RNA–Protein interactions for RNA: ENST00000522230.1

CKS1BP7-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 7, humanhuman

BASIC

Gene CKS1BP7, Length 235 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP7-201ENST00000522230 FOSBP53539 338 aa5.42□□□□□ -1.54
CKS1BP7-201ENST00000522230 DOK7Q18PE1 504 aa5.42□□□□□ -1.54
CKS1BP7-201ENST00000522230 GPR153Q6NV75 609 aa5.42□□□□□ -1.54
CKS1BP7-201ENST00000522230 NLRP7Q8WX94 980 aa5.42□□□□□ -1.54
CKS1BP7-201ENST00000522230 JPH4Q96JJ6 628 aa5.42□□□□□ -1.54
CKS1BP7-201ENST00000522230 SCUBE2Q9NQ36 999 aa5.42□□□□□ -1.54
CKS1BP7-201ENST00000522230 PARP9Q8IXQ6 854 aa5.41□□□□□ -1.54
CKS1BP7-201ENST00000522230 ADAM33Q9BZ11 813 aa5.41□□□□□ -1.54
CKS1BP7-201ENST00000522230 FAM117AQ9C073 453 aa5.41□□□□□ -1.54
CKS1BP7-201ENST00000522230 LHX6Q9UPM6 363 aa5.41□□□□□ -1.54
CKS1BP7-201ENST00000522230 C6orf132Q5T0Z8 1188 aa5.4□□□□□ -1.54
CKS1BP7-201ENST00000522230 ZNF710Q8N1W2 664 aa5.4□□□□□ -1.54
CKS1BP7-201ENST00000522230 REPIN1Q9BWE0 567 aaKnown RBP5.4□□□□□ -1.54
CKS1BP7-201ENST00000522230 PADI6Q6TGC4 694 aa5.39□□□□□ -1.55
CKS1BP7-201ENST00000522230 ZDHHC16Q969W1 377 aa5.39□□□□□ -1.55
CKS1BP7-201ENST00000522230 PHOX2BQ99453 314 aa5.39□□□□□ -1.55
CKS1BP7-201ENST00000522230 TTLL12Q14166 644 aaPredicted RBP5.38□□□□□ -1.55
CKS1BP7-201ENST00000522230 AMHR2Q16671 573 aa5.38□□□□□ -1.55
CKS1BP7-201ENST00000522230 FBXW7Q969H0 707 aa5.38□□□□□ -1.55
CKS1BP7-201ENST00000522230 OTUD5Q96G74 571 aa5.38□□□□□ -1.55
CKS1BP7-201ENST00000522230 PLEKHG3A1L390 1219 aa5.37□□□□□ -1.55
CKS1BP7-201ENST00000522230 RIMBP2O15034 1052 aa5.37□□□□□ -1.55
CKS1BP7-201ENST00000522230 COL9A1P20849 921 aa5.37□□□□□ -1.55
CKS1BP7-201ENST00000522230 MAMSTRQ6ZN01 415 aa5.37□□□□□ -1.55
CKS1BP7-201ENST00000522230 C3orf80F5H4A9 247 aa5.36□□□□□ -1.55
CKS1BP7-201ENST00000522230 MS4A1P11836 297 aa5.36□□□□□ -1.55
CKS1BP7-201ENST00000522230 MDM2Q00987 491 aaPredicted RBP5.36□□□□□ -1.55
CKS1BP7-201ENST00000522230 GIGYF2Q6Y7W6 1299 aaKnown RBP5.36□□□□□ -1.55
CKS1BP7-201ENST00000522230 FAM198AQ9UFP1 575 aa5.36□□□□□ -1.55
CKS1BP7-201ENST00000522230 ZSWIM6Q9HCJ5 1215 aa5.35□□□□□ -1.55
CKS1BP7-201ENST00000522230 CDCA7LQ96GN5 454 aa5.34□□□□□ -1.55
CKS1BP7-201ENST00000522230 ADGRG1Q9Y653 693 aa5.34□□□□□ -1.55
CKS1BP7-201ENST00000522230 HOXB1P14653 301 aaPredicted RBP5.33□□□□□ -1.56
CKS1BP7-201ENST00000522230 PRSS12P56730 875 aa5.33□□□□□ -1.56
CKS1BP7-201ENST00000522230 PPP4R3BQ5MIZ7 849 aa5.33□□□□□ -1.56
CKS1BP7-201ENST00000522230 C14orf37Q86TY3 774 aa5.33□□□□□ -1.56
CKS1BP7-201ENST00000522230 METTL3Q86U44 580 aaKnown RBP5.33□□□□□ -1.56
CKS1BP7-201ENST00000522230 TTC13Q8NBP0 860 aa5.33□□□□□ -1.56
CKS1BP7-201ENST00000522230 TMUB1Q9BVT8 246 aa5.33□□□□□ -1.56
CKS1BP7-201ENST00000522230 PXYLP1Q8TE99 480 aa5.32□□□□□ -1.56
CKS1BP7-201ENST00000522230 BCL2L12Q9HB09 334 aa5.32□□□□□ -1.56
CKS1BP7-201ENST00000522230 TSKSQ9UJT2 592 aa5.32□□□□□ -1.56
CKS1BP7-201ENST00000522230 SMAPO00193 183 aa5.31□□□□□ -1.56
CKS1BP7-201ENST00000522230 PROX2Q3B8N5 592 aa5.31□□□□□ -1.56
CKS1BP7-201ENST00000522230 LHX8Q68G74 356 aa5.31□□□□□ -1.56
CKS1BP7-201ENST00000522230 KCNK17Q96T54 332 aa5.31□□□□□ -1.56
CKS1BP7-201ENST00000522230 SNPHO15079 494 aa5.3□□□□□ -1.56
CKS1BP7-201ENST00000522230 PTPREP23469 700 aa5.3□□□□□ -1.56
CKS1BP7-201ENST00000522230 SSTR3P32745 418 aaPredicted RBP5.3□□□□□ -1.56
CKS1BP7-201ENST00000522230 CLCN1P35523 988 aa5.3□□□□□ -1.56
CKS1BP7-201ENST00000522230 PSEN2P49810 448 aa5.3□□□□□ -1.56
CKS1BP7-201ENST00000522230 CERKQ8TCT0 537 aa5.3□□□□□ -1.56
CKS1BP7-201ENST00000522230 DDRGK1Q96HY6 314 aa5.3□□□□□ -1.56
CKS1BP7-201ENST00000522230 GPCPD1Q9NPB8 672 aa5.3□□□□□ -1.56
CKS1BP7-201ENST00000522230 PPP1R3GB7ZBB8 358 aa5.29□□□□□ -1.56
CKS1BP7-201ENST00000522230 OATP04181 439 aa5.29□□□□□ -1.56
CKS1BP7-201ENST00000522230 POTEEQ6S8J3 1075 aa5.29□□□□□ -1.56
CKS1BP7-201ENST00000522230 NUDT18Q6ZVK8 323 aa5.29□□□□□ -1.56
CKS1BP7-201ENST00000522230 MARVELD3Q96A59 401 aa5.29□□□□□ -1.56
CKS1BP7-201ENST00000522230 FAM217BQ9NTX9 383 aaPredicted RBP5.29□□□□□ -1.56
CKS1BP7-201ENST00000522230 AXIN2Q9Y2T1 843 aa5.29□□□□□ -1.56
CKS1BP7-201ENST00000522230 RCCD1A6NED2 376 aa5.28□□□□□ -1.56
CKS1BP7-201ENST00000522230 VARS2Q5ST30 1063 aaKnown RBP5.28□□□□□ -1.56
CKS1BP7-201ENST00000522230 BEGAINQ9BUH8 593 aa5.28□□□□□ -1.56
CKS1BP7-201ENST00000522230 RBM27Q9P2N5 1060 aaKnown RBP5.28□□□□□ -1.56
CKS1BP7-201ENST00000522230 PNMA3Q9UL41 463 aa5.28□□□□□ -1.56
CKS1BP7-201ENST00000522230 ERBB3P21860 1342 aa5.27□□□□□ -1.57
CKS1BP7-201ENST00000522230 PSDA5PKW4 1024 aaPredicted RBP5.27□□□□□ -1.57
CKS1BP7-201ENST00000522230 TRIM6-TRIM34B2RNG4 842 aa5.27□□□□□ -1.57
CKS1BP7-201ENST00000522230 ST18O60284 1047 aa5.27□□□□□ -1.57
CKS1BP7-201ENST00000522230 DMRTA1Q5VZB9 504 aa5.27□□□□□ -1.57
CKS1BP7-201ENST00000522230 RBM46Q8TBY0 533 aaKnown RBP5.27□□□□□ -1.57
CKS1BP7-201ENST00000522230 EYA1Q99502 592 aa5.27□□□□□ -1.57
CKS1BP7-201ENST00000522230 TATDN2Q93075 761 aa5.26□□□□□ -1.57
CKS1BP7-201ENST00000522230 SUPT5HO00267 1087 aaKnown RBP5.25□□□□□ -1.57
CKS1BP7-201ENST00000522230 PROCA1Q8NCQ7 364 aaPredicted RBP5.25□□□□□ -1.57
CKS1BP7-201ENST00000522230 POLR3EQ9NVU0 708 aa5.25□□□□□ -1.57
CKS1BP7-201ENST00000522230 KIAA1468Q9P260 1216 aa5.25□□□□□ -1.57
CKS1BP7-201ENST00000522230 SEPT9Q9UHD8 586 aaPredicted RBP5.25□□□□□ -1.57
CKS1BP7-201ENST00000522230 POTEB3A0JP26 581 aa5.24□□□□□ -1.57
CKS1BP7-201ENST00000522230 FAM205CA6NFA0 338 aa5.24□□□□□ -1.57
CKS1BP7-201ENST00000522230 DDX11L8A8MPP1 907 aa5.24□□□□□ -1.57
CKS1BP7-201ENST00000522230 NBPF26B4DH59 902 aa5.24□□□□□ -1.57
CKS1BP7-201ENST00000522230 EMP3P54852 163 aa5.24□□□□□ -1.57
CKS1BP7-201ENST00000522230 FBXO31Q5XUX0 539 aaPredicted RBP5.24□□□□□ -1.57
CKS1BP7-201ENST00000522230 POTEBQ6S5H4 581 aa5.24□□□□□ -1.57
CKS1BP7-201ENST00000522230 FAM163AQ96GL9 167 aaPredicted RBP5.24□□□□□ -1.57
CKS1BP7-201ENST00000522230 ZBED2Q9BTP6 218 aa5.24□□□□□ -1.57
CKS1BP7-201ENST00000522230 ATP1B4Q9UN42 357 aaPredicted RBP5.24□□□□□ -1.57
CKS1BP7-201ENST00000522230 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.23□□□□□ -1.57
CKS1BP7-201ENST00000522230 SH3D19Q5HYK7 790 aa5.23□□□□□ -1.57
CKS1BP7-201ENST00000522230 MYSM1Q5VVJ2 828 aa5.23□□□□□ -1.57
CKS1BP7-201ENST00000522230 PACS2Q86VP3 889 aa5.23□□□□□ -1.57
CKS1BP7-201ENST00000522230 PCMTD1Q96MG8 357 aaPredicted RBP5.23□□□□□ -1.57
CKS1BP7-201ENST00000522230 DAXXQ9UER7 740 aaPredicted RBP5.23□□□□□ -1.57
CKS1BP7-201ENST00000522230 DNAJB2P25686 324 aa5.22□□□□□ -1.57
CKS1BP7-201ENST00000522230 TBC1D2Q9BYX2 928 aa5.22□□□□□ -1.57
CKS1BP7-201ENST00000522230 TMEM134Q9H6X4 195 aa5.22□□□□□ -1.57
CKS1BP7-201ENST00000522230 ARHGAP33O14559 1287 aa5.21□□□□□ -1.58
CKS1BP7-201ENST00000522230 CD46P15529 392 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms