RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 PKD2Q13563 968 aa18.48■□□□□ 0.55
CTNNA1-237ENST00000523275 FBXO31Q5XUX0 539 aaPredicted RBP18.48■□□□□ 0.55
CTNNA1-237ENST00000523275 PHF23Q9BUL5 403 aaPredicted RBP18.47■□□□□ 0.55
CTNNA1-237ENST00000523275 MYO3AQ8NEV4 1616 aa18.45■□□□□ 0.54
CTNNA1-237ENST00000523275 CEP170BQ9Y4F5 1589 aaPredicted RBP18.45■□□□□ 0.54
CTNNA1-237ENST00000523275 KDM5DQ9BY66 1539 aa18.44■□□□□ 0.54
CTNNA1-237ENST00000523275 FAM135AQ9P2D6 1515 aa18.44■□□□□ 0.54
CTNNA1-237ENST00000523275 PLA2R1Q13018 1463 aa18.44■□□□□ 0.54
CTNNA1-237ENST00000523275 TNRQ92752 1358 aa18.43■□□□□ 0.54
CTNNA1-237ENST00000523275 A2ML1A8K2U0 1454 aa18.43■□□□□ 0.54
CTNNA1-237ENST00000523275 PZPP20742 1482 aa18.43■□□□□ 0.54
CTNNA1-237ENST00000523275 ZNF142P52746 1687 aaPredicted RBP18.43■□□□□ 0.54
CTNNA1-237ENST00000523275 MAST1Q9Y2H9 1570 aa18.42■□□□□ 0.54
CTNNA1-237ENST00000523275 LTBP4Q8N2S1 1624 aa18.41■□□□□ 0.54
CTNNA1-237ENST00000523275 TCOF1Q13428 1488 aaKnown RBP18.41■□□□□ 0.54
CTNNA1-237ENST00000523275 ZNF335Q9H4Z2 1342 aaPredicted RBP18.38■□□□□ 0.53
CTNNA1-237ENST00000523275 THEMISQ8N1K5 641 aaPredicted RBP18.37■□□□□ 0.53
CTNNA1-237ENST00000523275 DNMT1P26358 1616 aaKnown RBP18.37■□□□□ 0.53
CTNNA1-237ENST00000523275 IQSEC2Q5JU85 1478 aa18.35■□□□□ 0.53
CTNNA1-237ENST00000523275 ABCC5O15440 1437 aa18.35■□□□□ 0.53
CTNNA1-237ENST00000523275 RRP7BPQ9NSQ0 103 aa18.35■□□□□ 0.53
CTNNA1-237ENST00000523275 RNF17Q9BXT8 1623 aaKnown RBP18.34■□□□□ 0.53
CTNNA1-237ENST00000523275 DUOX2Q9NRD8 1548 aa18.34■□□□□ 0.53
CTNNA1-237ENST00000523275 ANKLE2Q86XL3 938 aa18.34■□□□□ 0.53
CTNNA1-237ENST00000523275 ABCC3O15438 1527 aa18.33■□□□□ 0.53
CTNNA1-237ENST00000523275 NLRP1Q9C000 1473 aa18.33■□□□□ 0.53
CTNNA1-237ENST00000523275 KIF15Q9NS87 1388 aa18.33■□□□□ 0.53
CTNNA1-237ENST00000523275 EIF2AK4Q9P2K8 1649 aaKnown RBP18.33■□□□□ 0.52
CTNNA1-237ENST00000523275 FGD6Q6ZV73 1430 aa18.32■□□□□ 0.52
CTNNA1-237ENST00000523275 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.32■□□□□ 0.52
CTNNA1-237ENST00000523275 PTPN23Q9H3S7 1636 aa18.32■□□□□ 0.52
CTNNA1-237ENST00000523275 SHANK2Q9UPX8 1470 aa18.32■□□□□ 0.52
CTNNA1-237ENST00000523275 DAPK1P53355 1430 aa18.31■□□□□ 0.52
CTNNA1-237ENST00000523275 CHIC2Q9UKJ5 165 aa18.29■□□□□ 0.52
CTNNA1-237ENST00000523275 MROH1Q8NDA8 1641 aa18.29■□□□□ 0.52
CTNNA1-237ENST00000523275 UGGT1Q9NYU2 1555 aa18.29■□□□□ 0.52
CTNNA1-237ENST00000523275 ZC3H13Q5T200 1668 aaKnown RBP18.28■□□□□ 0.52
CTNNA1-237ENST00000523275 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.28■□□□□ 0.521e-11■□□□□ 8.9
CTNNA1-237ENST00000523275 ERBINQ96RT1 1412 aa18.28■□□□□ 0.52
CTNNA1-237ENST00000523275 UBAP1LF5GYI3 381 aa18.27■□□□□ 0.52
CTNNA1-237ENST00000523275 ANKRD30AQ9BXX3 1397 aa18.27■□□□□ 0.51
CTNNA1-237ENST00000523275 ERVK-7P63135 1459 aa18.26■□□□□ 0.51
CTNNA1-237ENST00000523275 SPATA31D1Q6ZQQ2 1576 aa18.26■□□□□ 0.51
CTNNA1-237ENST00000523275 SENP3Q9H4L4 574 aaPredicted RBP18.26■□□□□ 0.51
CTNNA1-237ENST00000523275 NEURL4Q96JN8 1562 aa18.25■□□□□ 0.51
CTNNA1-237ENST00000523275 CROCC2H7BZ55 1655 aa18.25■□□□□ 0.51
CTNNA1-237ENST00000523275 KANK1Q14678 1352 aa18.24■□□□□ 0.51
CTNNA1-237ENST00000523275 NPHP4O75161 1426 aaPredicted RBP18.23■□□□□ 0.51
CTNNA1-237ENST00000523275 ARHGAP31Q2M1Z3 1444 aa18.23■□□□□ 0.51
CTNNA1-237ENST00000523275 POLR1AO95602 1720 aaPredicted RBP18.23■□□□□ 0.51
CTNNA1-237ENST00000523275 FAM50AQ14320 339 aaKnown RBP18.23■□□□□ 0.51
CTNNA1-237ENST00000523275 MED14O60244 1454 aa18.22■□□□□ 0.51
CTNNA1-237ENST00000523275 CEP152O94986 1710 aa18.22■□□□□ 0.51
CTNNA1-237ENST00000523275 PRDM15P57071 1507 aaPredicted RBP18.22■□□□□ 0.51
CTNNA1-237ENST00000523275 DEPDC5O75140 1603 aa18.2■□□□□ 0.5
CTNNA1-237ENST00000523275 CPS1P31327 1500 aa18.19■□□□□ 0.5
CTNNA1-237ENST00000523275 CFAP65Q6ZU64 1925 aaKnown RBP18.18■□□□□ 0.5
CTNNA1-237ENST00000523275 DISP3Q9P2K9 1392 aa18.17■□□□□ 0.5
CTNNA1-237ENST00000523275 TXNDC2Q86VQ3 553 aa18.17■□□□□ 0.5
CTNNA1-237ENST00000523275 TOM1O60784 492 aa18.16■□□□□ 0.5
CTNNA1-237ENST00000523275 VWDEQ8N2E2 1590 aa18.16■□□□□ 0.5
CTNNA1-237ENST00000523275 ADGRL2O95490 1459 aa18.15■□□□□ 0.5
CTNNA1-237ENST00000523275 LTKP29376 864 aa18.15■□□□□ 0.5
CTNNA1-237ENST00000523275 STAG3Q9UJ98 1225 aa18.15■□□□□ 0.5
CTNNA1-237ENST00000523275 EID1Q9Y6B2 187 aa18.14■□□□□ 0.49
CTNNA1-237ENST00000523275 LMTK2Q8IWU2 1503 aa18.13■□□□□ 0.49
CTNNA1-237ENST00000523275 IQGAP1P46940 1657 aa18.13■□□□□ 0.49
CTNNA1-237ENST00000523275 UBR1Q8IWV7 1749 aa18.13■□□□□ 0.49
CTNNA1-237ENST00000523275 IDI1Q13907 227 aa18.13■□□□□ 0.49
CTNNA1-237ENST00000523275 SCAF11Q99590 1463 aaKnown RBP18.13■□□□□ 0.49
CTNNA1-237ENST00000523275 PIP4K2BP78356 416 aa18.12■□□□□ 0.49
CTNNA1-237ENST00000523275 SCAF1Q9H7N4 1312 aaKnown RBP18.12■□□□□ 0.49
CTNNA1-237ENST00000523275 ANKRD50Q9ULJ7 1429 aa18.12■□□□□ 0.49
CTNNA1-237ENST00000523275 ARHGAP23Q9P227 1491 aa18.12■□□□□ 0.49
CTNNA1-237ENST00000523275 SLIT1O75093 1534 aa18.11■□□□□ 0.49
CTNNA1-237ENST00000523275 TMEM2Q9UHN6 1383 aa18.1■□□□□ 0.49
CTNNA1-237ENST00000523275 SLC52A1Q9NWF4 448 aa18.08■□□□□ 0.48
CTNNA1-237ENST00000523275 NOS1P29475 1434 aa18.07■□□□□ 0.48
CTNNA1-237ENST00000523275 HSPA1LP34931 641 aa18.07■□□□□ 0.48
CTNNA1-237ENST00000523275 ILDR2Q71H61 639 aa18.07■□□□□ 0.48
CTNNA1-237ENST00000523275 PIK3C2BO00750 1634 aa18.07■□□□□ 0.48
CTNNA1-237ENST00000523275 EFCAB6Q5THR3 1501 aa18.06■□□□□ 0.48
CTNNA1-237ENST00000523275 LRRC7Q96NW7 1537 aa18.06■□□□□ 0.48
CTNNA1-237ENST00000523275 PPARGC1BQ86YN6 1023 aaKnown RBP18.04■□□□□ 0.48
CTNNA1-237ENST00000523275 SYNMO15061 1565 aa18.04■□□□□ 0.48
CTNNA1-237ENST00000523275 ROCK1Q13464 1354 aa18.04■□□□□ 0.48
CTNNA1-237ENST00000523275 RPRD2Q5VT52 1461 aaKnown RBP18.03■□□□□ 0.48
CTNNA1-237ENST00000523275 STRCP1A6NGW2 1772 aa18.02■□□□□ 0.48
CTNNA1-237ENST00000523275 ITGAEP38570 1179 aa18.02■□□□□ 0.48
CTNNA1-237ENST00000523275 KDM5AP29375 1690 aaKnown RBP18.01■□□□□ 0.47
CTNNA1-237ENST00000523275 SLC26A8Q96RN1 970 aa17.99■□□□□ 0.47
CTNNA1-237ENST00000523275 ALKQ9UM73 1620 aa17.98■□□□□ 0.47
CTNNA1-237ENST00000523275 KCNA6P17658 529 aa17.98■□□□□ 0.47
CTNNA1-237ENST00000523275 BCANQ96GW7 911 aa17.98■□□□□ 0.47
CTNNA1-237ENST00000523275 ADGRB3O60242 1522 aa17.98■□□□□ 0.47
CTNNA1-237ENST00000523275 HDGFP51858 240 aaKnown RBP17.97■□□□□ 0.47
CTNNA1-237ENST00000523275 TET3O43151 1660 aa17.96■□□□□ 0.47
CTNNA1-237ENST00000523275 SOCS7O14512 581 aa17.96■□□□□ 0.47
CTNNA1-237ENST00000523275 UNC13BO14795 1591 aa17.96■□□□□ 0.46
CTNNA1-237ENST00000523275 NUP155O75694 1391 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms