RNA–Protein interactions for RNA: ENST00000523851.1

SREK1-214, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 3

Gene SREK1, Length 458 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-214ENST00000523851 TSPY10P0CW01 314 aa25.74■■□□□ 1.71
SREK1-214ENST00000523851 PKD2Q13563 968 aa25.73■■□□□ 1.71
SREK1-214ENST00000523851 TCOF1Q13428 1488 aaKnown RBP25.72■■□□□ 1.71
SREK1-214ENST00000523851 A2ML1A8K2U0 1454 aa25.71■■□□□ 1.71
SREK1-214ENST00000523851 KDM5DQ9BY66 1539 aa25.7■■□□□ 1.7
SREK1-214ENST00000523851 FAM135AQ9P2D6 1515 aa25.7■■□□□ 1.7
SREK1-214ENST00000523851 FBXO31Q5XUX0 539 aaPredicted RBP25.7■■□□□ 1.7
SREK1-214ENST00000523851 DNMT1P26358 1616 aaKnown RBP25.7■■□□□ 1.7
SREK1-214ENST00000523851 IQSEC2Q5JU85 1478 aa25.69■■□□□ 1.7
SREK1-214ENST00000523851 WASHC2CQ9Y4E1 1318 aa25.68■■□□□ 1.7
SREK1-214ENST00000523851 APLP2Q06481 763 aa25.68■■□□□ 1.7
SREK1-214ENST00000523851 PZPP20742 1482 aa25.67■■□□□ 1.7
SREK1-214ENST00000523851 ZNF335Q9H4Z2 1342 aaPredicted RBP25.66■■□□□ 1.7
SREK1-214ENST00000523851 MAST1Q9Y2H9 1570 aa25.66■■□□□ 1.7
SREK1-214ENST00000523851 TNRQ92752 1358 aa25.65■■□□□ 1.7
SREK1-214ENST00000523851 MYOM3Q5VTT5 1437 aa25.63■■□□□ 1.69
SREK1-214ENST00000523851 MIA2Q96PC5 1412 aa25.63■■□□□ 1.69
SREK1-214ENST00000523851 RNF17Q9BXT8 1623 aaKnown RBP25.59■■□□□ 1.69
SREK1-214ENST00000523851 POLR1AO95602 1720 aaPredicted RBP25.57■■□□□ 1.68
SREK1-214ENST00000523851 EIF2AK4Q9P2K8 1649 aaKnown RBP25.56■■□□□ 1.68
SREK1-214ENST00000523851 NLRP1Q9C000 1473 aa25.54■■□□□ 1.68
SREK1-214ENST00000523851 ABCC3O15438 1527 aa25.54■■□□□ 1.68
SREK1-214ENST00000523851 NEURL4Q96JN8 1562 aa25.54■■□□□ 1.68
SREK1-214ENST00000523851 ZC3H13Q5T200 1668 aaKnown RBP25.54■■□□□ 1.68
SREK1-214ENST00000523851 MROH1Q8NDA8 1641 aa25.52■■□□□ 1.68
SREK1-214ENST00000523851 THEMISQ8N1K5 641 aaPredicted RBP25.52■■□□□ 1.68
SREK1-214ENST00000523851 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.52■■□□□ 1.68
SREK1-214ENST00000523851 UGGT1Q9NYU2 1555 aa25.52■■□□□ 1.68
SREK1-214ENST00000523851 ANKLE2Q86XL3 938 aa25.5■■□□□ 1.67
SREK1-214ENST00000523851 DUOX2Q9NRD8 1548 aa25.5■■□□□ 1.67
SREK1-214ENST00000523851 SPATA31D1Q6ZQQ2 1576 aa25.49■■□□□ 1.67
SREK1-214ENST00000523851 UBAP1LF5GYI3 381 aa25.48■■□□□ 1.67
SREK1-214ENST00000523851 PTPN23Q9H3S7 1636 aa25.48■■□□□ 1.67
SREK1-214ENST00000523851 ABCC5O15440 1437 aa25.47■■□□□ 1.67
SREK1-214ENST00000523851 DISP3Q9P2K9 1392 aa25.47■■□□□ 1.67
SREK1-214ENST00000523851 CROCC2H7BZ55 1655 aa25.47■■□□□ 1.67
SREK1-214ENST00000523851 CEP152O94986 1710 aa25.46■■□□□ 1.67
SREK1-214ENST00000523851 MED14O60244 1454 aa25.45■■□□□ 1.66
SREK1-214ENST00000523851 ERVK-7P63135 1459 aa25.45■■□□□ 1.66
SREK1-214ENST00000523851 DEPDC5O75140 1603 aa25.45■■□□□ 1.66
SREK1-214ENST00000523851 SHANK2Q9UPX8 1470 aa25.44■■□□□ 1.66
SREK1-214ENST00000523851 CFAP65Q6ZU64 1925 aaKnown RBP25.43■■□□□ 1.66
SREK1-214ENST00000523851 KIF15Q9NS87 1388 aa25.43■■□□□ 1.66
SREK1-214ENST00000523851 RRP7BPQ9NSQ0 103 aa25.42■■□□□ 1.66
SREK1-214ENST00000523851 CPS1P31327 1500 aa25.42■■□□□ 1.66
SREK1-214ENST00000523851 NPHP4O75161 1426 aaPredicted RBP25.41■■□□□ 1.66
SREK1-214ENST00000523851 DAPK1P53355 1430 aa25.41■■□□□ 1.66
SREK1-214ENST00000523851 VWDEQ8N2E2 1590 aa25.4■■□□□ 1.66
SREK1-214ENST00000523851 ERBINQ96RT1 1412 aa25.4■■□□□ 1.66
SREK1-214ENST00000523851 ILDR2Q71H61 639 aa25.4■■□□□ 1.66
SREK1-214ENST00000523851 FGD6Q6ZV73 1430 aa25.39■■□□□ 1.66
SREK1-214ENST00000523851 PRDM15P57071 1507 aaPredicted RBP25.38■■□□□ 1.65
SREK1-214ENST00000523851 IQGAP1P46940 1657 aa25.37■■□□□ 1.65
SREK1-214ENST00000523851 ARHGAP31Q2M1Z3 1444 aa25.37■■□□□ 1.65
SREK1-214ENST00000523851 UBR1Q8IWV7 1749 aa25.36■■□□□ 1.65
SREK1-214ENST00000523851 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.32■■□□□ 1.642e-7■■■□□ 16.1
SREK1-214ENST00000523851 CHIC2Q9UKJ5 165 aa25.32■■□□□ 1.64
SREK1-214ENST00000523851 TOM1O60784 492 aa25.31■■□□□ 1.64
SREK1-214ENST00000523851 ANKRD30AQ9BXX3 1397 aa25.3■■□□□ 1.64
SREK1-214ENST00000523851 STRCP1A6NGW2 1772 aa25.29■■□□□ 1.64
SREK1-214ENST00000523851 PIP4K2BP78356 416 aa25.27■■□□□ 1.64
SREK1-214ENST00000523851 KANK1Q14678 1352 aa25.27■■□□□ 1.64
SREK1-214ENST00000523851 ARHGAP23Q9P227 1491 aa25.27■■□□□ 1.64
SREK1-214ENST00000523851 SLIT1O75093 1534 aa25.27■■□□□ 1.64
SREK1-214ENST00000523851 LTKP29376 864 aa25.26■■□□□ 1.63
SREK1-214ENST00000523851 SCAF1Q9H7N4 1312 aaKnown RBP25.25■■□□□ 1.63
SREK1-214ENST00000523851 SCAF11Q99590 1463 aaKnown RBP25.25■■□□□ 1.63
SREK1-214ENST00000523851 LMTK2Q8IWU2 1503 aa25.24■■□□□ 1.63
SREK1-214ENST00000523851 HSPA1LP34931 641 aa25.24■■□□□ 1.63
SREK1-214ENST00000523851 PIK3C2BO00750 1634 aa25.23■■□□□ 1.63
SREK1-214ENST00000523851 ALKQ9UM73 1620 aa25.23■■□□□ 1.63
SREK1-214ENST00000523851 TXNDC2Q86VQ3 553 aa25.23■■□□□ 1.63
SREK1-214ENST00000523851 SOCS7O14512 581 aa25.22■■□□□ 1.63
SREK1-214ENST00000523851 LRRC7Q96NW7 1537 aa25.22■■□□□ 1.63
SREK1-214ENST00000523851 ADGRL2O95490 1459 aa25.21■■□□□ 1.63
SREK1-214ENST00000523851 IDI1Q13907 227 aa25.18■■□□□ 1.62
SREK1-214ENST00000523851 FAM50AQ14320 339 aaKnown RBP25.18■■□□□ 1.62
SREK1-214ENST00000523851 EID1Q9Y6B2 187 aa25.18■■□□□ 1.62
SREK1-214ENST00000523851 SYNMO15061 1565 aa25.18■■□□□ 1.62
SREK1-214ENST00000523851 TMEM2Q9UHN6 1383 aa25.18■■□□□ 1.62
SREK1-214ENST00000523851 KDM5AP29375 1690 aaKnown RBP25.17■■□□□ 1.62
SREK1-214ENST00000523851 STAG3Q9UJ98 1225 aa25.15■■□□□ 1.62
SREK1-214ENST00000523851 NOS1P29475 1434 aa25.14■■□□□ 1.62
SREK1-214ENST00000523851 EFCAB6Q5THR3 1501 aa25.14■■□□□ 1.62
SREK1-214ENST00000523851 ANKRD50Q9ULJ7 1429 aa25.12■■□□□ 1.61
SREK1-214ENST00000523851 XIRP1Q702N8 1843 aaKnown RBP25.09■■□□□ 1.61
SREK1-214ENST00000523851 MED1Q15648 1581 aaPredicted RBP25.07■■□□□ 1.6
SREK1-214ENST00000523851 SLC52A1Q9NWF4 448 aa25.07■■□□□ 1.6
SREK1-214ENST00000523851 TET3O43151 1660 aa25.07■■□□□ 1.6
SREK1-214ENST00000523851 PPARGC1BQ86YN6 1023 aaKnown RBP25.06■■□□□ 1.6
SREK1-214ENST00000523851 ADGRB3O60242 1522 aa25.06■■□□□ 1.6
SREK1-214ENST00000523851 RPRD2Q5VT52 1461 aaKnown RBP25.05■■□□□ 1.6
SREK1-214ENST00000523851 ROCK1Q13464 1354 aa25.02■■□□□ 1.6
SREK1-214ENST00000523851 SLC26A8Q96RN1 970 aa25.01■■□□□ 1.59
SREK1-214ENST00000523851 KCNA6P17658 529 aa25■■□□□ 1.59
SREK1-214ENST00000523851 UNC13BO14795 1591 aa25■■□□□ 1.59
SREK1-214ENST00000523851 GCC2Q8IWJ2 1684 aa24.99■■□□□ 1.59
SREK1-214ENST00000523851 SENP3Q9H4L4 574 aaPredicted RBP24.99■■□□□ 1.59
SREK1-214ENST00000523851 MYO5BQ9ULV0 1848 aa24.98■■□□□ 1.59
SREK1-214ENST00000523851 TMEM94Q12767 1356 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms