RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 MAP3K1Q13233 1512 aa15.97■□□□□ 0.15
CTNNA1-235ENST00000522730 RRP7BPQ9NSQ0 103 aa15.96■□□□□ 0.15
CTNNA1-235ENST00000522730 CAMSAP1Q5T5Y3 1602 aa15.96■□□□□ 0.15
CTNNA1-235ENST00000522730 PTPRTO14522 1441 aa15.95■□□□□ 0.14
CTNNA1-235ENST00000522730 NCOA1Q15788 1441 aa15.95■□□□□ 0.14
CTNNA1-235ENST00000522730 ARHGEF5Q12774 1597 aa15.95■□□□□ 0.14
CTNNA1-235ENST00000522730 MIA2Q96PC5 1412 aa15.94■□□□□ 0.14
CTNNA1-235ENST00000522730 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.94■□□□□ 0.141e-11■□□□□ 8.9
CTNNA1-235ENST00000522730 CHIC2Q9UKJ5 165 aa15.94■□□□□ 0.14
CTNNA1-235ENST00000522730 TNRQ92752 1358 aa15.93■□□□□ 0.14
CTNNA1-235ENST00000522730 PKD2Q13563 968 aa15.93■□□□□ 0.14
CTNNA1-235ENST00000522730 FAM50AQ14320 339 aaKnown RBP15.9■□□□□ 0.14
CTNNA1-235ENST00000522730 ZNF335Q9H4Z2 1342 aaPredicted RBP15.9■□□□□ 0.14
CTNNA1-235ENST00000522730 CEP170BQ9Y4F5 1589 aaPredicted RBP15.89■□□□□ 0.13
CTNNA1-235ENST00000522730 MYO3AQ8NEV4 1616 aa15.89■□□□□ 0.13
CTNNA1-235ENST00000522730 KDM5DQ9BY66 1539 aa15.89■□□□□ 0.13
CTNNA1-235ENST00000522730 THEMISQ8N1K5 641 aaPredicted RBP15.88■□□□□ 0.13
CTNNA1-235ENST00000522730 ABCC5O15440 1437 aa15.87■□□□□ 0.13
CTNNA1-235ENST00000522730 A2ML1A8K2U0 1454 aa15.87■□□□□ 0.13
CTNNA1-235ENST00000522730 KIF15Q9NS87 1388 aa15.87■□□□□ 0.13
CTNNA1-235ENST00000522730 PZPP20742 1482 aa15.86■□□□□ 0.13
CTNNA1-235ENST00000522730 ANKLE2Q86XL3 938 aa15.86■□□□□ 0.13
CTNNA1-235ENST00000522730 PPARGC1BQ86YN6 1023 aaKnown RBP15.86■□□□□ 0.13
CTNNA1-235ENST00000522730 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.86■□□□□ 0.13
CTNNA1-235ENST00000522730 MAST1Q9Y2H9 1570 aa15.85■□□□□ 0.13
CTNNA1-235ENST00000522730 PTPN23Q9H3S7 1636 aa15.85■□□□□ 0.13
CTNNA1-235ENST00000522730 FGD6Q6ZV73 1430 aa15.85■□□□□ 0.13
CTNNA1-235ENST00000522730 UBAP1LF5GYI3 381 aa15.83■□□□□ 0.12
CTNNA1-235ENST00000522730 DAPK1P53355 1430 aa15.83■□□□□ 0.12
CTNNA1-235ENST00000522730 PLA2R1Q13018 1463 aa15.83■□□□□ 0.12
CTNNA1-235ENST00000522730 DNMT1P26358 1616 aaKnown RBP15.83■□□□□ 0.12
CTNNA1-235ENST00000522730 TCOF1Q13428 1488 aaKnown RBP15.82■□□□□ 0.12
CTNNA1-235ENST00000522730 DUOX2Q9NRD8 1548 aa15.82■□□□□ 0.12
CTNNA1-235ENST00000522730 LTBP4Q8N2S1 1624 aa15.82■□□□□ 0.12
CTNNA1-235ENST00000522730 ABCC3O15438 1527 aa15.81■□□□□ 0.12
CTNNA1-235ENST00000522730 ZNF142P52746 1687 aaPredicted RBP15.81■□□□□ 0.12
CTNNA1-235ENST00000522730 ANKRD30AQ9BXX3 1397 aa15.8■□□□□ 0.12
CTNNA1-235ENST00000522730 CFAP65Q6ZU64 1925 aaKnown RBP15.8■□□□□ 0.12
CTNNA1-235ENST00000522730 FAM135AQ9P2D6 1515 aa15.79■□□□□ 0.12
CTNNA1-235ENST00000522730 KANK1Q14678 1352 aa15.79■□□□□ 0.12
CTNNA1-235ENST00000522730 NLRP1Q9C000 1473 aa15.78■□□□□ 0.12
CTNNA1-235ENST00000522730 STAG3Q9UJ98 1225 aa15.78■□□□□ 0.12
CTNNA1-235ENST00000522730 RNF17Q9BXT8 1623 aaKnown RBP15.78■□□□□ 0.12
CTNNA1-235ENST00000522730 UGGT1Q9NYU2 1555 aa15.78■□□□□ 0.12
CTNNA1-235ENST00000522730 SCAF1Q9H7N4 1312 aaKnown RBP15.77■□□□□ 0.12
CTNNA1-235ENST00000522730 ITGAEP38570 1179 aa15.77■□□□□ 0.12
CTNNA1-235ENST00000522730 SHANK2Q9UPX8 1470 aa15.77■□□□□ 0.11
CTNNA1-235ENST00000522730 EIF2AK4Q9P2K8 1649 aaKnown RBP15.76■□□□□ 0.11
CTNNA1-235ENST00000522730 ERBINQ96RT1 1412 aa15.76■□□□□ 0.11
CTNNA1-235ENST00000522730 ERVK-7P63135 1459 aa15.75■□□□□ 0.11
CTNNA1-235ENST00000522730 CEP152O94986 1710 aa15.74■□□□□ 0.11
CTNNA1-235ENST00000522730 PIP4K2BP78356 416 aa15.74■□□□□ 0.11
CTNNA1-235ENST00000522730 TXNDC2Q86VQ3 553 aa15.74■□□□□ 0.11
CTNNA1-235ENST00000522730 MROH1Q8NDA8 1641 aa15.74■□□□□ 0.11
CTNNA1-235ENST00000522730 NPHP4O75161 1426 aaPredicted RBP15.74■□□□□ 0.11
CTNNA1-235ENST00000522730 CROCC2H7BZ55 1655 aa15.73■□□□□ 0.11
CTNNA1-235ENST00000522730 ZC3H13Q5T200 1668 aaKnown RBP15.72■□□□□ 0.11
CTNNA1-235ENST00000522730 SPATA31D1Q6ZQQ2 1576 aa15.71■□□□□ 0.11
CTNNA1-235ENST00000522730 LTKP29376 864 aa15.71■□□□□ 0.11
CTNNA1-235ENST00000522730 EID1Q9Y6B2 187 aa15.71■□□□□ 0.11
CTNNA1-235ENST00000522730 DISP3Q9P2K9 1392 aa15.71■□□□□ 0.11
CTNNA1-235ENST00000522730 IQSEC2Q5JU85 1478 aa15.71■□□□□ 0.1
CTNNA1-235ENST00000522730 IDI1Q13907 227 aa15.7■□□□□ 0.1
CTNNA1-235ENST00000522730 NEURL4Q96JN8 1562 aa15.7■□□□□ 0.1
CTNNA1-235ENST00000522730 TOM1O60784 492 aa15.69■□□□□ 0.1
CTNNA1-235ENST00000522730 ARHGAP31Q2M1Z3 1444 aa15.68■□□□□ 0.1
CTNNA1-235ENST00000522730 POLR1AO95602 1720 aaPredicted RBP15.68■□□□□ 0.1
CTNNA1-235ENST00000522730 BCANQ96GW7 911 aa15.68■□□□□ 0.1
CTNNA1-235ENST00000522730 PRDM15P57071 1507 aaPredicted RBP15.68■□□□□ 0.1
CTNNA1-235ENST00000522730 ANKRD50Q9ULJ7 1429 aa15.67■□□□□ 0.1
CTNNA1-235ENST00000522730 MED14O60244 1454 aa15.65■□□□□ 0.1
CTNNA1-235ENST00000522730 CHGAP10645 457 aaKnown RBP15.65■□□□□ 0.1
CTNNA1-235ENST00000522730 ADGRL2O95490 1459 aa15.64■□□□□ 0.09
CTNNA1-235ENST00000522730 SCAF11Q99590 1463 aaKnown RBP15.64■□□□□ 0.09
CTNNA1-235ENST00000522730 CPS1P31327 1500 aa15.63■□□□□ 0.09
CTNNA1-235ENST00000522730 HSPA1LP34931 641 aa15.63■□□□□ 0.09
CTNNA1-235ENST00000522730 DEPDC5O75140 1603 aa15.63■□□□□ 0.09
CTNNA1-235ENST00000522730 SLC26A8Q96RN1 970 aa15.62■□□□□ 0.09
CTNNA1-235ENST00000522730 UBR1Q8IWV7 1749 aa15.62■□□□□ 0.09
CTNNA1-235ENST00000522730 VWDEQ8N2E2 1590 aa15.62■□□□□ 0.09
CTNNA1-235ENST00000522730 TMEM2Q9UHN6 1383 aa15.62■□□□□ 0.09
CTNNA1-235ENST00000522730 IQGAP1P46940 1657 aa15.61■□□□□ 0.09
CTNNA1-235ENST00000522730 SLC52A1Q9NWF4 448 aa15.61■□□□□ 0.09
CTNNA1-235ENST00000522730 ILDR2Q71H61 639 aa15.6■□□□□ 0.09
CTNNA1-235ENST00000522730 PIK3C2BO00750 1634 aa15.6■□□□□ 0.09
CTNNA1-235ENST00000522730 LMTK2Q8IWU2 1503 aa15.59■□□□□ 0.09
CTNNA1-235ENST00000522730 PPP1R15AO75807 674 aaPredicted RBP15.58■□□□□ 0.08
CTNNA1-235ENST00000522730 NUTM2DQ5VT03 806 aaPredicted RBP15.58■□□□□ 0.08
CTNNA1-235ENST00000522730 RBM33Q96EV2 1170 aaKnown RBP15.58■□□□□ 0.08
CTNNA1-235ENST00000522730 ARHGAP23Q9P227 1491 aa15.58■□□□□ 0.08
CTNNA1-235ENST00000522730 NUP155O75694 1391 aa15.57■□□□□ 0.08
CTNNA1-235ENST00000522730 NOS1P29475 1434 aa15.57■□□□□ 0.08
CTNNA1-235ENST00000522730 SLIT1O75093 1534 aa15.57■□□□□ 0.08
CTNNA1-235ENST00000522730 EFCAB6Q5THR3 1501 aa15.57■□□□□ 0.08
CTNNA1-235ENST00000522730 PROSER2Q86WR7 435 aaPredicted RBP15.56■□□□□ 0.08
CTNNA1-235ENST00000522730 ROCK1Q13464 1354 aa15.56■□□□□ 0.08
CTNNA1-235ENST00000522730 LRRC7Q96NW7 1537 aa15.56■□□□□ 0.08
CTNNA1-235ENST00000522730 SYNMO15061 1565 aa15.55■□□□□ 0.08
CTNNA1-235ENST00000522730 HDGFP51858 240 aaKnown RBP15.55■□□□□ 0.08
CTNNA1-235ENST00000522730 KCNA6P17658 529 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms