ86YN6 1023 aaKnown RBP12.22□□□□□ -0.45
NECTIN1-204ENST00000524429 IFNLR1Q8IU57 520 aaPredicted RBP12.22□□□□□ -0.45
NECTIN1-204ENST00000524429 COLQQ9Y215 455 aaPredicted RBP12.22□□□□□ -0.45
NECTIN1-204ENST00000524429 DNMT1P26358 1616 aaKnown RBP12.2□□□□□ -0.46
NECTIN1-204ENST00000524429 BBXQ8WY36 941 aaPredicted RBP12.2□□□□□ -0.46
NECTIN1-204ENST00000524429 LMTK3Q96Q04 1460 aa12.2□□□□□ -0.46
NECTIN1-204ENST00000524429 PLCH2O75038 1416 aa12.2□□□□□ -0.46
NECTIN1-204ENST00000524429 ARHGEF5Q12774 1597 aa12.19□□□□□ -0.46
NECTIN1-204ENST00000524429 SAMD9LQ8IVG5 1584 aa12.19□□□□□ -0.46
NECTIN1-204ENST00000524429 TTLL13PA6NNM8 815 aa12.19□□□□□ -0.46
NECTIN1-204ENST00000524429 PKD2Q13563 968 aa12.19□□□□□ -0.46
NECTIN1-204ENST00000524429 CAMSAP2Q08AD1 1489 aa12.18□□□□□ -0.46
NECTIN1-204ENST00000524429 ARHGAP5Q13017 1502 aa12.17□□□□□ -0.46
NECTIN1-204ENST00000524429 ADGBQ8N7X0 1667 aa12.17□□□□□ -0.46
NECTIN1-204ENST00000524429 PLEKHH2Q8IVE3 1493 aa12.17□□□□□ -0.46
NECTIN1-204ENST00000524429 ABCC1P33527 1531 aa12.16□□□□□ -0.46
NECTIN1-204ENST00000524429 KIAA1107Q9UPP5 1409 aa12.14□□□□□ -0.47
NECTIN1-204ENST00000524429 SHANK2Q9UPX8 1470 aa12.14□□□□□ -0.47
NECTIN1-204ENST00000524429 CDAN1Q8IWY9 1227 aa12.13□□□□□ -0.47
NECTIN1-204ENST00000524429 SGIP1Q9BQI5 828 aa12.13□□□□□ -0.47
NECTIN1-204ENST00000524429 CFDP1Q9UEE9 299 aaPredicted RBP12.13□□□□□ -0.47
NECTIN1-204ENST00000524429 TRIM35Q9UPQ4 493 aa12.13□□□□□ -0.47
NECTIN1-204ENST00000524429 FANCAO15360 1455 aa12.13□□□□□ -0.47
NECTIN1-204ENST00000524429 NEO1Q92859 1461 aa12.13□□□□□ -0.47
NECTIN1-204ENST00000524429 MAST1Q9Y2H9 1570 aa12.13□□□□□ -0.47
NECTIN1-204ENST00000524429 GCC2Q8IWJ2 1684 aa12.13□□□□□ -0.47
NECTIN1-204ENST00000524429 CD109Q6YHK3 1445 aa12.12□□□□□ -0.47
NECTIN1-204ENST00000524429 ILDR2Q71H61 639 aa12.12□□□□□ -0.47
NECTIN1-204ENST00000524429 KCNH8Q96L42 1107 aa12.12□□□□□ -0.47
NECTIN1-204ENST00000524429 SYCP2Q9BX26 1530 aa12.11□□□□□ -0.47
NECTIN1-204ENST00000524429 PTPRMP28827 1452 aa12.11□□□□□ -0.47
NECTIN1-204ENST00000524429 MBD5Q9P267 1494 aa12.11□□□□□ -0.47
NECTIN1-204ENST00000524429 KDM2AQ9Y2K7 1162 aa12.11□□□□□ -0.47
NECTIN1-204ENST00000524429 PCDHB13Q9Y5F0 798 aa12.11□□□□□ -0.47
NECTIN1-204ENST00000524429 AKNAQ7Z591 1439 aa12.11□□□□□ -0.47
NECTIN1-204ENST00000524429 PAXIP1Q6ZW49 1069 aaPredicted RBP12.1□□□□□ -0.47
NECTIN1-204ENST00000524429 DAPK1P53355 1430 aa12.1□□□□□ -0.47
NECTIN1-204ENST00000524429 PLXNC1O60486 1568 aa12.09□□□□□ -0.47
NECTIN1-204ENST00000524429 CCDC141Q6ZP82 1450 aa12.09□□□□□ -0.47
NECTIN1-204ENST00000524429 RICTORQ6R327 1708 aa12.09□□□□□ -0.47
NECTIN1-204ENST00000524429 SOCS7O14512 581 aa12.09□□□□□ -0.47
NECTIN1-204ENST00000524429 FAM212AQ96EL1 285 aa12.09□□□□□ -0.47
NECTIN1-204ENST00000524429 ADGRL2O95490 1459 aa12.08□□□□□ -0.47
NECTIN1-204ENST00000524429 EFCAB2Q5VUJ9 269 aa12.08□□□□□ -0.48
NECTIN1-204ENST00000524429 KDM5CP41229 1560 aa12.08□□□□□ -0.48
NECTIN1-204ENST00000524429 ABCC5O15440 1437 aa12.07□□□□□ -0.48
NECTIN1-204ENST00000524429 RSPH4AQ5TD94 716 aa12.07□□□□□ -0.48
NECTIN1-204ENST00000524429 INO80Q9ULG1 1556 aaPredicted RBP12.07□□□□□ -0.48
NECTIN1-204ENST00000524429 ROCK1Q13464 1354 aa12.06□□□□□ -0.48
NECTIN1-204ENST00000524429 FAM50AQ14320 339 aaKnown RBP12.06□□□□□ -0.48
NECTIN1-204ENST00000524429 IER5LQ5T953 404 aa12.06□□□□□ -0.48
NECTIN1-204ENST00000524429 SLAIN1Q8ND83 568 aa12.06□□□□□ -0.48
NECTIN1-204ENST00000524429 CFAP44Q96MT7 982 aa12.06□□□□□ -0.48
NECTIN1-204ENST00000524429 ADAMTSL3P82987 1691 aa12.06□□□□□ -0.48
NECTIN1-204ENST00000524429 ARHGEF12Q9NZN5 1544 aa12.06□□□□□ -0.48
NECTIN1-204ENST00000524429 DISP3Q9P2K9 1392 aa12.05□□□□□ -0.48
NECTIN1-204ENST00000524429 NUBP1P53384 320 aa12.05□□□□□ -0.48
NECTIN1-204ENST00000524429 PCGF6Q9BYE7 350 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms