RNA–Protein interactions for RNA: ENST00000522073.5

TTC1-204, Transcript of tetratricopeptide repeat domain 1, humanhuman

TSL 2

Gene TTC1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-204ENST00000522073 THSD4Q6ZMP0 1018 aa14□□□□□ -0.17
TTC1-204ENST00000522073 MRPL50Q8N5N7 158 aaKnown RBP13.99□□□□□ -0.17
TTC1-204ENST00000522073 CADPS2Q86UW7 1296 aa13.97□□□□□ -0.17
TTC1-204ENST00000522073 PCDHGA10Q9Y5H3 936 aa13.97□□□□□ -0.17
TTC1-204ENST00000522073 GOLGA8CPA6NN73 597 aa13.96□□□□□ -0.17
TTC1-204ENST00000522073 WNT2BQ93097 391 aa13.96□□□□□ -0.17
TTC1-204ENST00000522073 IFFO2Q5TF58 517 aa13.94□□□□□ -0.18
TTC1-204ENST00000522073 NBPF3Q9H094 633 aa13.94□□□□□ -0.18
TTC1-204ENST00000522073 PPP1R3GB7ZBB8 358 aa13.92□□□□□ -0.18
TTC1-204ENST00000522073 PHF14O94880 888 aa13.89□□□□□ -0.19
TTC1-204ENST00000522073 COL9A1P20849 921 aa13.89□□□□□ -0.19
TTC1-204ENST00000522073 RABGEF1Q9UJ41 708 aa13.89□□□□□ -0.19
TTC1-204ENST00000522073 NCAPD3P42695 1498 aa13.88□□□□□ -0.19
TTC1-204ENST00000522073 TYW1BQ6NUM6 668 aa13.88□□□□□ -0.19
TTC1-204ENST00000522073 FBXW7Q969H0 707 aa13.88□□□□□ -0.19
TTC1-204ENST00000522073 ATAD2BQ9ULI0 1458 aa13.87□□□□□ -0.19
TTC1-204ENST00000522073 CAMK2BQ13554 666 aa13.87□□□□□ -0.19
TTC1-204ENST00000522073 PROX2Q3B8N5 592 aa13.87□□□□□ -0.19
TTC1-204ENST00000522073 RGS20O76081 388 aa13.83□□□□□ -0.2
TTC1-204ENST00000522073 SMARCA4P51532 1647 aa13.82□□□□□ -0.2
TTC1-204ENST00000522073 BAZ1AQ9NRL2 1556 aaPredicted RBP13.82□□□□□ -0.2
TTC1-204ENST00000522073 SMARCA2P51531 1590 aa13.8□□□□□ -0.2
TTC1-204ENST00000522073 A0A0G2JS52 829 aa13.8□□□□□ -0.2
TTC1-204ENST00000522073 ANKK1Q8NFD2 765 aa13.8□□□□□ -0.2
TTC1-204ENST00000522073 DPYSL4O14531 572 aa13.79□□□□□ -0.2
TTC1-204ENST00000522073 LAPTM4BQ86VI4 370 aa13.79□□□□□ -0.2
TTC1-204ENST00000522073 EPAS1Q99814 870 aa13.79□□□□□ -0.2
TTC1-204ENST00000522073 C6orf132Q5T0Z8 1188 aa13.78□□□□□ -0.2
TTC1-204ENST00000522073 KIAA1468Q9P260 1216 aa13.78□□□□□ -0.2
TTC1-204ENST00000522073 ONECUT3O60422 494 aaPredicted RBP13.77□□□□□ -0.21
TTC1-204ENST00000522073 BAZ1BQ9UIG0 1483 aaKnown RBP13.77□□□□□ -0.21
TTC1-204ENST00000522073 MROH2BQ7Z745 1585 aa13.76□□□□□ -0.21
TTC1-204ENST00000522073 HMGXB3Q12766 1538 aa13.74□□□□□ -0.21
TTC1-204ENST00000522073 SOWAHBA6NEL2 793 aa13.74□□□□□ -0.21
TTC1-204ENST00000522073 BCAMP50895 628 aa13.74□□□□□ -0.21
TTC1-204ENST00000522073 ZFRQ96KR1 1074 aaKnown RBP13.73□□□□□ -0.21
TTC1-204ENST00000522073 ITGBL1O95965 494 aaPredicted RBP13.72□□□□□ -0.21
TTC1-204ENST00000522073 TRIM6-TRIM34B2RNG4 842 aa13.7□□□□□ -0.22
TTC1-204ENST00000522073 BBXQ8WY36 941 aaPredicted RBP13.7□□□□□ -0.22
TTC1-204ENST00000522073 DDX12PQ92771 950 aa13.69□□□□□ -0.22
TTC1-204ENST00000522073 RBM33Q96EV2 1170 aaKnown RBP13.69□□□□□ -0.22
TTC1-204ENST00000522073 NYAP1Q6ZVC0 841 aa13.68□□□□□ -0.22
TTC1-204ENST00000522073 SEPT9Q9UHD8 586 aaPredicted RBP13.68□□□□□ -0.22
TTC1-204ENST00000522073 ERCC6Q03468 1493 aa13.67□□□□□ -0.22
TTC1-204ENST00000522073 PEG3Q9GZU2 1588 aa13.66□□□□□ -0.22
TTC1-204ENST00000522073 WBP1LQ9NX94 342 aa13.66□□□□□ -0.22
TTC1-204ENST00000522073 FAM98CQ17RN3 349 aaKnown RBP13.65□□□□□ -0.22
TTC1-204ENST00000522073 IRX2Q9BZI1 471 aaPredicted RBP13.65□□□□□ -0.22
TTC1-204ENST00000522073 PDIA6Q15084 440 aa13.63□□□□□ -0.23
TTC1-204ENST00000522073 NESP48681 1621 aa13.62□□□□□ -0.23
TTC1-204ENST00000522073 EN1Q05925 392 aaPredicted RBP13.62□□□□□ -0.23
TTC1-204ENST00000522073 NBR1Q14596 966 aa13.6□□□□□ -0.23
TTC1-204ENST00000522073 TSR1Q2NL82 804 aaKnown RBP13.6□□□□□ -0.23
TTC1-204ENST00000522073 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.59□□□□□ -0.23
TTC1-204ENST00000522073 TSKSQ9UJT2 592 aa13.59□□□□□ -0.23
TTC1-204ENST00000522073 RSF1Q96T23 1441 aaPredicted RBP13.58□□□□□ -0.24
TTC1-204ENST00000522073 TSR3Q9UJK0 312 aaKnown RBP13.58□□□□□ -0.24
TTC1-204ENST00000522073 SPDYE16A6NNV3 312 aaPredicted RBP13.57□□□□□ -0.24
TTC1-204ENST00000522073 MAP3K7O43318 606 aa13.57□□□□□ -0.24
TTC1-204ENST00000522073 KCNC4Q03721 635 aa13.57□□□□□ -0.24
TTC1-204ENST00000522073 LRCH3Q96II8 777 aa13.57□□□□□ -0.24
TTC1-204ENST00000522073 PACS2Q86VP3 889 aa13.56□□□□□ -0.24
TTC1-204ENST00000522073 SPRYD3Q8NCJ5 442 aa13.56□□□□□ -0.24
TTC1-204ENST00000522073 HPS5Q9UPZ3 1129 aa13.56□□□□□ -0.24
TTC1-204ENST00000522073 WIZO95785 1651 aa13.53□□□□□ -0.24
TTC1-204ENST00000522073 CUX2O14529 1486 aa13.52□□□□□ -0.25
TTC1-204ENST00000522073 CADPSQ9ULU8 1353 aa13.51□□□□□ -0.25
TTC1-204ENST00000522073 E2F4Q16254 413 aa13.51□□□□□ -0.25
TTC1-204ENST00000522073 CDCA7LQ96GN5 454 aa13.51□□□□□ -0.25
TTC1-204ENST00000522073 ARIH1Q9Y4X5 557 aaPredicted RBP13.51□□□□□ -0.25
TTC1-204ENST00000522073 PRIM1P49642 420 aaKnown RBP13.5□□□□□ -0.25
TTC1-204ENST00000522073 PDS5BQ9NTI5 1447 aa13.49□□□□□ -0.25
TTC1-204ENST00000522073 PRSS12P56730 875 aa13.49□□□□□ -0.25
TTC1-204ENST00000522073 FAM198AQ9UFP1 575 aa13.49□□□□□ -0.25
TTC1-204ENST00000522073 CERKQ8TCT0 537 aa13.47□□□□□ -0.25
TTC1-204ENST00000522073 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.47□□□□□ -0.25
TTC1-204ENST00000522073 LAMC3Q9Y6N6 1575 aa13.46□□□□□ -0.25
TTC1-204ENST00000522073 SMAPO00193 183 aa13.46□□□□□ -0.25
TTC1-204ENST00000522073 PPP4CP60510 307 aa13.46□□□□□ -0.25
TTC1-204ENST00000522073 GRXCR2A6NFK2 248 aa13.44□□□□□ -0.26
TTC1-204ENST00000522073 SAMD7Q7Z3H4 446 aa13.44□□□□□ -0.26
TTC1-204ENST00000522073 C3orf80F5H4A9 247 aa13.43□□□□□ -0.26
TTC1-204ENST00000522073 TOP2AP11388 1531 aaKnown RBP13.43□□□□□ -0.26
TTC1-204ENST00000522073 TATDN2Q93075 761 aa13.42□□□□□ -0.26
TTC1-204ENST00000522073 OSBPP22059 807 aa13.41□□□□□ -0.26
TTC1-204ENST00000522073 WDR70Q9NW82 654 aa13.41□□□□□ -0.26
TTC1-204ENST00000522073 TJAP1Q5JTD0 557 aa13.4□□□□□ -0.26
TTC1-204ENST00000522073 PNMA3Q9UL41 463 aa13.39□□□□□ -0.27
TTC1-204ENST00000522073 NBPF26B4DH59 902 aa13.38□□□□□ -0.27
TTC1-204ENST00000522073 CDHR5Q9HBB8 845 aa13.38□□□□□ -0.27
TTC1-204ENST00000522073 PAXIP1Q6ZW49 1069 aaPredicted RBP13.37□□□□□ -0.27
TTC1-204ENST00000522073 CFAP44Q96MT7 982 aa13.36□□□□□ -0.27
TTC1-204ENST00000522073 CFTRP13569 1480 aa13.36□□□□□ -0.27
TTC1-204ENST00000522073 Q6ZNB5 142 aa13.35□□□□□ -0.27
TTC1-204ENST00000522073 RBM27Q9P2N5 1060 aaKnown RBP13.35□□□□□ -0.27
TTC1-204ENST00000522073 MRC2Q9UBG0 1479 aa13.35□□□□□ -0.27
TTC1-204ENST00000522073 THOC2Q8NI27 1593 aaKnown RBP13.34□□□□□ -0.27
TTC1-204ENST00000522073 NUDT18Q6ZVK8 323 aa13.34□□□□□ -0.27
TTC1-204ENST00000522073 FANCD2Q9BXW9 1451 aa13.34□□□□□ -0.27
TTC1-204ENST00000522073 MTRQ99707 1265 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms