RNA–Protein interactions for RNA: ENST00000521550.5

SPIDR-214, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,849 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-214ENST00000521550 SCAF1Q9H7N4 1312 aaKnown RBP19.98■□□□□ 0.79
SPIDR-214ENST00000521550 CAMSAP2Q08AD1 1489 aa19.97■□□□□ 0.79
SPIDR-214ENST00000521550 ESF1Q9H501 851 aaKnown RBP19.95■□□□□ 0.78
SPIDR-214ENST00000521550 MBD5Q9P267 1494 aa19.95■□□□□ 0.78
SPIDR-214ENST00000521550 CEBPAP49715 358 aaPredicted RBP19.95■□□□□ 0.78
SPIDR-214ENST00000521550 YTHDC1Q96MU7 727 aaKnown RBP19.94■□□□□ 0.78
SPIDR-214ENST00000521550 MPHOSPH9Q99550 1183 aa19.94■□□□□ 0.78
SPIDR-214ENST00000521550 SETD1BQ9UPS6 1966 aaKnown RBP19.93■□□□□ 0.78
SPIDR-214ENST00000521550 ADGBQ8N7X0 1667 aa19.92■□□□□ 0.78
SPIDR-214ENST00000521550 A2MP01023 1474 aa19.91■□□□□ 0.78
SPIDR-214ENST00000521550 PREX1Q8TCU6 1659 aa19.91■□□□□ 0.78
SPIDR-214ENST00000521550 C3P01024 1663 aa19.91■□□□□ 0.78
SPIDR-214ENST00000521550 HSPA2P54652 639 aa19.9■□□□□ 0.78
SPIDR-214ENST00000521550 PLXNC1O60486 1568 aa19.9■□□□□ 0.78
SPIDR-214ENST00000521550 ANKRD30AQ9BXX3 1397 aa19.89■□□□□ 0.78
SPIDR-214ENST00000521550 RTEL1-TNFRSF6BF6WH68 1400 aa19.89■□□□□ 0.77
SPIDR-214ENST00000521550 CCDC141Q6ZP82 1450 aa19.89■□□□□ 0.77
SPIDR-214ENST00000521550 CNTLNQ9NXG0 1405 aa19.88■□□□□ 0.77
SPIDR-214ENST00000521550 RSPH4AQ5TD94 716 aa19.88■□□□□ 0.77
SPIDR-214ENST00000521550 ADGRL2O95490 1459 aa19.88■□□□□ 0.77
SPIDR-214ENST00000521550 CROCC2H7BZ55 1655 aa19.86■□□□□ 0.77
SPIDR-214ENST00000521550 NCOA1Q15788 1441 aa19.85■□□□□ 0.77
SPIDR-214ENST00000521550 MROH2AA6NES4 1674 aa19.85■□□□□ 0.77
SPIDR-214ENST00000521550 SHANK2Q9UPX8 1470 aa19.84■□□□□ 0.77
SPIDR-214ENST00000521550 ARHGEF5Q12774 1597 aa19.84■□□□□ 0.77
SPIDR-214ENST00000521550 UHRF1BP1Q6BDS2 1440 aa19.83■□□□□ 0.77
SPIDR-214ENST00000521550 SLC4A1APQ9BWU0 796 aaKnown RBP19.83■□□□□ 0.77
SPIDR-214ENST00000521550 TSPY4P0CV99 314 aa19.83■□□□□ 0.76
SPIDR-214ENST00000521550 TSPY10P0CW01 314 aa19.83■□□□□ 0.76
SPIDR-214ENST00000521550 GGT6Q6P531 493 aa19.83■□□□□ 0.76
SPIDR-214ENST00000521550 CLTCQ00610 1675 aaKnown RBP19.81■□□□□ 0.76
SPIDR-214ENST00000521550 GTF3C3Q9Y5Q9 886 aa19.81■□□□□ 0.76
SPIDR-214ENST00000521550 DHX29Q7Z478 1369 aaKnown RBP19.81■□□□□ 0.76
SPIDR-214ENST00000521550 ZMYM3Q14202 1370 aa19.8■□□□□ 0.76
SPIDR-214ENST00000521550 ILDR1Q86SU0 546 aaPredicted RBP19.79■□□□□ 0.76
SPIDR-214ENST00000521550 DDX10Q13206 875 aaKnown RBP19.79■□□□□ 0.76
SPIDR-214ENST00000521550 PPP6R1Q9UPN7 881 aa19.79■□□□□ 0.76
SPIDR-214ENST00000521550 ANKRD30BQ9BXX2 1392 aa19.78■□□□□ 0.76
SPIDR-214ENST00000521550 RPRD2Q5VT52 1461 aaKnown RBP19.76■□□□□ 0.75
SPIDR-214ENST00000521550 NPATQ14207 1427 aa19.75■□□□□ 0.75
SPIDR-214ENST00000521550 ANKRD50Q9ULJ7 1429 aa19.75■□□□□ 0.75
SPIDR-214ENST00000521550 KIF3BO15066 747 aa19.75■□□□□ 0.75
SPIDR-214ENST00000521550 MAST1Q9Y2H9 1570 aa19.74■□□□□ 0.75
SPIDR-214ENST00000521550 ANP32CO43423 234 aa19.73■□□□□ 0.75
SPIDR-214ENST00000521550 STRCQ7RTU9 1775 aa19.72■□□□□ 0.75
SPIDR-214ENST00000521550 EIF4G2P78344 907 aaKnown RBP eCLIP19.72■□□□□ 0.753e-7■■□□□ 12.5
SPIDR-214ENST00000521550 L3MBTL2Q969R5 705 aa19.71■□□□□ 0.75
SPIDR-214ENST00000521550 PZPP20742 1482 aa19.71■□□□□ 0.75
SPIDR-214ENST00000521550 FOXD1Q16676 465 aa19.69■□□□□ 0.74
SPIDR-214ENST00000521550 DMRT2Q9Y5R5 561 aa19.69■□□□□ 0.74
SPIDR-214ENST00000521550 FAM135AQ9P2D6 1515 aa19.68■□□□□ 0.74
SPIDR-214ENST00000521550 CCER2I3L3R5 266 aa19.67■□□□□ 0.74
SPIDR-214ENST00000521550 KDM5DQ9BY66 1539 aa19.67■□□□□ 0.74
SPIDR-214ENST00000521550 HIRIP3Q9BW71 556 aaPredicted RBP19.67■□□□□ 0.74
SPIDR-214ENST00000521550 WASHC2CQ9Y4E1 1318 aa19.66■□□□□ 0.74
SPIDR-214ENST00000521550 MYO3AQ8NEV4 1616 aa19.66■□□□□ 0.74
SPIDR-214ENST00000521550 KIF15Q9NS87 1388 aa19.65■□□□□ 0.74
SPIDR-214ENST00000521550 NUP155O75694 1391 aa19.64■□□□□ 0.73
SPIDR-214ENST00000521550 EIF2AK4Q9P2K8 1649 aaKnown RBP19.64■□□□□ 0.73
SPIDR-214ENST00000521550 ZNF142P52746 1687 aaPredicted RBP19.64■□□□□ 0.73
SPIDR-214ENST00000521550 PKD2Q13563 968 aa19.64■□□□□ 0.73
SPIDR-214ENST00000521550 HSPA5P11021 654 aaKnown RBP19.63■□□□□ 0.73
SPIDR-214ENST00000521550 FBXO41Q8TF61 875 aa19.63■□□□□ 0.73
SPIDR-214ENST00000521550 RNF17Q9BXT8 1623 aaKnown RBP19.63■□□□□ 0.73
SPIDR-214ENST00000521550 CAMSAP1Q5T5Y3 1602 aa19.62■□□□□ 0.73
SPIDR-214ENST00000521550 DUOX2Q9NRD8 1548 aa19.62■□□□□ 0.73
SPIDR-214ENST00000521550 CEP170BQ9Y4F5 1589 aaPredicted RBP19.62■□□□□ 0.73
SPIDR-214ENST00000521550 PTPRTO14522 1441 aa19.6■□□□□ 0.73
SPIDR-214ENST00000521550 ZC3H13Q5T200 1668 aaKnown RBP19.59■□□□□ 0.73
SPIDR-214ENST00000521550 FBXO31Q5XUX0 539 aaPredicted RBP19.58■□□□□ 0.73
SPIDR-214ENST00000521550 TNRQ92752 1358 aa19.56■□□□□ 0.72
SPIDR-214ENST00000521550 CERKQ8TCT0 537 aa19.56■□□□□ 0.72
SPIDR-214ENST00000521550 A2ML1A8K2U0 1454 aa19.56■□□□□ 0.72
SPIDR-214ENST00000521550 ABCC3O15438 1527 aa19.56■□□□□ 0.72
SPIDR-214ENST00000521550 ERBINQ96RT1 1412 aa19.55■□□□□ 0.72
SPIDR-214ENST00000521550 MROH1Q8NDA8 1641 aa19.55■□□□□ 0.72
SPIDR-214ENST00000521550 PLA2R1Q13018 1463 aa19.55■□□□□ 0.72
SPIDR-214ENST00000521550 CEP152O94986 1710 aa19.54■□□□□ 0.72
SPIDR-214ENST00000521550 NCKAP5LQ9HCH0 1330 aa19.53■□□□□ 0.72
SPIDR-214ENST00000521550 CFAP65Q6ZU64 1925 aaKnown RBP19.53■□□□□ 0.72
SPIDR-214ENST00000521550 NBPF8Q3BBV2 869 aa19.51■□□□□ 0.71
SPIDR-214ENST00000521550 WASHC2AQ641Q2 1341 aa19.51■□□□□ 0.71
SPIDR-214ENST00000521550 PRDM15P57071 1507 aaPredicted RBP19.5■□□□□ 0.71
SPIDR-214ENST00000521550 PELP1Q8IZL8 1130 aaKnown RBP19.5■□□□□ 0.71
SPIDR-214ENST00000521550 NLRP1Q9C000 1473 aa19.49■□□□□ 0.71
SPIDR-214ENST00000521550 DEPDC5O75140 1603 aa19.48■□□□□ 0.71
SPIDR-214ENST00000521550 SPATA31D1Q6ZQQ2 1576 aa19.48■□□□□ 0.71
SPIDR-214ENST00000521550 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.47■□□□□ 0.713e-6■■■□□ 15.2
SPIDR-214ENST00000521550 CCDC7Q96M83 1385 aa19.47■□□□□ 0.71
SPIDR-214ENST00000521550 UNC13BO14795 1591 aa19.47■□□□□ 0.71
SPIDR-214ENST00000521550 POLR1AO95602 1720 aaPredicted RBP19.46■□□□□ 0.71
SPIDR-214ENST00000521550 ERVK-7P63135 1459 aa19.46■□□□□ 0.71
SPIDR-214ENST00000521550 UGGT1Q9NYU2 1555 aa19.46■□□□□ 0.71
SPIDR-214ENST00000521550 THEMISQ8N1K5 641 aaPredicted RBP19.45■□□□□ 0.7
SPIDR-214ENST00000521550 KANK1Q14678 1352 aa19.45■□□□□ 0.7
SPIDR-214ENST00000521550 LTBP4Q8N2S1 1624 aa19.44■□□□□ 0.7
SPIDR-214ENST00000521550 SPATA31E1Q6ZUB1 1445 aa19.44■□□□□ 0.7
SPIDR-214ENST00000521550 ARHGAP31Q2M1Z3 1444 aa19.42■□□□□ 0.7
SPIDR-214ENST00000521550 CCDC144AA2RUR9 1427 aa19.42■□□□□ 0.7
SPIDR-214ENST00000521550 ZNF326Q5BKZ1 582 aaKnown RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms