RNA–Protein interactions for RNA: ENST00000523573.5

TVP23C-207, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-207ENST00000523573 TYW1BQ6NUM6 668 aa13.44□□□□□ -0.26
TVP23C-207ENST00000523573 PHF14O94880 888 aa13.42□□□□□ -0.26
TVP23C-207ENST00000523573 LAPTM4BQ86VI4 370 aa13.4□□□□□ -0.26
TVP23C-207ENST00000523573 ITGBL1O95965 494 aaPredicted RBP13.39□□□□□ -0.27
TVP23C-207ENST00000523573 BCAMP50895 628 aa13.38□□□□□ -0.27
TVP23C-207ENST00000523573 SOWAHBA6NEL2 793 aa13.37□□□□□ -0.27
TVP23C-207ENST00000523573 DCAF8L2P0C7V8 631 aa13.37□□□□□ -0.27
TVP23C-207ENST00000523573 KIAA1468Q9P260 1216 aa13.37□□□□□ -0.27
TVP23C-207ENST00000523573 CADPS2Q86UW7 1296 aa13.36□□□□□ -0.27
TVP23C-207ENST00000523573 NYAP1Q6ZVC0 841 aa13.35□□□□□ -0.27
TVP23C-207ENST00000523573 ONECUT3O60422 494 aaPredicted RBP13.34□□□□□ -0.27
TVP23C-207ENST00000523573 ZFRQ96KR1 1074 aaKnown RBP13.34□□□□□ -0.27
TVP23C-207ENST00000523573 EPAS1Q99814 870 aa13.34□□□□□ -0.27
TVP23C-207ENST00000523573 C6orf132Q5T0Z8 1188 aa13.32□□□□□ -0.28
TVP23C-207ENST00000523573 CAMK2BQ13554 666 aa13.3□□□□□ -0.28
TVP23C-207ENST00000523573 WBP1LQ9NX94 342 aa13.29□□□□□ -0.28
TVP23C-207ENST00000523573 SEPT9Q9UHD8 586 aaPredicted RBP13.29□□□□□ -0.28
TVP23C-207ENST00000523573 DPYSL4O14531 572 aa13.28□□□□□ -0.28
TVP23C-207ENST00000523573 TRIM6-TRIM34B2RNG4 842 aa13.27□□□□□ -0.29
TVP23C-207ENST00000523573 KCNC4Q03721 635 aa13.26□□□□□ -0.29
TVP23C-207ENST00000523573 FAM98CQ17RN3 349 aaKnown RBP13.26□□□□□ -0.29
TVP23C-207ENST00000523573 RBM33Q96EV2 1170 aaKnown RBP13.25□□□□□ -0.29
TVP23C-207ENST00000523573 DDX12PQ92771 950 aa13.22□□□□□ -0.29
TVP23C-207ENST00000523573 LRCH3Q96II8 777 aa13.22□□□□□ -0.29
TVP23C-207ENST00000523573 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.22□□□□□ -0.29
TVP23C-207ENST00000523573 TSR3Q9UJK0 312 aaKnown RBP13.22□□□□□ -0.29
TVP23C-207ENST00000523573 HPS5Q9UPZ3 1129 aa13.2□□□□□ -0.3
TVP23C-207ENST00000523573 Q6ZNB5 142 aa13.17□□□□□ -0.3
TVP23C-207ENST00000523573 PACS2Q86VP3 889 aa13.16□□□□□ -0.3
TVP23C-207ENST00000523573 EN1Q05925 392 aaPredicted RBP13.15□□□□□ -0.3
TVP23C-207ENST00000523573 MAP3K7O43318 606 aa13.14□□□□□ -0.31
TVP23C-207ENST00000523573 NBR1Q14596 966 aa13.14□□□□□ -0.31
TVP23C-207ENST00000523573 TSKSQ9UJT2 592 aa13.13□□□□□ -0.31
TVP23C-207ENST00000523573 PDIA6Q15084 440 aa13.11□□□□□ -0.31
TVP23C-207ENST00000523573 TSR1Q2NL82 804 aaKnown RBP13.11□□□□□ -0.31
TVP23C-207ENST00000523573 PPP4CP60510 307 aa13.1□□□□□ -0.31
TVP23C-207ENST00000523573 SPDYE16A6NNV3 312 aaPredicted RBP13.07□□□□□ -0.32
TVP23C-207ENST00000523573 LAPTM4AQ15012 233 aa13.07□□□□□ -0.32
TVP23C-207ENST00000523573 CDCA7LQ96GN5 454 aa13.05□□□□□ -0.32
TVP23C-207ENST00000523573 PRSS12P56730 875 aa13.03□□□□□ -0.32
TVP23C-207ENST00000523573 SAMD7Q7Z3H4 446 aa13.03□□□□□ -0.32
TVP23C-207ENST00000523573 SMAPO00193 183 aa13.02□□□□□ -0.33
TVP23C-207ENST00000523573 TJAP1Q5JTD0 557 aa13.02□□□□□ -0.33
TVP23C-207ENST00000523573 CERKQ8TCT0 537 aa13.02□□□□□ -0.33
TVP23C-207ENST00000523573 BBXQ8WY36 941 aaPredicted RBP13.02□□□□□ -0.33
TVP23C-207ENST00000523573 NBPF26B4DH59 902 aa12.99□□□□□ -0.33
TVP23C-207ENST00000523573 GFRA3O60609 400 aa12.99□□□□□ -0.33
TVP23C-207ENST00000523573 FAM198AQ9UFP1 575 aa12.99□□□□□ -0.33
TVP23C-207ENST00000523573 TATDN2Q93075 761 aa12.97□□□□□ -0.33
TVP23C-207ENST00000523573 MTRQ99707 1265 aa12.97□□□□□ -0.33
TVP23C-207ENST00000523573 IL21Q9HBE4 155 aa12.97□□□□□ -0.33
TVP23C-207ENST00000523573 PNMA3Q9UL41 463 aa12.97□□□□□ -0.33
TVP23C-207ENST00000523573 PRKD2Q9BZL6 878 aa12.96□□□□□ -0.33
TVP23C-207ENST00000523573 GRXCR2A6NFK2 248 aa12.95□□□□□ -0.34
TVP23C-207ENST00000523573 PRIM1P49642 420 aaKnown RBP12.95□□□□□ -0.34
TVP23C-207ENST00000523573 E2F4Q16254 413 aa12.95□□□□□ -0.34
TVP23C-207ENST00000523573 C3orf80F5H4A9 247 aa12.94□□□□□ -0.34
TVP23C-207ENST00000523573 HDGFP51858 240 aaKnown RBP12.93□□□□□ -0.34
TVP23C-207ENST00000523573 TRAF7Q6Q0C0 670 aa12.93□□□□□ -0.34
TVP23C-207ENST00000523573 ARIH1Q9Y4X5 557 aaPredicted RBP12.93□□□□□ -0.34
TVP23C-207ENST00000523573 RNF40O75150 1001 aa12.92□□□□□ -0.34
TVP23C-207ENST00000523573 PPP1R18Q6NYC8 613 aa12.92□□□□□ -0.34
TVP23C-207ENST00000523573 LCE2BO14633 110 aa12.91□□□□□ -0.34
TVP23C-207ENST00000523573 SPRYD3Q8NCJ5 442 aa12.91□□□□□ -0.34
TVP23C-207ENST00000523573 V9GY48 417 aaPredicted RBP12.91□□□□□ -0.34
TVP23C-207ENST00000523573 RBM27Q9P2N5 1060 aaKnown RBP12.9□□□□□ -0.34
TVP23C-207ENST00000523573 NRG2O14511 850 aaPredicted RBP12.89□□□□□ -0.35
TVP23C-207ENST00000523573 NUDT18Q6ZVK8 323 aa12.89□□□□□ -0.35
TVP23C-207ENST00000523573 ZNF516Q92618 1163 aa12.88□□□□□ -0.35
TVP23C-207ENST00000523573 CDHR5Q9HBB8 845 aa12.88□□□□□ -0.35
TVP23C-207ENST00000523573 WDR70Q9NW82 654 aa12.88□□□□□ -0.35
TVP23C-207ENST00000523573 OSBPP22059 807 aa12.87□□□□□ -0.35
TVP23C-207ENST00000523573 APLP1P51693 650 aa12.87□□□□□ -0.35
TVP23C-207ENST00000523573 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.87□□□□□ -0.35
TVP23C-207ENST00000523573 NECTIN2Q92692 538 aa12.86□□□□□ -0.35
TVP23C-207ENST00000523573 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.85□□□□□ -0.35
TVP23C-207ENST00000523573 SLF2Q8IX21 1173 aa12.81□□□□□ -0.36
TVP23C-207ENST00000523573 GGCXP38435 758 aa12.8□□□□□ -0.36
TVP23C-207ENST00000523573 TTC13Q8NBP0 860 aa12.8□□□□□ -0.36
TVP23C-207ENST00000523573 NKX2-3Q8TAU0 364 aa12.8□□□□□ -0.36
TVP23C-207ENST00000523573 SWT1Q5T5J6 900 aaKnown RBP12.79□□□□□ -0.36
TVP23C-207ENST00000523573 COPS2P61201 443 aa12.78□□□□□ -0.36
TVP23C-207ENST00000523573 PADI6Q6TGC4 694 aa12.78□□□□□ -0.36
TVP23C-207ENST00000523573 PDZRN3Q9UPQ7 1066 aa12.78□□□□□ -0.36
TVP23C-207ENST00000523573 SLC4A3P48751 1232 aa12.77□□□□□ -0.37
TVP23C-207ENST00000523573 NPDC1Q9NQX5 325 aaPredicted RBP12.76□□□□□ -0.37
TVP23C-207ENST00000523573 TMUB1Q9BVT8 246 aa12.74□□□□□ -0.37
TVP23C-207ENST00000523573 ZPR1O75312 459 aa12.72□□□□□ -0.37
TVP23C-207ENST00000523573 CFAP44Q96MT7 982 aa12.72□□□□□ -0.37
TVP23C-207ENST00000523573 PRR14Q9BWN1 585 aa12.72□□□□□ -0.37
TVP23C-207ENST00000523573 PAXIP1Q6ZW49 1069 aaPredicted RBP12.71□□□□□ -0.37
TVP23C-207ENST00000523573 EYA1Q99502 592 aa12.71□□□□□ -0.37
TVP23C-207ENST00000523573 ZNF787Q6DD87 383 aa12.69□□□□□ -0.38
TVP23C-207ENST00000523573 PCDHB3Q9Y5E6 796 aa12.68□□□□□ -0.38
TVP23C-207ENST00000523573 RNF223E7ERA6 249 aa12.62□□□□□ -0.39
TVP23C-207ENST00000523573 SLC19A1P41440 591 aa12.62□□□□□ -0.39
TVP23C-207ENST00000523573 BLOC1S3Q6QNY0 202 aa12.62□□□□□ -0.39
TVP23C-207ENST00000523573 DNAJB2P25686 324 aa12.6□□□□□ -0.39
TVP23C-207ENST00000523573 TRIM67Q6ZTA4 783 aa12.59□□□□□ -0.39
TVP23C-207ENST00000523573 RBM46Q8TBY0 533 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms