RNA–Protein interactions for RNA: ENST00000522139.1

CNOT8-220, Transcript of CCR4-NOT transcription complex subunit 8, humanhuman

TSL 3

Gene CNOT8, Length 566 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT8-220ENST00000522139 PHF14O94880 888 aa10.58□□□□□ -0.72
CNOT8-220ENST00000522139 FECHP22830 423 aa10.58□□□□□ -0.72
CNOT8-220ENST00000522139 PDE4DQ08499 809 aa10.58□□□□□ -0.72
CNOT8-220ENST00000522139 MAP2K5Q13163 448 aa10.58□□□□□ -0.72
CNOT8-220ENST00000522139 HIC1Q14526 733 aa10.57□□□□□ -0.72
CNOT8-220ENST00000522139 EPAS1Q99814 870 aa10.57□□□□□ -0.72
CNOT8-220ENST00000522139 PTGDRQ13258 359 aa10.56□□□□□ -0.72
CNOT8-220ENST00000522139 CCDC102AQ96A19 550 aa10.56□□□□□ -0.72
CNOT8-220ENST00000522139 RBM33Q96EV2 1170 aaKnown RBP10.56□□□□□ -0.72
CNOT8-220ENST00000522139 PCDHGA10Q9Y5H3 936 aa10.56□□□□□ -0.72
CNOT8-220ENST00000522139 IRF6O14896 467 aa10.55□□□□□ -0.72
CNOT8-220ENST00000522139 EN1Q05925 392 aaPredicted RBP10.55□□□□□ -0.72
CNOT8-220ENST00000522139 VARS2Q5ST30 1063 aaKnown RBP10.55□□□□□ -0.72
CNOT8-220ENST00000522139 CDHR5Q9HBB8 845 aa10.55□□□□□ -0.72
CNOT8-220ENST00000522139 PSDA5PKW4 1024 aaPredicted RBP10.54□□□□□ -0.72
CNOT8-220ENST00000522139 MAP3K7O43318 606 aa10.54□□□□□ -0.72
CNOT8-220ENST00000522139 CDAN1Q8IWY9 1227 aa10.54□□□□□ -0.72
CNOT8-220ENST00000522139 KDM4CQ9H3R0 1056 aa10.54□□□□□ -0.72
CNOT8-220ENST00000522139 TYW1BQ6NUM6 668 aa10.53□□□□□ -0.72
CNOT8-220ENST00000522139 LHX6Q9UPM6 363 aa10.53□□□□□ -0.72
CNOT8-220ENST00000522139 POTEB3A0JP26 581 aa10.52□□□□□ -0.73
CNOT8-220ENST00000522139 POTEBQ6S5H4 581 aa10.52□□□□□ -0.73
CNOT8-220ENST00000522139 NPDC1Q9NQX5 325 aaPredicted RBP10.52□□□□□ -0.73
CNOT8-220ENST00000522139 TSR1Q2NL82 804 aaKnown RBP10.51□□□□□ -0.73
CNOT8-220ENST00000522139 IL27Q8NEV9 243 aa10.5□□□□□ -0.73
CNOT8-220ENST00000522139 JPH4Q96JJ6 628 aa10.5□□□□□ -0.73
CNOT8-220ENST00000522139 AMHR2Q16671 573 aa10.49□□□□□ -0.73
CNOT8-220ENST00000522139 DAXXQ9UER7 740 aaPredicted RBP10.49□□□□□ -0.73
CNOT8-220ENST00000522139 TIMELESSQ9UNS1 1208 aa10.49□□□□□ -0.73
CNOT8-220ENST00000522139 FOSBP53539 338 aa10.48□□□□□ -0.73
CNOT8-220ENST00000522139 ZNF687Q8N1G0 1237 aa10.48□□□□□ -0.73
CNOT8-220ENST00000522139 FBXW7Q969H0 707 aa10.48□□□□□ -0.73
CNOT8-220ENST00000522139 ERICH6Q7L0X2 663 aa10.47□□□□□ -0.73
CNOT8-220ENST00000522139 ZNF454Q8N9F8 522 aa10.47□□□□□ -0.73
CNOT8-220ENST00000522139 PPP4R3BQ5MIZ7 849 aa10.46□□□□□ -0.73
CNOT8-220ENST00000522139 PARP9Q8IXQ6 854 aa10.45□□□□□ -0.74
CNOT8-220ENST00000522139 ZDHHC16Q969W1 377 aa10.44□□□□□ -0.74
CNOT8-220ENST00000522139 PBX2P40425 430 aa10.43□□□□□ -0.74
CNOT8-220ENST00000522139 C6orf132Q5T0Z8 1188 aa10.43□□□□□ -0.74
CNOT8-220ENST00000522139 FAM117AQ9C073 453 aa10.43□□□□□ -0.74
CNOT8-220ENST00000522139 TTLL12Q14166 644 aaPredicted RBP10.41□□□□□ -0.74
CNOT8-220ENST00000522139 ADAM33Q9BZ11 813 aa10.41□□□□□ -0.74
CNOT8-220ENST00000522139 KRTAP3-3Q9BYR6 98 aa10.4□□□□□ -0.74
CNOT8-220ENST00000522139 KRTAP3-2Q9BYR7 98 aa10.4□□□□□ -0.74
CNOT8-220ENST00000522139 FAM161AQ3B820 660 aa10.38□□□□□ -0.75
CNOT8-220ENST00000522139 PADI6Q6TGC4 694 aa10.38□□□□□ -0.75
CNOT8-220ENST00000522139 REPIN1Q9BWE0 567 aaKnown RBP10.38□□□□□ -0.75
CNOT8-220ENST00000522139 PLEKHG3A1L390 1219 aa10.37□□□□□ -0.75
CNOT8-220ENST00000522139 GIGYF2Q6Y7W6 1299 aaKnown RBP10.37□□□□□ -0.75
CNOT8-220ENST00000522139 CERKQ8TCT0 537 aa10.37□□□□□ -0.75
CNOT8-220ENST00000522139 KCNH8Q96L42 1107 aa10.37□□□□□ -0.75
CNOT8-220ENST00000522139 PHOX2BQ99453 314 aa10.37□□□□□ -0.75
CNOT8-220ENST00000522139 TMUB1Q9BVT8 246 aa10.37□□□□□ -0.75
CNOT8-220ENST00000522139 C14orf37Q86TY3 774 aa10.36□□□□□ -0.75
CNOT8-220ENST00000522139 TTC13Q8NBP0 860 aa10.36□□□□□ -0.75
CNOT8-220ENST00000522139 ARHGAP33O14559 1287 aa10.35□□□□□ -0.75
CNOT8-220ENST00000522139 DDRGK1Q96HY6 314 aa10.35□□□□□ -0.75
CNOT8-220ENST00000522139 BCL2L12Q9HB09 334 aa10.35□□□□□ -0.75
CNOT8-220ENST00000522139 MDM2Q00987 491 aaPredicted RBP10.34□□□□□ -0.75
CNOT8-220ENST00000522139 RBM27Q9P2N5 1060 aaKnown RBP10.34□□□□□ -0.75
CNOT8-220ENST00000522139 MS4A1P11836 297 aa10.33□□□□□ -0.76
CNOT8-220ENST00000522139 LSM11P83369 360 aaKnown RBP eCLIP10.33□□□□□ -0.76
CNOT8-220ENST00000522139 POTEEQ6S8J3 1075 aa10.33□□□□□ -0.76
CNOT8-220ENST00000522139 ADGRG1Q9Y653 693 aa10.33□□□□□ -0.76
CNOT8-220ENST00000522139 OATP04181 439 aa10.32□□□□□ -0.76
CNOT8-220ENST00000522139 CLCN1P35523 988 aa10.32□□□□□ -0.76
CNOT8-220ENST00000522139 PRSS12P56730 875 aa10.32□□□□□ -0.76
CNOT8-220ENST00000522139 METTL3Q86U44 580 aaKnown RBP10.32□□□□□ -0.76
CNOT8-220ENST00000522139 NLRP7Q8WX94 980 aa10.32□□□□□ -0.76
CNOT8-220ENST00000522139 AXIN2Q9Y2T1 843 aa10.32□□□□□ -0.76
CNOT8-220ENST00000522139 COL9A1P20849 921 aa10.31□□□□□ -0.76
CNOT8-220ENST00000522139 PTPREP23469 700 aa10.31□□□□□ -0.76
CNOT8-220ENST00000522139 CDCA7LQ96GN5 454 aa10.31□□□□□ -0.76
CNOT8-220ENST00000522139 KCNK17Q96T54 332 aa10.31□□□□□ -0.76
CNOT8-220ENST00000522139 GPCPD1Q9NPB8 672 aa10.31□□□□□ -0.76
CNOT8-220ENST00000522139 PXYLP1Q8TE99 480 aa10.29□□□□□ -0.76
CNOT8-220ENST00000522139 GOPCQ9HD26 462 aa10.29□□□□□ -0.76
CNOT8-220ENST00000522139 PSEN2P49810 448 aa10.28□□□□□ -0.76
CNOT8-220ENST00000522139 ANKRD13DQ6ZTN6 518 aa10.28□□□□□ -0.76
CNOT8-220ENST00000522139 FAM198AQ9UFP1 575 aa10.28□□□□□ -0.76
CNOT8-220ENST00000522139 SPNS2Q8IVW8 549 aa10.27□□□□□ -0.77
CNOT8-220ENST00000522139 SSTR3P32745 418 aaPredicted RBP10.26□□□□□ -0.77
CNOT8-220ENST00000522139 TK2O00142 265 aa10.25□□□□□ -0.77
CNOT8-220ENST00000522139 DMRTA1Q5VZB9 504 aa10.25□□□□□ -0.77
CNOT8-220ENST00000522139 PPP1R3GB7ZBB8 358 aa10.24□□□□□ -0.77
CNOT8-220ENST00000522139 RBM46Q8TBY0 533 aaKnown RBP10.24□□□□□ -0.77
CNOT8-220ENST00000522139 FAM217BQ9NTX9 383 aaPredicted RBP10.23□□□□□ -0.77
CNOT8-220ENST00000522139 TSKSQ9UJT2 592 aa10.23□□□□□ -0.77
CNOT8-220ENST00000522139 ADGRD1Q6QNK2 874 aa10.22□□□□□ -0.77
CNOT8-220ENST00000522139 BEGAINQ9BUH8 593 aa10.22□□□□□ -0.77
CNOT8-220ENST00000522139 SLC4A5Q9BY07 1137 aa10.22□□□□□ -0.77
CNOT8-220ENST00000522139 C3orf80F5H4A9 247 aa10.21□□□□□ -0.77
CNOT8-220ENST00000522139 EYA1Q99502 592 aa10.21□□□□□ -0.77
CNOT8-220ENST00000522139 ZBED2Q9BTP6 218 aa10.2□□□□□ -0.78
CNOT8-220ENST00000522139 RCCD1A6NED2 376 aa10.19□□□□□ -0.78
CNOT8-220ENST00000522139 TRIM6-TRIM34B2RNG4 842 aa10.19□□□□□ -0.78
CNOT8-220ENST00000522139 NUDT18Q6ZVK8 323 aa10.19□□□□□ -0.78
CNOT8-220ENST00000522139 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.18□□□□□ -0.78
CNOT8-220ENST00000522139 MMRN1Q13201 1228 aa10.18□□□□□ -0.78
CNOT8-220ENST00000522139 PCMTD1Q96MG8 357 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms