RNA–Protein interactions for RNA: ENST00000523702.5

CPS1-211, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 4

Gene CPS1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-211ENST00000523702 IL27Q8NEV9 243 aa11.8□□□□□ -0.52
CPS1-211ENST00000523702 ZNF454Q8N9F8 522 aa11.79□□□□□ -0.52
CPS1-211ENST00000523702 MAMSTRQ6ZN01 415 aa11.78□□□□□ -0.52
CPS1-211ENST00000523702 C6orf132Q5T0Z8 1188 aa11.77□□□□□ -0.53
CPS1-211ENST00000523702 ADAM33Q9BZ11 813 aa11.77□□□□□ -0.53
CPS1-211ENST00000523702 FAM161AQ3B820 660 aa11.76□□□□□ -0.53
CPS1-211ENST00000523702 FBXW7Q969H0 707 aa11.76□□□□□ -0.53
CPS1-211ENST00000523702 ZDHHC16Q969W1 377 aa11.76□□□□□ -0.53
CPS1-211ENST00000523702 LHX6Q9UPM6 363 aa11.76□□□□□ -0.53
CPS1-211ENST00000523702 AMHR2Q16671 573 aa11.75□□□□□ -0.53
CPS1-211ENST00000523702 PHOX2BQ99453 314 aa11.75□□□□□ -0.53
CPS1-211ENST00000523702 FAM117AQ9C073 453 aa11.75□□□□□ -0.53
CPS1-211ENST00000523702 ZSWIM6Q9HCJ5 1215 aa11.75□□□□□ -0.53
CPS1-211ENST00000523702 TIMELESSQ9UNS1 1208 aa11.75□□□□□ -0.53
CPS1-211ENST00000523702 PARP9Q8IXQ6 854 aa11.74□□□□□ -0.53
CPS1-211ENST00000523702 ZNF710Q8N1W2 664 aa11.74□□□□□ -0.53
CPS1-211ENST00000523702 OTUD5Q96G74 571 aa11.74□□□□□ -0.53
CPS1-211ENST00000523702 REPIN1Q9BWE0 567 aaKnown RBP11.74□□□□□ -0.53
CPS1-211ENST00000523702 RIMBP2O15034 1052 aa11.72□□□□□ -0.53
CPS1-211ENST00000523702 PADI6Q6TGC4 694 aa11.69□□□□□ -0.54
CPS1-211ENST00000523702 PLEKHG3A1L390 1219 aa11.68□□□□□ -0.54
CPS1-211ENST00000523702 NLRP7Q8WX94 980 aa11.68□□□□□ -0.54
CPS1-211ENST00000523702 COL9A1P20849 921 aa11.67□□□□□ -0.54
CPS1-211ENST00000523702 HOXB1P14653 301 aaPredicted RBP11.66□□□□□ -0.54
CPS1-211ENST00000523702 FAM198AQ9UFP1 575 aa11.66□□□□□ -0.54
CPS1-211ENST00000523702 MS4A1P11836 297 aa11.65□□□□□ -0.54
CPS1-211ENST00000523702 TTLL12Q14166 644 aaPredicted RBP11.65□□□□□ -0.54
CPS1-211ENST00000523702 TTC13Q8NBP0 860 aa11.65□□□□□ -0.54
CPS1-211ENST00000523702 TMUB1Q9BVT8 246 aa11.65□□□□□ -0.54
CPS1-211ENST00000523702 GIGYF2Q6Y7W6 1299 aaKnown RBP11.64□□□□□ -0.55
CPS1-211ENST00000523702 PRSS12P56730 875 aa11.63□□□□□ -0.55
CPS1-211ENST00000523702 MDM2Q00987 491 aaPredicted RBP11.63□□□□□ -0.55
CPS1-211ENST00000523702 CERKQ8TCT0 537 aa11.63□□□□□ -0.55
CPS1-211ENST00000523702 ADGRG1Q9Y653 693 aa11.63□□□□□ -0.55
CPS1-211ENST00000523702 METTL3Q86U44 580 aaKnown RBP11.62□□□□□ -0.55
CPS1-211ENST00000523702 CDCA7LQ96GN5 454 aa11.62□□□□□ -0.55
CPS1-211ENST00000523702 C3orf80F5H4A9 247 aa11.61□□□□□ -0.55
CPS1-211ENST00000523702 SNPHO15079 494 aa11.61□□□□□ -0.55
CPS1-211ENST00000523702 PPP4R3BQ5MIZ7 849 aa11.61□□□□□ -0.55
CPS1-211ENST00000523702 BCL2L12Q9HB09 334 aa11.61□□□□□ -0.55
CPS1-211ENST00000523702 PXYLP1Q8TE99 480 aa11.6□□□□□ -0.55
CPS1-211ENST00000523702 LHX8Q68G74 356 aa11.59□□□□□ -0.55
CPS1-211ENST00000523702 TSKSQ9UJT2 592 aa11.58□□□□□ -0.56
CPS1-211ENST00000523702 OATP04181 439 aa11.57□□□□□ -0.56
CPS1-211ENST00000523702 SSTR3P32745 418 aaPredicted RBP11.56□□□□□ -0.56
CPS1-211ENST00000523702 DDRGK1Q96HY6 314 aa11.56□□□□□ -0.56
CPS1-211ENST00000523702 GPCPD1Q9NPB8 672 aa11.56□□□□□ -0.56
CPS1-211ENST00000523702 RBM27Q9P2N5 1060 aaKnown RBP11.56□□□□□ -0.56
CPS1-211ENST00000523702 PSDA5PKW4 1024 aaPredicted RBP11.55□□□□□ -0.56
CPS1-211ENST00000523702 CLCN1P35523 988 aa11.55□□□□□ -0.56
CPS1-211ENST00000523702 PTPREP23469 700 aa11.54□□□□□ -0.56
CPS1-211ENST00000523702 EYA1Q99502 592 aa11.53□□□□□ -0.56
CPS1-211ENST00000523702 PPP1R3GB7ZBB8 358 aa11.52□□□□□ -0.57
CPS1-211ENST00000523702 PROX2Q3B8N5 592 aa11.52□□□□□ -0.57
CPS1-211ENST00000523702 POTEEQ6S8J3 1075 aa11.52□□□□□ -0.57
CPS1-211ENST00000523702 FAM217BQ9NTX9 383 aaPredicted RBP11.52□□□□□ -0.57
CPS1-211ENST00000523702 C14orf37Q86TY3 774 aa11.51□□□□□ -0.57
CPS1-211ENST00000523702 DAXXQ9UER7 740 aaPredicted RBP11.51□□□□□ -0.57
CPS1-211ENST00000523702 PSEN2P49810 448 aa11.5□□□□□ -0.57
CPS1-211ENST00000523702 NUDT18Q6ZVK8 323 aa11.5□□□□□ -0.57
CPS1-211ENST00000523702 KCNK17Q96T54 332 aa11.5□□□□□ -0.57
CPS1-211ENST00000523702 RCCD1A6NED2 376 aa11.49□□□□□ -0.57
CPS1-211ENST00000523702 ST18O60284 1047 aa11.49□□□□□ -0.57
CPS1-211ENST00000523702 RBM46Q8TBY0 533 aaKnown RBP11.49□□□□□ -0.57
CPS1-211ENST00000523702 TRIM6-TRIM34B2RNG4 842 aa11.48□□□□□ -0.57
CPS1-211ENST00000523702 SMAPO00193 183 aa11.48□□□□□ -0.57
CPS1-211ENST00000523702 BEGAINQ9BUH8 593 aa11.48□□□□□ -0.57
CPS1-211ENST00000523702 TATDN2Q93075 761 aa11.47□□□□□ -0.57
CPS1-211ENST00000523702 VARS2Q5ST30 1063 aaKnown RBP11.46□□□□□ -0.57
CPS1-211ENST00000523702 MARVELD3Q96A59 401 aa11.46□□□□□ -0.57
CPS1-211ENST00000523702 PNMA3Q9UL41 463 aa11.46□□□□□ -0.57
CPS1-211ENST00000523702 AXIN2Q9Y2T1 843 aa11.46□□□□□ -0.57
CPS1-211ENST00000523702 ERBB3P21860 1342 aa11.45□□□□□ -0.58
CPS1-211ENST00000523702 ZBED2Q9BTP6 218 aa11.44□□□□□ -0.58
CPS1-211ENST00000523702 DMRTA1Q5VZB9 504 aa11.43□□□□□ -0.58
CPS1-211ENST00000523702 GOPCQ9HD26 462 aa11.43□□□□□ -0.58
CPS1-211ENST00000523702 KIAA1468Q9P260 1216 aa11.43□□□□□ -0.58
CPS1-211ENST00000523702 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.42□□□□□ -0.58
CPS1-211ENST00000523702 POTEB3A0JP26 581 aa11.42□□□□□ -0.58
CPS1-211ENST00000523702 POTEBQ6S5H4 581 aa11.42□□□□□ -0.58
CPS1-211ENST00000523702 PACS2Q86VP3 889 aa11.42□□□□□ -0.58
CPS1-211ENST00000523702 PROCA1Q8NCQ7 364 aaPredicted RBP11.41□□□□□ -0.58
CPS1-211ENST00000523702 SH3D19Q5HYK7 790 aa11.4□□□□□ -0.58
CPS1-211ENST00000523702 ERICH6Q7L0X2 663 aa11.4□□□□□ -0.58
CPS1-211ENST00000523702 POLR3EQ9NVU0 708 aa11.4□□□□□ -0.58
CPS1-211ENST00000523702 NBPF26B4DH59 902 aa11.39□□□□□ -0.59
CPS1-211ENST00000523702 ARHGAP33O14559 1287 aa11.39□□□□□ -0.59
CPS1-211ENST00000523702 FAM205CA6NFA0 338 aa11.38□□□□□ -0.59
CPS1-211ENST00000523702 ONECUT3O60422 494 aaPredicted RBP11.38□□□□□ -0.59
CPS1-211ENST00000523702 EMP3P54852 163 aa11.38□□□□□ -0.59
CPS1-211ENST00000523702 SKIV2LQ15477 1246 aaKnown RBP11.38□□□□□ -0.59
CPS1-211ENST00000523702 FAM163AQ96GL9 167 aaPredicted RBP11.38□□□□□ -0.59
CPS1-211ENST00000523702 DNAJB2P25686 324 aa11.37□□□□□ -0.59
CPS1-211ENST00000523702 PCMTD1Q96MG8 357 aaPredicted RBP11.37□□□□□ -0.59
CPS1-211ENST00000523702 TMEM134Q9H6X4 195 aa11.37□□□□□ -0.59
CPS1-211ENST00000523702 DDX11L8A8MPP1 907 aa11.36□□□□□ -0.59
CPS1-211ENST00000523702 CD46P15529 392 aa11.36□□□□□ -0.59
CPS1-211ENST00000523702 MYSM1Q5VVJ2 828 aa11.36□□□□□ -0.59
CPS1-211ENST00000523702 TBC1D2Q9BYX2 928 aa11.36□□□□□ -0.59
CPS1-211ENST00000523702 LCE2DQ5TA82 110 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms