RNA–Protein interactions for RNA: ENST00000523406.1

LINC00534-203, long intergenic non-protein coding RNA 534, humanhuman

TSL 3 BASIC

Gene LINC00534, Length 812 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-203ENST00000523406 SNPHO15079 494 aa11.1□□□□□ -0.63
LINC00534-203ENST00000523406 MAP3K7O43318 606 aa11.09□□□□□ -0.63
LINC00534-203ENST00000523406 CDHR5Q9HBB8 845 aa11.09□□□□□ -0.63
LINC00534-203ENST00000523406 NPDC1Q9NQX5 325 aaPredicted RBP11.09□□□□□ -0.63
LINC00534-203ENST00000523406 MINK1Q8N4C8 1332 aaPredicted RBP11.09□□□□□ -0.63
LINC00534-203ENST00000523406 MAP2K5Q13163 448 aa11.08□□□□□ -0.64
LINC00534-203ENST00000523406 RBM33Q96EV2 1170 aaKnown RBP11.08□□□□□ -0.64
LINC00534-203ENST00000523406 FECHP22830 423 aa11.07□□□□□ -0.64
LINC00534-203ENST00000523406 TSR1Q2NL82 804 aaKnown RBP11.07□□□□□ -0.64
LINC00534-203ENST00000523406 LHX8Q68G74 356 aa11.07□□□□□ -0.64
LINC00534-203ENST00000523406 ZNF454Q8N9F8 522 aa11.07□□□□□ -0.64
LINC00534-203ENST00000523406 TRIM66O15016 1216 aa11.06□□□□□ -0.64
LINC00534-203ENST00000523406 ZDHHC16Q969W1 377 aa11.06□□□□□ -0.64
LINC00534-203ENST00000523406 IRF6O14896 467 aa11.05□□□□□ -0.64
LINC00534-203ENST00000523406 HOXB1P14653 301 aaPredicted RBP11.05□□□□□ -0.64
LINC00534-203ENST00000523406 NEUROD2Q15784 382 aa11.05□□□□□ -0.64
LINC00534-203ENST00000523406 LHX6Q9UPM6 363 aa11.05□□□□□ -0.64
LINC00534-203ENST00000523406 C6orf132Q5T0Z8 1188 aa11.03□□□□□ -0.64
LINC00534-203ENST00000523406 CCDC102AQ96A19 550 aa11.03□□□□□ -0.64
LINC00534-203ENST00000523406 ADAM33Q9BZ11 813 aa11.03□□□□□ -0.64
LINC00534-203ENST00000523406 PSDA5PKW4 1024 aaPredicted RBP11.01□□□□□ -0.65
LINC00534-203ENST00000523406 PDE4DQ08499 809 aa11□□□□□ -0.65
LINC00534-203ENST00000523406 TMEM132AQ24JP5 1023 aa11□□□□□ -0.65
LINC00534-203ENST00000523406 CERKQ8TCT0 537 aa10.99□□□□□ -0.65
LINC00534-203ENST00000523406 PPP4R3BQ5MIZ7 849 aa10.98□□□□□ -0.65
LINC00534-203ENST00000523406 AMHR2Q16671 573 aa10.97□□□□□ -0.65
LINC00534-203ENST00000523406 RSF1Q96T23 1441 aaPredicted RBP10.97□□□□□ -0.65
LINC00534-203ENST00000523406 BCL2L12Q9HB09 334 aa10.96□□□□□ -0.65
LINC00534-203ENST00000523406 GPBP1L1Q9HC44 474 aaPredicted RBP10.96□□□□□ -0.65
LINC00534-203ENST00000523406 TTC13Q8NBP0 860 aa10.95□□□□□ -0.66
LINC00534-203ENST00000523406 RBM27Q9P2N5 1060 aaKnown RBP10.94□□□□□ -0.66
LINC00534-203ENST00000523406 KDM4CQ9H3R0 1056 aa10.93□□□□□ -0.66
LINC00534-203ENST00000523406 CECR2Q9BXF3 1484 aa10.93□□□□□ -0.66
LINC00534-203ENST00000523406 COL9A1P20849 921 aa10.92□□□□□ -0.66
LINC00534-203ENST00000523406 PADI6Q6TGC4 694 aa10.92□□□□□ -0.66
LINC00534-203ENST00000523406 PRSS12P56730 875 aa10.91□□□□□ -0.66
LINC00534-203ENST00000523406 UNC13AQ9UPW8 1703 aa10.91□□□□□ -0.66
LINC00534-203ENST00000523406 PARP9Q8IXQ6 854 aa10.9□□□□□ -0.66
LINC00534-203ENST00000523406 PPP1R3GB7ZBB8 358 aa10.89□□□□□ -0.67
LINC00534-203ENST00000523406 PTPREP23469 700 aa10.89□□□□□ -0.67
LINC00534-203ENST00000523406 CDCA7LQ96GN5 454 aa10.89□□□□□ -0.67
LINC00534-203ENST00000523406 ST18O60284 1047 aa10.88□□□□□ -0.67
LINC00534-203ENST00000523406 PHOX2BQ99453 314 aa10.88□□□□□ -0.67
LINC00534-203ENST00000523406 ADGRG1Q9Y653 693 aa10.88□□□□□ -0.67
LINC00534-203ENST00000523406 FAM161AQ3B820 660 aa10.87□□□□□ -0.67
LINC00534-203ENST00000523406 FAM198AQ9UFP1 575 aa10.87□□□□□ -0.67
LINC00534-203ENST00000523406 MROH2BQ7Z745 1585 aa10.86□□□□□ -0.67
LINC00534-203ENST00000523406 OATP04181 439 aa10.86□□□□□ -0.67
LINC00534-203ENST00000523406 METTL3Q86U44 580 aaKnown RBP10.86□□□□□ -0.67
LINC00534-203ENST00000523406 TMUB1Q9BVT8 246 aa10.86□□□□□ -0.67
LINC00534-203ENST00000523406 BAZ1AQ9NRL2 1556 aaPredicted RBP10.86□□□□□ -0.67
LINC00534-203ENST00000523406 PXYLP1Q8TE99 480 aa10.85□□□□□ -0.67
LINC00534-203ENST00000523406 BICRAQ9NZM4 1560 aa10.85□□□□□ -0.67
LINC00534-203ENST00000523406 TTLL12Q14166 644 aaPredicted RBP10.84□□□□□ -0.67
LINC00534-203ENST00000523406 REPIN1Q9BWE0 567 aaKnown RBP10.84□□□□□ -0.67
LINC00534-203ENST00000523406 ERBB3P21860 1342 aa10.84□□□□□ -0.67
LINC00534-203ENST00000523406 TSKSQ9UJT2 592 aa10.83□□□□□ -0.68
LINC00534-203ENST00000523406 VARS2Q5ST30 1063 aaKnown RBP10.82□□□□□ -0.68
LINC00534-203ENST00000523406 IL27Q8NEV9 243 aa10.82□□□□□ -0.68
LINC00534-203ENST00000523406 KCNK17Q96T54 332 aa10.82□□□□□ -0.68
LINC00534-203ENST00000523406 DAXXQ9UER7 740 aaPredicted RBP10.82□□□□□ -0.68
LINC00534-203ENST00000523406 CLCN1P35523 988 aa10.81□□□□□ -0.68
LINC00534-203ENST00000523406 GIGYF2Q6Y7W6 1299 aaKnown RBP10.81□□□□□ -0.68
LINC00534-203ENST00000523406 FAM117AQ9C073 453 aa10.81□□□□□ -0.68
LINC00534-203ENST00000523406 TRIM6-TRIM34B2RNG4 842 aa10.8□□□□□ -0.68
LINC00534-203ENST00000523406 EMP3P54852 163 aa10.8□□□□□ -0.68
LINC00534-203ENST00000523406 MDM2Q00987 491 aaPredicted RBP10.8□□□□□ -0.68
LINC00534-203ENST00000523406 POTEEQ6S8J3 1075 aa10.8□□□□□ -0.68
LINC00534-203ENST00000523406 RBM46Q8TBY0 533 aaKnown RBP10.8□□□□□ -0.68
LINC00534-203ENST00000523406 GPCPD1Q9NPB8 672 aa10.8□□□□□ -0.68
LINC00534-203ENST00000523406 GTF3C3Q9Y5Q9 886 aa10.8□□□□□ -0.68
LINC00534-203ENST00000523406 ONECUT3O60422 494 aaPredicted RBP10.79□□□□□ -0.68
LINC00534-203ENST00000523406 MARVELD3Q96A59 401 aa10.79□□□□□ -0.68
LINC00534-203ENST00000523406 EYA1Q99502 592 aa10.79□□□□□ -0.68
LINC00534-203ENST00000523406 PLEKHG3A1L390 1219 aa10.78□□□□□ -0.68
LINC00534-203ENST00000523406 C3orf80F5H4A9 247 aa10.78□□□□□ -0.68
LINC00534-203ENST00000523406 MS4A1P11836 297 aa10.78□□□□□ -0.68
LINC00534-203ENST00000523406 PSEN2P49810 448 aa10.78□□□□□ -0.68
LINC00534-203ENST00000523406 DDRGK1Q96HY6 314 aa10.78□□□□□ -0.68
LINC00534-203ENST00000523406 ZBED2Q9BTP6 218 aa10.78□□□□□ -0.68
LINC00534-203ENST00000523406 ARHGAP33O14559 1287 aa10.77□□□□□ -0.69
LINC00534-203ENST00000523406 PROX2Q3B8N5 592 aa10.77□□□□□ -0.69
LINC00534-203ENST00000523406 NLRP7Q8WX94 980 aa10.77□□□□□ -0.69
LINC00534-203ENST00000523406 KCNH8Q96L42 1107 aa10.77□□□□□ -0.69
LINC00534-203ENST00000523406 SMARCA4P51532 1647 aa10.76□□□□□ -0.69
LINC00534-203ENST00000523406 FAM163AQ96GL9 167 aaPredicted RBP10.76□□□□□ -0.69
LINC00534-203ENST00000523406 WIZO95785 1651 aa10.76□□□□□ -0.69
LINC00534-203ENST00000523406 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.75□□□□□ -0.69
LINC00534-203ENST00000523406 FAM205CA6NFA0 338 aa10.75□□□□□ -0.69
LINC00534-203ENST00000523406 NBPF26B4DH59 902 aa10.75□□□□□ -0.69
LINC00534-203ENST00000523406 LCE2DQ5TA82 110 aaPredicted RBP10.75□□□□□ -0.69
LINC00534-203ENST00000523406 NUDT18Q6ZVK8 323 aa10.75□□□□□ -0.69
LINC00534-203ENST00000523406 PACS2Q86VP3 889 aa10.75□□□□□ -0.69
LINC00534-203ENST00000523406 ZNF687Q8N1G0 1237 aa10.75□□□□□ -0.69
LINC00534-203ENST00000523406 TATDN2Q93075 761 aa10.75□□□□□ -0.69
LINC00534-203ENST00000523406 PBX2P40425 430 aa10.74□□□□□ -0.69
LINC00534-203ENST00000523406 SLC4A5Q9BY07 1137 aa10.74□□□□□ -0.69
LINC00534-203ENST00000523406 FAM217BQ9NTX9 383 aaPredicted RBP10.74□□□□□ -0.69
LINC00534-203ENST00000523406 PNMA3Q9UL41 463 aa10.74□□□□□ -0.69
LINC00534-203ENST00000523406 POTEB3A0JP26 581 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 165.3 ms