RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 PPP6R1Q9UPN7 881 aa24.47■■□□□ 1.51
MRPS28-209ENST00000522987 POLR1AO95602 1720 aaPredicted RBP24.47■■□□□ 1.51
MRPS28-209ENST00000522987 A2ML1A8K2U0 1454 aa24.46■■□□□ 1.51
MRPS28-209ENST00000522987 PLA2R1Q13018 1463 aa24.46■■□□□ 1.51
MRPS28-209ENST00000522987 TSPY4P0CV99 314 aa24.45■■□□□ 1.5
MRPS28-209ENST00000522987 TSPY10P0CW01 314 aa24.45■■□□□ 1.5
MRPS28-209ENST00000522987 TCOF1Q13428 1488 aaKnown RBP24.45■■□□□ 1.5
MRPS28-209ENST00000522987 TNRQ92752 1358 aa24.44■■□□□ 1.5
MRPS28-209ENST00000522987 WASHC2CQ9Y4E1 1318 aa24.44■■□□□ 1.5
MRPS28-209ENST00000522987 RSPH4AQ5TD94 716 aa24.43■■□□□ 1.5
MRPS28-209ENST00000522987 PKD2Q13563 968 aa24.42■■□□□ 1.5
MRPS28-209ENST00000522987 PZPP20742 1482 aa24.42■■□□□ 1.5
MRPS28-209ENST00000522987 CEP152O94986 1710 aa24.41■■□□□ 1.5
MRPS28-209ENST00000522987 MAST1Q9Y2H9 1570 aa24.39■■□□□ 1.5
MRPS28-209ENST00000522987 DISP3Q9P2K9 1392 aa24.39■■□□□ 1.49
MRPS28-209ENST00000522987 RNF17Q9BXT8 1623 aaKnown RBP24.38■■□□□ 1.49
MRPS28-209ENST00000522987 MYOM3Q5VTT5 1437 aa24.37■■□□□ 1.49
MRPS28-209ENST00000522987 IQSEC2Q5JU85 1478 aa24.37■■□□□ 1.49
MRPS28-209ENST00000522987 NEURL4Q96JN8 1562 aa24.37■■□□□ 1.49
MRPS28-209ENST00000522987 FAM135AQ9P2D6 1515 aa24.35■■□□□ 1.49
MRPS28-209ENST00000522987 MAP3K1Q13233 1512 aa24.35■■□□□ 1.49
MRPS28-209ENST00000522987 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.34■■□□□ 1.49
MRPS28-209ENST00000522987 UBAP1LF5GYI3 381 aa24.34■■□□□ 1.49
MRPS28-209ENST00000522987 ABCC3O15438 1527 aa24.33■■□□□ 1.49
MRPS28-209ENST00000522987 CROCC2H7BZ55 1655 aa24.33■■□□□ 1.49
MRPS28-209ENST00000522987 ZC3H13Q5T200 1668 aaKnown RBP24.33■■□□□ 1.49
MRPS28-209ENST00000522987 MROH1Q8NDA8 1641 aa24.32■■□□□ 1.48
MRPS28-209ENST00000522987 EIF2AK4Q9P2K8 1649 aaKnown RBP24.32■■□□□ 1.48
MRPS28-209ENST00000522987 MIA2Q96PC5 1412 aa24.32■■□□□ 1.48
MRPS28-209ENST00000522987 SPATA31D1Q6ZQQ2 1576 aa24.31■■□□□ 1.48
MRPS28-209ENST00000522987 UGGT1Q9NYU2 1555 aa24.31■■□□□ 1.48
MRPS28-209ENST00000522987 PTPN23Q9H3S7 1636 aa24.3■■□□□ 1.48
MRPS28-209ENST00000522987 ILDR2Q71H61 639 aa24.29■■□□□ 1.48
MRPS28-209ENST00000522987 NLRP1Q9C000 1473 aa24.26■■□□□ 1.47
MRPS28-209ENST00000522987 APLP2Q06481 763 aa24.26■■□□□ 1.47
MRPS28-209ENST00000522987 DUOX2Q9NRD8 1548 aa24.25■■□□□ 1.47
MRPS28-209ENST00000522987 ANKLE2Q86XL3 938 aa24.25■■□□□ 1.47
MRPS28-209ENST00000522987 THEMISQ8N1K5 641 aaPredicted RBP24.24■■□□□ 1.47
MRPS28-209ENST00000522987 RRP7BPQ9NSQ0 103 aa24.24■■□□□ 1.47
MRPS28-209ENST00000522987 SCAF1Q9H7N4 1312 aaKnown RBP24.24■■□□□ 1.47
MRPS28-209ENST00000522987 ERVK-7P63135 1459 aa24.24■■□□□ 1.47
MRPS28-209ENST00000522987 IQGAP1P46940 1657 aa24.23■■□□□ 1.47
MRPS28-209ENST00000522987 SHANK2Q9UPX8 1470 aa24.22■■□□□ 1.47
MRPS28-209ENST00000522987 ABCC5O15440 1437 aa24.22■■□□□ 1.47
MRPS28-209ENST00000522987 KIF15Q9NS87 1388 aa24.22■■□□□ 1.47
MRPS28-209ENST00000522987 UBR1Q8IWV7 1749 aa24.21■■□□□ 1.47
MRPS28-209ENST00000522987 DEPDC5O75140 1603 aa24.21■■□□□ 1.47
MRPS28-209ENST00000522987 VWDEQ8N2E2 1590 aa24.2■■□□□ 1.47
MRPS28-209ENST00000522987 NPHP4O75161 1426 aaPredicted RBP24.2■■□□□ 1.46
MRPS28-209ENST00000522987 PIP4K2BP78356 416 aa24.2■■□□□ 1.46
MRPS28-209ENST00000522987 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.2■■□□□ 1.46
MRPS28-209ENST00000522987 STRCP1A6NGW2 1772 aa24.2■■□□□ 1.46
MRPS28-209ENST00000522987 CHIC2Q9UKJ5 165 aa24.18■■□□□ 1.46
MRPS28-209ENST00000522987 CPS1P31327 1500 aa24.18■■□□□ 1.46
MRPS28-209ENST00000522987 DAPK1P53355 1430 aa24.18■■□□□ 1.46
MRPS28-209ENST00000522987 FGD6Q6ZV73 1430 aa24.16■■□□□ 1.46
MRPS28-209ENST00000522987 PRDM15P57071 1507 aaPredicted RBP24.15■■□□□ 1.46
MRPS28-209ENST00000522987 MED14O60244 1454 aa24.14■■□□□ 1.46
MRPS28-209ENST00000522987 ERBINQ96RT1 1412 aa24.12■■□□□ 1.45
MRPS28-209ENST00000522987 PIK3C2BO00750 1634 aa24.11■■□□□ 1.45
MRPS28-209ENST00000522987 SENP3Q9H4L4 574 aaPredicted RBP24.11■■□□□ 1.45
MRPS28-209ENST00000522987 HSPA1LP34931 641 aa24.09■■□□□ 1.45
MRPS28-209ENST00000522987 TOM1O60784 492 aa24.07■■□□□ 1.44
MRPS28-209ENST00000522987 ALKQ9UM73 1620 aa24.06■■□□□ 1.44
MRPS28-209ENST00000522987 FAM50AQ14320 339 aaKnown RBP24.05■■□□□ 1.44
MRPS28-209ENST00000522987 SCAF11Q99590 1463 aaKnown RBP24.05■■□□□ 1.44
MRPS28-209ENST00000522987 KANK1Q14678 1352 aa24.04■■□□□ 1.44
MRPS28-209ENST00000522987 ANKRD30AQ9BXX3 1397 aa24.04■■□□□ 1.44
MRPS28-209ENST00000522987 LTKP29376 864 aa24.04■■□□□ 1.44
MRPS28-209ENST00000522987 ARHGAP31Q2M1Z3 1444 aa24.03■■□□□ 1.44
MRPS28-209ENST00000522987 TXNDC2Q86VQ3 553 aa24.03■■□□□ 1.44
MRPS28-209ENST00000522987 LRRC7Q96NW7 1537 aa24.03■■□□□ 1.44
MRPS28-209ENST00000522987 SOCS7O14512 581 aa24.02■■□□□ 1.44
MRPS28-209ENST00000522987 XIRP1Q702N8 1843 aaKnown RBP24.01■■□□□ 1.43
MRPS28-209ENST00000522987 SYNMO15061 1565 aa24.01■■□□□ 1.43
MRPS28-209ENST00000522987 STAG3Q9UJ98 1225 aa24■■□□□ 1.43
MRPS28-209ENST00000522987 ARHGAP23Q9P227 1491 aa24■■□□□ 1.43
MRPS28-209ENST00000522987 SLIT1O75093 1534 aa24■■□□□ 1.43
MRPS28-209ENST00000522987 MED1Q15648 1581 aaPredicted RBP23.99■■□□□ 1.43
MRPS28-209ENST00000522987 MYO5BQ9ULV0 1848 aa23.98■■□□□ 1.43
MRPS28-209ENST00000522987 EFCAB6Q5THR3 1501 aa23.95■■□□□ 1.43
MRPS28-209ENST00000522987 LMTK2Q8IWU2 1503 aa23.95■■□□□ 1.43
MRPS28-209ENST00000522987 EID1Q9Y6B2 187 aa23.95■■□□□ 1.42
MRPS28-209ENST00000522987 IDI1Q13907 227 aa23.94■■□□□ 1.42
MRPS28-209ENST00000522987 ADGRL2O95490 1459 aa23.94■■□□□ 1.42
MRPS28-209ENST00000522987 TMEM2Q9UHN6 1383 aa23.92■■□□□ 1.42
MRPS28-209ENST00000522987 KDM5AP29375 1690 aaKnown RBP23.91■■□□□ 1.42
MRPS28-209ENST00000522987 GCC2Q8IWJ2 1684 aa23.89■■□□□ 1.42
MRPS28-209ENST00000522987 ADGRB3O60242 1522 aa23.89■■□□□ 1.41
MRPS28-209ENST00000522987 ANKRD50Q9ULJ7 1429 aa23.88■■□□□ 1.41
MRPS28-209ENST00000522987 PPARGC1BQ86YN6 1023 aaKnown RBP23.88■■□□□ 1.41
MRPS28-209ENST00000522987 SLC26A8Q96RN1 970 aa23.88■■□□□ 1.41
MRPS28-209ENST00000522987 NOS1P29475 1434 aa23.87■■□□□ 1.41
MRPS28-209ENST00000522987 TET3O43151 1660 aa23.86■■□□□ 1.41
MRPS28-209ENST00000522987 RBM33Q96EV2 1170 aaKnown RBP23.86■■□□□ 1.41
MRPS28-209ENST00000522987 BCANQ96GW7 911 aa23.85■■□□□ 1.41
MRPS28-209ENST00000522987 ITGAEP38570 1179 aa23.82■■□□□ 1.4
MRPS28-209ENST00000522987 E9PCH4 1651 aa23.81■■□□□ 1.4
MRPS28-209ENST00000522987 UNC13BO14795 1591 aa23.81■■□□□ 1.4
MRPS28-209ENST00000522987 PHF23Q9BUL5 403 aaPredicted RBP23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms