RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-222ENST00000524006 FANCAO15360 1455 aa15.22■□□□□ 0.03
SPIDR-222ENST00000524006 MADDQ8WXG6 1647 aa15.22■□□□□ 0.03
SPIDR-222ENST00000524006 HNRNPMP52272 730 aaKnown RBP eCLIP15.22■□□□□ 0.033e-6■■■■□ 25.9
SPIDR-222ENST00000524006 IQGAP3Q86VI3 1631 aa15.21■□□□□ 0.03
SPIDR-222ENST00000524006 PLCH2O75038 1416 aa15.21■□□□□ 0.03
SPIDR-222ENST00000524006 ANKRD30BQ9BXX2 1392 aa15.21■□□□□ 0.02
SPIDR-222ENST00000524006 RICTORQ6R327 1708 aa15.2■□□□□ 0.02
SPIDR-222ENST00000524006 NUP155O75694 1391 aa15.2■□□□□ 0.02
SPIDR-222ENST00000524006 FAM135AQ9P2D6 1515 aa15.19■□□□□ 0.02
SPIDR-222ENST00000524006 EFCAB2Q5VUJ9 269 aa15.19■□□□□ 0.02
SPIDR-222ENST00000524006 LMTK3Q96Q04 1460 aa15.19■□□□□ 0.02
SPIDR-222ENST00000524006 FBXO41Q8TF61 875 aa15.18■□□□□ 0.02
SPIDR-222ENST00000524006 YEATS2Q9ULM3 1422 aa15.17■□□□□ 0.02
SPIDR-222ENST00000524006 ZMYM4Q5VZL5 1548 aa15.17■□□□□ 0.02
SPIDR-222ENST00000524006 ARHGEF12Q9NZN5 1544 aa15.16■□□□□ 0.02
SPIDR-222ENST00000524006 ERBINQ96RT1 1412 aa15.16■□□□□ 0.02
SPIDR-222ENST00000524006 PKD2Q13563 968 aa15.15■□□□□ 0.02
SPIDR-222ENST00000524006 SIGLEC1Q9BZZ2 1709 aa15.14■□□□□ 0.01
SPIDR-222ENST00000524006 ZFYVE16Q7Z3T8 1539 aa15.14■□□□□ 0.01
SPIDR-222ENST00000524006 RIMS1Q86UR5 1692 aaKnown RBP15.14■□□□□ 0.01
SPIDR-222ENST00000524006 INO80Q9ULG1 1556 aaPredicted RBP15.14■□□□□ 0.01
SPIDR-222ENST00000524006 MSH5O43196 834 aa15.13■□□□□ 0.01
SPIDR-222ENST00000524006 SCAPERQ9BY12 1400 aa15.13■□□□□ 0.01
SPIDR-222ENST00000524006 EIF2AK4Q9P2K8 1649 aaKnown RBP15.13■□□□□ 0.01
SPIDR-222ENST00000524006 MAGI2Q86UL8 1455 aa15.13■□□□□ 0.01
SPIDR-222ENST00000524006 ATP7AQ04656 1500 aa15.12■□□□□ 0.01
SPIDR-222ENST00000524006 POGZQ7Z3K3 1410 aa15.12■□□□□ 0.01
SPIDR-222ENST00000524006 EIF4G2P78344 907 aaKnown RBP eCLIP15.12■□□□□ 0.013e-7■■□□□ 12.5
SPIDR-222ENST00000524006 L3MBTL2Q969R5 705 aa15.12■□□□□ 0.01
SPIDR-222ENST00000524006 HSPA2P54652 639 aa15.11■□□□□ 0.01
SPIDR-222ENST00000524006 DDX10Q13206 875 aaKnown RBP15.11■□□□□ 0.01
SPIDR-222ENST00000524006 SPHKAPQ2M3C7 1700 aa15.1■□□□□ 0.01
SPIDR-222ENST00000524006 MLECQ14165 292 aa15.1■□□□□ 0.01
SPIDR-222ENST00000524006 ANP32CO43423 234 aa15.09■□□□□ 0.01
SPIDR-222ENST00000524006 DEPDC5O75140 1603 aa15.08■□□□□ 0
SPIDR-222ENST00000524006 HIRIP3Q9BW71 556 aaPredicted RBP15.08■□□□□ 0
SPIDR-222ENST00000524006 TET3O43151 1660 aa15.08■□□□□ 0
SPIDR-222ENST00000524006 SPAG9O60271 1321 aaKnown RBP15.08■□□□□ 0
SPIDR-222ENST00000524006 CEP152O94986 1710 aa15.08■□□□□ 0
SPIDR-222ENST00000524006 CCDC144AA2RUR9 1427 aa15.08■□□□□ 0
SPIDR-222ENST00000524006 MYT1LQ9UL68 1186 aa15.07■□□□□ 0
SPIDR-222ENST00000524006 RTEL1-TNFRSF6BF6WH68 1400 aa15.07■□□□□ 0
SPIDR-222ENST00000524006 ATP10AO60312 1499 aa15.07■□□□□ 0
SPIDR-222ENST00000524006 HSPA5P11021 654 aaKnown RBP15.06■□□□□ 0
SPIDR-222ENST00000524006 ZNF326Q5BKZ1 582 aaKnown RBP15.05■□□□□ -0
SPIDR-222ENST00000524006 TRAPPC8Q9Y2L5 1435 aa15.05■□□□□ -0
SPIDR-222ENST00000524006 E9PCH4 1651 aa15.05■□□□□ -0
SPIDR-222ENST00000524006 KDM5CP41229 1560 aa15.04■□□□□ -0
SPIDR-222ENST00000524006 RALGAPBQ86X10 1494 aa15.04■□□□□ -0
SPIDR-222ENST00000524006 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.04■□□□□ -03e-6■■□□□ 14.5
SPIDR-222ENST00000524006 KANK1Q14678 1352 aa15.03■□□□□ -0
SPIDR-222ENST00000524006 AFAP1Q8N556 730 aa15.03■□□□□ -0
SPIDR-222ENST00000524006 TRPM1Q7Z4N2 1603 aa15.03■□□□□ -0
SPIDR-222ENST00000524006 SCAF1Q9H7N4 1312 aaKnown RBP15.02■□□□□ -0
SPIDR-222ENST00000524006 KIF1BO60333 1816 aa15.02■□□□□ -0
SPIDR-222ENST00000524006 FER1L4A9Z1Z3 1794 aa15.01□□□□□ -0.01
SPIDR-222ENST00000524006 ZNF518AQ6AHZ1 1483 aa15.01□□□□□ -0.01
SPIDR-222ENST00000524006 KIDINS220Q9ULH0 1771 aa15.01□□□□□ -0.01
SPIDR-222ENST00000524006 CNTLNQ9NXG0 1405 aa15□□□□□ -0.01
SPIDR-222ENST00000524006 CEBPAP49715 358 aaPredicted RBP15□□□□□ -0.01
SPIDR-222ENST00000524006 UHRF1BP1Q6BDS2 1440 aa15□□□□□ -0.01
SPIDR-222ENST00000524006 LAMC1P11047 1609 aa14.99□□□□□ -0.01
SPIDR-222ENST00000524006 USP47Q96K76 1375 aa14.98□□□□□ -0.01
SPIDR-222ENST00000524006 PRDM15P57071 1507 aaPredicted RBP14.97□□□□□ -0.01
SPIDR-222ENST00000524006 TRPM2O94759 1503 aa14.97□□□□□ -0.01
SPIDR-222ENST00000524006 RNF17Q9BXT8 1623 aaKnown RBP14.96□□□□□ -0.01
SPIDR-222ENST00000524006 CCER2I3L3R5 266 aa14.96□□□□□ -0.01
SPIDR-222ENST00000524006 NBPF8Q3BBV2 869 aa14.96□□□□□ -0.01
SPIDR-222ENST00000524006 CERKQ8TCT0 537 aa14.96□□□□□ -0.01
SPIDR-222ENST00000524006 GTF3C3Q9Y5Q9 886 aa14.96□□□□□ -0.01
SPIDR-222ENST00000524006 CCDC7Q96M83 1385 aa14.96□□□□□ -0.02
SPIDR-222ENST00000524006 DIP2CQ9Y2E4 1556 aa14.95□□□□□ -0.02
SPIDR-222ENST00000524006 MLH3Q9UHC1 1453 aa14.94□□□□□ -0.02
SPIDR-222ENST00000524006 REREQ9P2R6 1566 aa14.93□□□□□ -0.02
SPIDR-222ENST00000524006 CLTCL1P53675 1640 aa14.92□□□□□ -0.02
SPIDR-222ENST00000524006 PREX1Q8TCU6 1659 aa14.92□□□□□ -0.02
SPIDR-222ENST00000524006 ABCA6Q8N139 1617 aa14.92□□□□□ -0.02
SPIDR-222ENST00000524006 WASHC2AQ641Q2 1341 aa14.92□□□□□ -0.02
SPIDR-222ENST00000524006 VWDEQ8N2E2 1590 aa14.91□□□□□ -0.02
SPIDR-222ENST00000524006 ROCK2O75116 1388 aaKnown RBP14.91□□□□□ -0.02
SPIDR-222ENST00000524006 DCAF11Q8TEB1 546 aa14.91□□□□□ -0.02
SPIDR-222ENST00000524006 KDM2AQ9Y2K7 1162 aa14.91□□□□□ -0.02
SPIDR-222ENST00000524006 EFCAB6Q5THR3 1501 aa14.91□□□□□ -0.02
SPIDR-222ENST00000524006 CARD11Q9BXL7 1154 aa14.9□□□□□ -0.02
SPIDR-222ENST00000524006 MROH1Q8NDA8 1641 aa14.9□□□□□ -0.02
SPIDR-222ENST00000524006 A2MP01023 1474 aa14.89□□□□□ -0.03
SPIDR-222ENST00000524006 AGLP35573 1532 aa14.89□□□□□ -0.03
SPIDR-222ENST00000524006 CFAP65Q6ZU64 1925 aaKnown RBP14.89□□□□□ -0.03
SPIDR-222ENST00000524006 ZC3H13Q5T200 1668 aaKnown RBP14.89□□□□□ -0.03
SPIDR-222ENST00000524006 SPATA31E1Q6ZUB1 1445 aa14.89□□□□□ -0.03
SPIDR-222ENST00000524006 PRAG1Q86YV5 1406 aa14.89□□□□□ -0.03
SPIDR-222ENST00000524006 STRCQ7RTU9 1775 aa14.88□□□□□ -0.03
SPIDR-222ENST00000524006 POLR3GLQ9BT43 218 aa14.88□□□□□ -0.03
SPIDR-222ENST00000524006 KIAA1210Q9ULL0 1709 aa14.88□□□□□ -0.03
SPIDR-222ENST00000524006 DHX29Q7Z478 1369 aaKnown RBP14.87□□□□□ -0.03
SPIDR-222ENST00000524006 CAMSAP1Q5T5Y3 1602 aa14.87□□□□□ -0.03
SPIDR-222ENST00000524006 IFT172Q9UG01 1749 aa14.86□□□□□ -0.03
SPIDR-222ENST00000524006 KIF3BO15066 747 aa14.86□□□□□ -0.03
SPIDR-222ENST00000524006 DMRT2Q9Y5R5 561 aa14.86□□□□□ -0.03
SPIDR-222ENST00000524006 PLA2R1Q13018 1463 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms