RNA–Protein interactions for RNA: ENST00000521918.6

SPIDR-216, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-216ENST00000521918 KIF13AQ9H1H9 1805 aa9.96□□□□□ -0.81
SPIDR-216ENST00000521918 VSIG10Q8N0Z9 540 aa9.96□□□□□ -0.82
SPIDR-216ENST00000521918 ABCC2Q92887 1545 aa9.96□□□□□ -0.82
SPIDR-216ENST00000521918 POTEB2H3BUK9 544 aa9.95□□□□□ -0.82
SPIDR-216ENST00000521918 TMEM121BQ9BXQ6 578 aaPredicted RBP9.95□□□□□ -0.82
SPIDR-216ENST00000521918 KIF21BO75037 1637 aa9.95□□□□□ -0.82
SPIDR-216ENST00000521918 SAMD9Q5K651 1589 aa9.94□□□□□ -0.82
SPIDR-216ENST00000521918 DIP2BQ9P265 1576 aa9.94□□□□□ -0.82
SPIDR-216ENST00000521918 ABCC10Q5T3U5 1492 aa9.94□□□□□ -0.82
SPIDR-216ENST00000521918 MICALL2Q8IY33 904 aa9.94□□□□□ -0.82
SPIDR-216ENST00000521918 L3MBTL3Q96JM7 780 aaPredicted RBP9.94□□□□□ -0.82
SPIDR-216ENST00000521918 GOLGA3Q08378 1498 aa9.93□□□□□ -0.82
SPIDR-216ENST00000521918 UACAQ9BZF9 1416 aa9.93□□□□□ -0.82
SPIDR-216ENST00000521918 BOLA1Q9Y3E2 137 aa9.93□□□□□ -0.82
SPIDR-216ENST00000521918 KDM5BQ9UGL1 1544 aa9.92□□□□□ -0.82
SPIDR-216ENST00000521918 LHX8Q68G74 356 aa9.92□□□□□ -0.82
SPIDR-216ENST00000521918 G3V3G9 751 aa9.91□□□□□ -0.82
SPIDR-216ENST00000521918 ABCA8O94911 1581 aa9.91□□□□□ -0.82
SPIDR-216ENST00000521918 POTEJP0CG39 1038 aa9.9□□□□□ -0.82
SPIDR-216ENST00000521918 PLB1Q6P1J6 1458 aa9.9□□□□□ -0.83
SPIDR-216ENST00000521918 ZCCHC11Q5TAX3 1644 aaKnown RBP9.89□□□□□ -0.83
SPIDR-216ENST00000521918 NCKAP5LQ9HCH0 1330 aa9.88□□□□□ -0.83
SPIDR-216ENST00000521918 ASXL2Q76L83 1435 aa9.88□□□□□ -0.83
SPIDR-216ENST00000521918 MAMSTRQ6ZN01 415 aa9.87□□□□□ -0.83
SPIDR-216ENST00000521918 TTBK1Q5TCY1 1321 aaPredicted RBP9.86□□□□□ -0.83
SPIDR-216ENST00000521918 GLI2P10070 1586 aa9.86□□□□□ -0.83
SPIDR-216ENST00000521918 FAM9AQ8IZU1 332 aaPredicted RBP9.86□□□□□ -0.83
SPIDR-216ENST00000521918 CRISPLD2Q9H0B8 497 aa9.86□□□□□ -0.83
SPIDR-216ENST00000521918 SCUBE2Q9NQ36 999 aa9.85□□□□□ -0.83
SPIDR-216ENST00000521918 PPRC1Q5VV67 1664 aaKnown RBP9.84□□□□□ -0.83
SPIDR-216ENST00000521918 EFCAB5A4FU69 1503 aa9.84□□□□□ -0.83
SPIDR-216ENST00000521918 EPRSP07814 1512 aaKnown RBP9.84□□□□□ -0.83
SPIDR-216ENST00000521918 FAM69CQ0P6D2 419 aa9.84□□□□□ -0.83
SPIDR-216ENST00000521918 C3orf67Q6ZVT6 689 aa9.84□□□□□ -0.83
SPIDR-216ENST00000521918 TMEM92Q6UXU6 159 aa9.83□□□□□ -0.84
SPIDR-216ENST00000521918 WDR7Q9Y4E6 1490 aa9.83□□□□□ -0.84
SPIDR-216ENST00000521918 FHOD3Q2V2M9 1422 aa9.82□□□□□ -0.84
SPIDR-216ENST00000521918 GPHNQ9NQX3 736 aaPredicted RBP9.82□□□□□ -0.84
SPIDR-216ENST00000521918 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.82□□□□□ -0.84
SPIDR-216ENST00000521918 RAPGEF6Q8TEU7 1601 aa9.82□□□□□ -0.84
SPIDR-216ENST00000521918 MAP3K4Q9Y6R4 1608 aa9.82□□□□□ -0.84
SPIDR-216ENST00000521918 KIF3CO14782 793 aa9.81□□□□□ -0.84
SPIDR-216ENST00000521918 PDE4AP27815 886 aa9.81□□□□□ -0.84
SPIDR-216ENST00000521918 MFSD10Q14728 455 aa9.81□□□□□ -0.84
SPIDR-216ENST00000521918 NUP153P49790 1475 aaKnown RBP9.8□□□□□ -0.84
SPIDR-216ENST00000521918 OTUD5Q96G74 571 aa9.8□□□□□ -0.84
SPIDR-216ENST00000521918 ATP10BO94823 1461 aa9.79□□□□□ -0.84
SPIDR-216ENST00000521918 ARHGAP35Q9NRY4 1499 aa9.79□□□□□ -0.84
SPIDR-216ENST00000521918 P3H3Q8IVL6 736 aa9.79□□□□□ -0.84
SPIDR-216ENST00000521918 LARP6Q9BRS8 491 aaKnown RBP9.79□□□□□ -0.84
SPIDR-216ENST00000521918 TSPOAP1O95153 1857 aa9.78□□□□□ -0.84
SPIDR-216ENST00000521918 C2orf72A6NCS6 295 aa9.77□□□□□ -0.85
SPIDR-216ENST00000521918 DDX27Q96GQ7 796 aaKnown RBP9.76□□□□□ -0.85
SPIDR-216ENST00000521918 CFAP43Q8NDM7 1665 aa9.76□□□□□ -0.85
SPIDR-216ENST00000521918 KDM6BO15054 1643 aa9.75□□□□□ -0.85
SPIDR-216ENST00000521918 FOXK1P85037 733 aa9.75□□□□□ -0.85
SPIDR-216ENST00000521918 DSG2Q14126 1118 aa9.75□□□□□ -0.85
SPIDR-216ENST00000521918 SLAIN1Q8ND83 568 aa9.75□□□□□ -0.85
SPIDR-216ENST00000521918 TMC2Q8TDI7 906 aa9.75□□□□□ -0.85
SPIDR-216ENST00000521918 WDR70Q9NW82 654 aa9.75□□□□□ -0.85
SPIDR-216ENST00000521918 MAGI3Q5TCQ9 1506 aa9.74□□□□□ -0.85
SPIDR-216ENST00000521918 ABCA9Q8IUA7 1624 aa9.74□□□□□ -0.85
SPIDR-216ENST00000521918 UBTFP17480 764 aaKnown RBP9.73□□□□□ -0.85
SPIDR-216ENST00000521918 PPP1R15BQ5SWA1 713 aa9.73□□□□□ -0.85
SPIDR-216ENST00000521918 TEX14Q8IWB6 1497 aa9.72□□□□□ -0.85
SPIDR-216ENST00000521918 COL17A1Q9UMD9 1497 aaPredicted RBP9.72□□□□□ -0.85
SPIDR-216ENST00000521918 RANGAP1P46060 587 aaPredicted RBP9.72□□□□□ -0.85
SPIDR-216ENST00000521918 FMN1Q68DA7 1419 aa9.72□□□□□ -0.85
SPIDR-216ENST00000521918 CDK13Q14004 1512 aaKnown RBP9.72□□□□□ -0.85
SPIDR-216ENST00000521918 HECW1Q76N89 1606 aa9.71□□□□□ -0.85
SPIDR-216ENST00000521918 ARID3CA6NKF2 412 aa9.71□□□□□ -0.86
SPIDR-216ENST00000521918 CAMK2BQ13554 666 aa9.71□□□□□ -0.86
SPIDR-216ENST00000521918 KCNV2Q8TDN2 545 aa9.71□□□□□ -0.86
SPIDR-216ENST00000521918 CD109Q6YHK3 1445 aa9.71□□□□□ -0.86
SPIDR-216ENST00000521918 E2F4Q16254 413 aa9.7□□□□□ -0.86
SPIDR-216ENST00000521918 PLPP6Q8IY26 295 aa9.69□□□□□ -0.86
SPIDR-216ENST00000521918 LRRIQ1Q96JM4 1722 aa9.69□□□□□ -0.86
SPIDR-216ENST00000521918 PCF11O94913 1555 aaKnown RBP9.68□□□□□ -0.86
SPIDR-216ENST00000521918 TTC37Q6PGP7 1564 aa9.67□□□□□ -0.86
SPIDR-216ENST00000521918 KCNH8Q96L42 1107 aa9.67□□□□□ -0.86
SPIDR-216ENST00000521918 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.66□□□□□ -0.86
SPIDR-216ENST00000521918 CLIP1P30622 1438 aa9.66□□□□□ -0.86
SPIDR-216ENST00000521918 CASKIN1Q8WXD9 1431 aa9.66□□□□□ -0.86
SPIDR-216ENST00000521918 ARAP3Q8WWN8 1544 aa9.66□□□□□ -0.86
SPIDR-216ENST00000521918 EMILIN3Q9NT22 766 aa9.65□□□□□ -0.86
SPIDR-216ENST00000521918 NEO1Q92859 1461 aa9.65□□□□□ -0.87
SPIDR-216ENST00000521918 FYCO1Q9BQS8 1478 aa9.64□□□□□ -0.87
SPIDR-216ENST00000521918 FRMPD1Q5SYB0 1578 aa9.63□□□□□ -0.87
SPIDR-216ENST00000521918 ARIH1Q9Y4X5 557 aaPredicted RBP9.63□□□□□ -0.87
SPIDR-216ENST00000521918 CCDC18Q5T9S5 1454 aa9.62□□□□□ -0.87
SPIDR-216ENST00000521918 ARHGEF1Q92888 912 aaKnown RBP9.62□□□□□ -0.87
SPIDR-216ENST00000521918 KIF14Q15058 1648 aa9.62□□□□□ -0.87
SPIDR-216ENST00000521918 TROQ12816 1431 aaPredicted RBP9.62□□□□□ -0.87
SPIDR-216ENST00000521918 PHLDB1Q86UU1 1377 aa9.62□□□□□ -0.87
SPIDR-216ENST00000521918 PLEKHD1A6NEE1 506 aa9.61□□□□□ -0.87
SPIDR-216ENST00000521918 SNPHO15079 494 aa9.61□□□□□ -0.87
SPIDR-216ENST00000521918 CEP162Q5TB80 1403 aa9.61□□□□□ -0.87
SPIDR-216ENST00000521918 CFAP74Q9C0B2 1584 aa9.6□□□□□ -0.87
SPIDR-216ENST00000521918 SLC34A2O95436 690 aa9.59□□□□□ -0.87
SPIDR-216ENST00000521918 FANCAO15360 1455 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms