RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 ZNF326Q5BKZ1 582 aaKnown RBP36.29■■■■□ 3.4
COL13A1-214ENST00000522165 CFAP74Q9C0B2 1584 aa36.29■■■■□ 3.4
COL13A1-214ENST00000522165 DEPDC5O75140 1603 aa36.28■■■■□ 3.4
COL13A1-214ENST00000522165 ANP32CO43423 234 aa36.27■■■■□ 3.4
COL13A1-214ENST00000522165 RALGAPBQ86X10 1494 aa36.27■■■■□ 3.4
COL13A1-214ENST00000522165 ZNF518AQ6AHZ1 1483 aa36.23■■■■□ 3.39
COL13A1-214ENST00000522165 CCDC7Q96M83 1385 aa36.23■■■■□ 3.39
COL13A1-214ENST00000522165 C11orf95C9JLR9 678 aaPredicted RBP36.22■■■■□ 3.39
COL13A1-214ENST00000522165 DCAF11Q8TEB1 546 aa36.22■■■■□ 3.39
COL13A1-214ENST00000522165 DHX29Q7Z478 1369 aaKnown RBP36.21■■■■□ 3.39
COL13A1-214ENST00000522165 KIDINS220Q9ULH0 1771 aa36.2■■■■□ 3.39
COL13A1-214ENST00000522165 EIF2AK4Q9P2K8 1649 aaKnown RBP36.2■■■■□ 3.39
COL13A1-214ENST00000522165 MYT1LQ9UL68 1186 aa36.19■■■■□ 3.38
COL13A1-214ENST00000522165 KDM2AQ9Y2K7 1162 aa36.19■■■■□ 3.38
COL13A1-214ENST00000522165 USP47Q96K76 1375 aa36.19■■■■□ 3.38
COL13A1-214ENST00000522165 CCER2I3L3R5 266 aa36.19■■■■□ 3.38
COL13A1-214ENST00000522165 POLR1AO95602 1720 aaPredicted RBP36.18■■■■□ 3.38
COL13A1-214ENST00000522165 KDM5CP41229 1560 aa36.17■■■■□ 3.38
COL13A1-214ENST00000522165 E9PCH4 1651 aa36.16■■■■□ 3.38
COL13A1-214ENST00000522165 VWDEQ8N2E2 1590 aa36.16■■■■□ 3.38
COL13A1-214ENST00000522165 POGZQ7Z3K3 1410 aa36.15■■■■□ 3.38
COL13A1-214ENST00000522165 CNTLNQ9NXG0 1405 aa36.13■■■■□ 3.37
COL13A1-214ENST00000522165 TET3O43151 1660 aa36.11■■■■□ 3.37
COL13A1-214ENST00000522165 A2MP01023 1474 aa36.11■■■■□ 3.37
COL13A1-214ENST00000522165 KANK1Q14678 1352 aa36.11■■■■□ 3.37
COL13A1-214ENST00000522165 KIF3BO15066 747 aa36.11■■■■□ 3.37
COL13A1-214ENST00000522165 RIMBP3CA6NJZ7 1639 aa36.11■■■■□ 3.37
COL13A1-214ENST00000522165 RIMBP3BA6NNM3 1639 aa36.11■■■■□ 3.37
COL13A1-214ENST00000522165 RIMBP3Q9UFD9 1639 aa36.11■■■■□ 3.37
COL13A1-214ENST00000522165 KIF7Q2M1P5 1343 aa36.1■■■■□ 3.37
COL13A1-214ENST00000522165 PRDM15P57071 1507 aaPredicted RBP36.1■■■■□ 3.37
COL13A1-214ENST00000522165 CYB5RLQ6IPT4 315 aa36.1■■■■□ 3.37
COL13A1-214ENST00000522165 GTF3C3Q9Y5Q9 886 aa36.1■■■■□ 3.37
COL13A1-214ENST00000522165 PRAG1Q86YV5 1406 aa36.09■■■■□ 3.37
COL13A1-214ENST00000522165 NEO1Q92859 1461 aa36.09■■■■□ 3.37
COL13A1-214ENST00000522165 MROH1Q8NDA8 1641 aa36.08■■■■□ 3.37
COL13A1-214ENST00000522165 RGL3Q3MIN7 710 aa36.08■■■■□ 3.37
COL13A1-214ENST00000522165 CARD11Q9BXL7 1154 aa36.07■■■■□ 3.37
COL13A1-214ENST00000522165 MLH3Q9UHC1 1453 aa36.06■■■■□ 3.36
COL13A1-214ENST00000522165 PTPRTO14522 1441 aa36.05■■■■□ 3.36
COL13A1-214ENST00000522165 TRPM2O94759 1503 aa36.05■■■■□ 3.36
COL13A1-214ENST00000522165 BCORL1Q5H9F3 1711 aa36.04■■■■□ 3.36
COL13A1-214ENST00000522165 TRPM1Q7Z4N2 1603 aa36.03■■■■□ 3.36
COL13A1-214ENST00000522165 SPHKAPQ2M3C7 1700 aa36.02■■■■□ 3.36
COL13A1-214ENST00000522165 HECW2Q9P2P5 1572 aa36.02■■■■□ 3.36
COL13A1-214ENST00000522165 MAP3K4Q9Y6R4 1608 aa36■■■■□ 3.35
COL13A1-214ENST00000522165 ROCK2O75116 1388 aaKnown RBP36■■■■□ 3.35
COL13A1-214ENST00000522165 GLI2P10070 1586 aa35.96■■■■□ 3.35
COL13A1-214ENST00000522165 RNF17Q9BXT8 1623 aaKnown RBP35.96■■■■□ 3.35
COL13A1-214ENST00000522165 ARID4BQ4LE39 1312 aaPredicted RBP35.96■■■■□ 3.35
COL13A1-214ENST00000522165 FRMPD1Q5SYB0 1578 aa35.94■■■■□ 3.34
COL13A1-214ENST00000522165 CEP152O94986 1710 aa35.93■■■■□ 3.34
COL13A1-214ENST00000522165 GPRASP1Q5JY77 1395 aa35.92■■■■□ 3.34
COL13A1-214ENST00000522165 CLTCL1P53675 1640 aa35.92■■■■□ 3.34
COL13A1-214ENST00000522165 LMTK2Q8IWU2 1503 aa35.9■■■■□ 3.34
COL13A1-214ENST00000522165 ABCA6Q8N139 1617 aa35.9■■■■□ 3.34
COL13A1-214ENST00000522165 EFCAB6Q5THR3 1501 aa35.89■■■■□ 3.34
COL13A1-214ENST00000522165 LAMC1P11047 1609 aa35.88■■■■□ 3.33
COL13A1-214ENST00000522165 ST20-MTHFSA0A0A6YYL1 179 aa35.88■■■■□ 3.33
COL13A1-214ENST00000522165 RAPGEF3O95398 923 aa35.87■■■■□ 3.33
COL13A1-214ENST00000522165 NBPF1Q3BBV0 1214 aa35.85■■■■□ 3.33
COL13A1-214ENST00000522165 PPRC1Q5VV67 1664 aaKnown RBP35.84■■■■□ 3.33
COL13A1-214ENST00000522165 RICTORQ6R327 1708 aa35.83■■■■□ 3.33
COL13A1-214ENST00000522165 PRKRIP1Q9H875 184 aaPredicted RBP35.8■■■■□ 3.32
COL13A1-214ENST00000522165 NEURL4Q96JN8 1562 aa35.8■■■■□ 3.32
COL13A1-214ENST00000522165 DIP2BQ9P265 1576 aa35.78■■■■□ 3.32
COL13A1-214ENST00000522165 STAC3Q96MF2 364 aa35.78■■■■□ 3.32
COL13A1-214ENST00000522165 DIP2CQ9Y2E4 1556 aa35.78■■■■□ 3.32
COL13A1-214ENST00000522165 MADDQ8WXG6 1647 aa35.78■■■■□ 3.32
COL13A1-214ENST00000522165 POLR3GLQ9BT43 218 aa35.75■■■■□ 3.31
COL13A1-214ENST00000522165 FAM69CQ0P6D2 419 aa35.74■■■■□ 3.31
COL13A1-214ENST00000522165 GGT6Q6P531 493 aa35.72■■■■□ 3.31
COL13A1-214ENST00000522165 UGGT1Q9NYU2 1555 aa35.71■■■■□ 3.31
COL13A1-214ENST00000522165 ABCC3O15438 1527 aa35.67■■■■□ 3.3
COL13A1-214ENST00000522165 KIF1BO60333 1816 aa35.66■■■■□ 3.3
COL13A1-214ENST00000522165 NPATQ14207 1427 aa35.66■■■■□ 3.3
COL13A1-214ENST00000522165 YEATS2Q9ULM3 1422 aa35.64■■■■□ 3.3
COL13A1-214ENST00000522165 WASHC2CQ9Y4E1 1318 aa35.62■■■■□ 3.29
COL13A1-214ENST00000522165 ZMYM4Q5VZL5 1548 aa35.61■■■■□ 3.29
COL13A1-214ENST00000522165 TESK2Q96S53 571 aa35.6■■■■□ 3.29
COL13A1-214ENST00000522165 CCDC184Q52MB2 194 aa35.6■■■■□ 3.29
COL13A1-214ENST00000522165 MYOM2P54296 1465 aa35.59■■■■□ 3.29
COL13A1-214ENST00000522165 COL17A1Q9UMD9 1497 aaPredicted RBP35.59■■■■□ 3.29
COL13A1-214ENST00000522165 CAMSAP1Q5T5Y3 1602 aa35.58■■■■□ 3.29
COL13A1-214ENST00000522165 MROH2AA6NES4 1674 aa35.57■■■■□ 3.28
COL13A1-214ENST00000522165 IQGAP1P46940 1657 aa35.57■■■■□ 3.28
COL13A1-214ENST00000522165 KIAA1210Q9ULL0 1709 aa35.56■■■■□ 3.28
COL13A1-214ENST00000522165 TSPOAP1O95153 1857 aa35.56■■■■□ 3.28
COL13A1-214ENST00000522165 IFT172Q9UG01 1749 aa35.55■■■■□ 3.28
COL13A1-214ENST00000522165 ADGRB3O60242 1522 aa35.55■■■■□ 3.28
COL13A1-214ENST00000522165 MRS2Q9HD23 443 aa35.52■■■■□ 3.28
COL13A1-214ENST00000522165 DISP3Q9P2K9 1392 aa35.51■■■■□ 3.28
COL13A1-214ENST00000522165 CFAP65Q6ZU64 1925 aaKnown RBP35.51■■■■□ 3.28
COL13A1-214ENST00000522165 ZC3H13Q5T200 1668 aaKnown RBP35.5■■■■□ 3.27
COL13A1-214ENST00000522165 SCAF11Q99590 1463 aaKnown RBP35.5■■■■□ 3.27
COL13A1-214ENST00000522165 NOS1P29475 1434 aa35.49■■■■□ 3.27
COL13A1-214ENST00000522165 ARHGAP31Q2M1Z3 1444 aa35.47■■■■□ 3.27
COL13A1-214ENST00000522165 TMF1P82094 1093 aa35.47■■■■□ 3.27
COL13A1-214ENST00000522165 SIGLEC1Q9BZZ2 1709 aa35.47■■■■□ 3.27
COL13A1-214ENST00000522165 NRXN1Q9ULB1 1477 aa35.46■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms