RNA–Protein interactions for RNA: ENST00000523203.5

CSNK1A1-208, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 5

Gene CSNK1A1, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-208ENST00000523203 A2ML1A8K2U0 1454 aa16.24■□□□□ 0.19
CSNK1A1-208ENST00000523203 TCOF1Q13428 1488 aaKnown RBP16.24■□□□□ 0.19
CSNK1A1-208ENST00000523203 WASHC2CQ9Y4E1 1318 aa16.23■□□□□ 0.19
CSNK1A1-208ENST00000523203 DNMT1P26358 1616 aaKnown RBP16.23■□□□□ 0.19
CSNK1A1-208ENST00000523203 FBXO31Q5XUX0 539 aaPredicted RBP16.22■□□□□ 0.19
CSNK1A1-208ENST00000523203 KDM5DQ9BY66 1539 aa16.22■□□□□ 0.19
CSNK1A1-208ENST00000523203 TNRQ92752 1358 aa16.22■□□□□ 0.19
CSNK1A1-208ENST00000523203 ARHGEF5Q12774 1597 aa16.21■□□□□ 0.19
CSNK1A1-208ENST00000523203 FAM135AQ9P2D6 1515 aa16.21■□□□□ 0.19
CSNK1A1-208ENST00000523203 VPS8Q8N3P4 1428 aa16.2■□□□□ 0.18
CSNK1A1-208ENST00000523203 UBAP1LF5GYI3 381 aa16.2■□□□□ 0.18
CSNK1A1-208ENST00000523203 PZPP20742 1482 aa16.2■□□□□ 0.18
CSNK1A1-208ENST00000523203 LRRC9Q6ZRR7 1453 aa16.2■□□□□ 0.18
CSNK1A1-208ENST00000523203 POLR1AO95602 1720 aaPredicted RBP16.17■□□□□ 0.18
CSNK1A1-208ENST00000523203 THEMISQ8N1K5 641 aaPredicted RBP16.16■□□□□ 0.18
CSNK1A1-208ENST00000523203 MIA2Q96PC5 1412 aa16.16■□□□□ 0.18
CSNK1A1-208ENST00000523203 SPATA31D1Q6ZQQ2 1576 aa16.15■□□□□ 0.18
CSNK1A1-208ENST00000523203 ILDR2Q71H61 639 aa16.15■□□□□ 0.18
CSNK1A1-208ENST00000523203 ANKLE2Q86XL3 938 aa16.15■□□□□ 0.18
CSNK1A1-208ENST00000523203 KANK4Q5T7N3 995 aaPredicted RBP16.14■□□□□ 0.17
CSNK1A1-208ENST00000523203 NLRP1Q9C000 1473 aa16.14■□□□□ 0.17
CSNK1A1-208ENST00000523203 MAST1Q9Y2H9 1570 aa16.13■□□□□ 0.17
CSNK1A1-208ENST00000523203 MAP3K1Q13233 1512 aa16.13■□□□□ 0.17
CSNK1A1-208ENST00000523203 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.13■□□□□ 0.17
CSNK1A1-208ENST00000523203 RNF17Q9BXT8 1623 aaKnown RBP16.12■□□□□ 0.17
CSNK1A1-208ENST00000523203 CFAP65Q6ZU64 1925 aaKnown RBP16.12■□□□□ 0.17
CSNK1A1-208ENST00000523203 NEURL4Q96JN8 1562 aa16.12■□□□□ 0.17
CSNK1A1-208ENST00000523203 UGGT1Q9NYU2 1555 aa16.12■□□□□ 0.17
CSNK1A1-208ENST00000523203 MYOM3Q5VTT5 1437 aa16.11■□□□□ 0.17
CSNK1A1-208ENST00000523203 EIF2AK4Q9P2K8 1649 aaKnown RBP16.1■□□□□ 0.17
CSNK1A1-208ENST00000523203 ZC3H13Q5T200 1668 aaKnown RBP16.1■□□□□ 0.17
CSNK1A1-208ENST00000523203 SHANK2Q9UPX8 1470 aa16.1■□□□□ 0.17
CSNK1A1-208ENST00000523203 ABCC3O15438 1527 aa16.09■□□□□ 0.17
CSNK1A1-208ENST00000523203 CPS1P31327 1500 aa16.09■□□□□ 0.17
CSNK1A1-208ENST00000523203 SOCS7O14512 581 aa16.09■□□□□ 0.17
CSNK1A1-208ENST00000523203 APLP2Q06481 763 aa16.08■□□□□ 0.16
CSNK1A1-208ENST00000523203 SCAF1Q9H7N4 1312 aaKnown RBP16.08■□□□□ 0.16
CSNK1A1-208ENST00000523203 DEPDC5O75140 1603 aa16.08■□□□□ 0.16
CSNK1A1-208ENST00000523203 TOM1O60784 492 aa16.07■□□□□ 0.16
CSNK1A1-208ENST00000523203 NPHP4O75161 1426 aaPredicted RBP16.07■□□□□ 0.16
CSNK1A1-208ENST00000523203 CEP152O94986 1710 aa16.06■□□□□ 0.16
CSNK1A1-208ENST00000523203 DUOX2Q9NRD8 1548 aa16.06■□□□□ 0.16
CSNK1A1-208ENST00000523203 MED14O60244 1454 aa16.06■□□□□ 0.16
CSNK1A1-208ENST00000523203 PIP4K2BP78356 416 aa16.06■□□□□ 0.16
CSNK1A1-208ENST00000523203 ERVK-7P63135 1459 aa16.04■□□□□ 0.16
CSNK1A1-208ENST00000523203 IQGAP1P46940 1657 aa16.04■□□□□ 0.16
CSNK1A1-208ENST00000523203 MROH1Q8NDA8 1641 aa16.04■□□□□ 0.16
CSNK1A1-208ENST00000523203 VWDEQ8N2E2 1590 aa16.04■□□□□ 0.16
CSNK1A1-208ENST00000523203 RRP7BPQ9NSQ0 103 aa16.03■□□□□ 0.16
CSNK1A1-208ENST00000523203 KIF15Q9NS87 1388 aa16.02■□□□□ 0.16
CSNK1A1-208ENST00000523203 PTPN23Q9H3S7 1636 aa16.01■□□□□ 0.15
CSNK1A1-208ENST00000523203 HSPA1LP34931 641 aa16.01■□□□□ 0.15
CSNK1A1-208ENST00000523203 CROCC2H7BZ55 1655 aa16.01■□□□□ 0.15
CSNK1A1-208ENST00000523203 ABCC5O15440 1437 aa16.01■□□□□ 0.15
CSNK1A1-208ENST00000523203 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16■□□□□ 0.157e-10■■□□□ 11.4
CSNK1A1-208ENST00000523203 UBR1Q8IWV7 1749 aa15.99■□□□□ 0.15
CSNK1A1-208ENST00000523203 ERBINQ96RT1 1412 aa15.99■□□□□ 0.15
CSNK1A1-208ENST00000523203 PRDM15P57071 1507 aaPredicted RBP15.98■□□□□ 0.15
CSNK1A1-208ENST00000523203 DAPK1P53355 1430 aa15.97■□□□□ 0.15
CSNK1A1-208ENST00000523203 ARHGAP31Q2M1Z3 1444 aa15.97■□□□□ 0.15
CSNK1A1-208ENST00000523203 STRCP1A6NGW2 1772 aa15.97■□□□□ 0.15
CSNK1A1-208ENST00000523203 KANK1Q14678 1352 aa15.97■□□□□ 0.15
CSNK1A1-208ENST00000523203 TXNDC2Q86VQ3 553 aa15.96■□□□□ 0.15
CSNK1A1-208ENST00000523203 SCAF11Q99590 1463 aaKnown RBP15.96■□□□□ 0.14
CSNK1A1-208ENST00000523203 FGD6Q6ZV73 1430 aa15.95■□□□□ 0.14
CSNK1A1-208ENST00000523203 LTKP29376 864 aa15.95■□□□□ 0.14
CSNK1A1-208ENST00000523203 CHIC2Q9UKJ5 165 aa15.95■□□□□ 0.14
CSNK1A1-208ENST00000523203 EID1Q9Y6B2 187 aa15.95■□□□□ 0.14
CSNK1A1-208ENST00000523203 STAG3Q9UJ98 1225 aa15.94■□□□□ 0.14
CSNK1A1-208ENST00000523203 ANKRD30AQ9BXX3 1397 aa15.94■□□□□ 0.14
CSNK1A1-208ENST00000523203 LRRC7Q96NW7 1537 aa15.94■□□□□ 0.14
CSNK1A1-208ENST00000523203 SLIT1O75093 1534 aa15.93■□□□□ 0.14
CSNK1A1-208ENST00000523203 SYNMO15061 1565 aa15.92■□□□□ 0.14
CSNK1A1-208ENST00000523203 ARHGAP23Q9P227 1491 aa15.92■□□□□ 0.14
CSNK1A1-208ENST00000523203 MED1Q15648 1581 aaPredicted RBP15.92■□□□□ 0.14
CSNK1A1-208ENST00000523203 PIK3C2BO00750 1634 aa15.91■□□□□ 0.14
CSNK1A1-208ENST00000523203 ALKQ9UM73 1620 aa15.91■□□□□ 0.14
CSNK1A1-208ENST00000523203 SENP3Q9H4L4 574 aaPredicted RBP15.89■□□□□ 0.13
CSNK1A1-208ENST00000523203 TMEM2Q9UHN6 1383 aa15.88■□□□□ 0.13
CSNK1A1-208ENST00000523203 IDI1Q13907 227 aa15.88■□□□□ 0.13
CSNK1A1-208ENST00000523203 LMTK2Q8IWU2 1503 aa15.88■□□□□ 0.13
CSNK1A1-208ENST00000523203 KDM5AP29375 1690 aaKnown RBP15.87■□□□□ 0.13
CSNK1A1-208ENST00000523203 EFCAB6Q5THR3 1501 aa15.86■□□□□ 0.13
CSNK1A1-208ENST00000523203 FAM50AQ14320 339 aaKnown RBP15.86■□□□□ 0.13
CSNK1A1-208ENST00000523203 PHF23Q9BUL5 403 aaPredicted RBP15.86■□□□□ 0.13
CSNK1A1-208ENST00000523203 XIRP1Q702N8 1843 aaKnown RBP15.84■□□□□ 0.13
CSNK1A1-208ENST00000523203 ADGRL2O95490 1459 aa15.84■□□□□ 0.13
CSNK1A1-208ENST00000523203 SLC52A1Q9NWF4 448 aa15.83■□□□□ 0.12
CSNK1A1-208ENST00000523203 NOS1P29475 1434 aa15.82■□□□□ 0.12
CSNK1A1-208ENST00000523203 KCNA6P17658 529 aa15.81■□□□□ 0.12
CSNK1A1-208ENST00000523203 BCANQ96GW7 911 aa15.81■□□□□ 0.12
CSNK1A1-208ENST00000523203 SLC26A8Q96RN1 970 aa15.81■□□□□ 0.12
CSNK1A1-208ENST00000523203 ANKRD50Q9ULJ7 1429 aa15.81■□□□□ 0.12
CSNK1A1-208ENST00000523203 ADGRB3O60242 1522 aa15.8■□□□□ 0.12
CSNK1A1-208ENST00000523203 PROSER2Q86WR7 435 aaPredicted RBP15.8■□□□□ 0.12
CSNK1A1-208ENST00000523203 PPARGC1BQ86YN6 1023 aaKnown RBP15.8■□□□□ 0.12
CSNK1A1-208ENST00000523203 TET3O43151 1660 aa15.79■□□□□ 0.12
CSNK1A1-208ENST00000523203 RPRD2Q5VT52 1461 aaKnown RBP15.78■□□□□ 0.12
CSNK1A1-208ENST00000523203 TMEM94Q12767 1356 aa15.78■□□□□ 0.12
CSNK1A1-208ENST00000523203 MYO5BQ9ULV0 1848 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms