RNA–Protein interactions for RNA: ENST00000521167.1

TRAPPC9-209, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-209ENST00000521167 TSPY4P0CV99 314 aa16.24■□□□□ 0.19
TRAPPC9-209ENST00000521167 TSPY10P0CW01 314 aa16.24■□□□□ 0.19
TRAPPC9-209ENST00000521167 ESF1Q9H501 851 aaKnown RBP16.23■□□□□ 0.19
TRAPPC9-209ENST00000521167 PLXNC1O60486 1568 aa16.22■□□□□ 0.19
TRAPPC9-209ENST00000521167 DSG3P32926 999 aa16.22■□□□□ 0.19
TRAPPC9-209ENST00000521167 FOXD4L1Q9NU39 408 aa16.21■□□□□ 0.19
TRAPPC9-209ENST00000521167 DHX29Q7Z478 1369 aaKnown RBP16.21■□□□□ 0.19
TRAPPC9-209ENST00000521167 CNTLNQ9NXG0 1405 aa16.2■□□□□ 0.18
TRAPPC9-209ENST00000521167 MAST1Q9Y2H9 1570 aa16.17■□□□□ 0.18
TRAPPC9-209ENST00000521167 CEBPAP49715 358 aaPredicted RBP16.17■□□□□ 0.18
TRAPPC9-209ENST00000521167 MROH2AA6NES4 1674 aa16.17■□□□□ 0.18
TRAPPC9-209ENST00000521167 C3P01024 1663 aa16.17■□□□□ 0.18
TRAPPC9-209ENST00000521167 PTPN23Q9H3S7 1636 aa16.16■□□□□ 0.18
TRAPPC9-209ENST00000521167 LMTK3Q96Q04 1460 aa16.16■□□□□ 0.18
TRAPPC9-209ENST00000521167 GGT6Q6P531 493 aa16.15■□□□□ 0.18
TRAPPC9-209ENST00000521167 FGD6Q6ZV73 1430 aa16.15■□□□□ 0.18
TRAPPC9-209ENST00000521167 PREX1Q8TCU6 1659 aa16.14■□□□□ 0.18
TRAPPC9-209ENST00000521167 ZNF219Q9P2Y4 722 aaPredicted RBP16.14■□□□□ 0.17
TRAPPC9-209ENST00000521167 TCOF1Q13428 1488 aaKnown RBP16.13■□□□□ 0.17
TRAPPC9-209ENST00000521167 KIF3BO15066 747 aa16.12■□□□□ 0.17
TRAPPC9-209ENST00000521167 ZMYM3Q14202 1370 aa16.12■□□□□ 0.17
TRAPPC9-209ENST00000521167 CLTCQ00610 1675 aaKnown RBP16.11■□□□□ 0.17
TRAPPC9-209ENST00000521167 CROCC2H7BZ55 1655 aa16.1■□□□□ 0.17
TRAPPC9-209ENST00000521167 ABCC5O15440 1437 aa16.1■□□□□ 0.17
TRAPPC9-209ENST00000521167 SHANK2Q9UPX8 1470 aa16.1■□□□□ 0.17
TRAPPC9-209ENST00000521167 DNMT1P26358 1616 aaKnown RBP16.09■□□□□ 0.17
TRAPPC9-209ENST00000521167 NPATQ14207 1427 aa16.09■□□□□ 0.17
TRAPPC9-209ENST00000521167 FAM135AQ9P2D6 1515 aa16.09■□□□□ 0.17
TRAPPC9-209ENST00000521167 DAPK1P53355 1430 aa16.08■□□□□ 0.16
TRAPPC9-209ENST00000521167 UHRF1BP1Q6BDS2 1440 aa16.08■□□□□ 0.16
TRAPPC9-209ENST00000521167 HSPA2P54652 639 aa16.07■□□□□ 0.16
TRAPPC9-209ENST00000521167 EIF2AK4Q9P2K8 1649 aaKnown RBP16.07■□□□□ 0.16
TRAPPC9-209ENST00000521167 DUOX2Q9NRD8 1548 aa16.06■□□□□ 0.16
TRAPPC9-209ENST00000521167 ZBTB22O15209 634 aa16.06■□□□□ 0.16
TRAPPC9-209ENST00000521167 WASHC2CQ9Y4E1 1318 aa16.04■□□□□ 0.16
TRAPPC9-209ENST00000521167 RNF17Q9BXT8 1623 aaKnown RBP16.04■□□□□ 0.16
TRAPPC9-209ENST00000521167 FAM50AQ14320 339 aaKnown RBP16.03■□□□□ 0.16
TRAPPC9-209ENST00000521167 KDM5DQ9BY66 1539 aa16.03■□□□□ 0.16
TRAPPC9-209ENST00000521167 PTPRKQ15262 1439 aa16.02■□□□□ 0.16
TRAPPC9-209ENST00000521167 ANKRD30AQ9BXX3 1397 aa16.02■□□□□ 0.16
TRAPPC9-209ENST00000521167 KIF15Q9NS87 1388 aa16.02■□□□□ 0.16
TRAPPC9-209ENST00000521167 RRP7BPQ9NSQ0 103 aa16.02■□□□□ 0.16
TRAPPC9-209ENST00000521167 ERBINQ96RT1 1412 aa16.01■□□□□ 0.15
TRAPPC9-209ENST00000521167 CHIC2Q9UKJ5 165 aa16■□□□□ 0.15
TRAPPC9-209ENST00000521167 NCOA1Q15788 1441 aa16■□□□□ 0.15
TRAPPC9-209ENST00000521167 ZC3H13Q5T200 1668 aaKnown RBP15.99■□□□□ 0.15
TRAPPC9-209ENST00000521167 ADGRL2O95490 1459 aa15.98■□□□□ 0.15
TRAPPC9-209ENST00000521167 PZPP20742 1482 aa15.98■□□□□ 0.15
TRAPPC9-209ENST00000521167 STRCQ7RTU9 1775 aa15.98■□□□□ 0.15
TRAPPC9-209ENST00000521167 CFAP65Q6ZU64 1925 aaKnown RBP15.97■□□□□ 0.15
TRAPPC9-209ENST00000521167 MROH1Q8NDA8 1641 aa15.97■□□□□ 0.15
TRAPPC9-209ENST00000521167 ZNF142P52746 1687 aaPredicted RBP15.96■□□□□ 0.15
TRAPPC9-209ENST00000521167 PPARGC1BQ86YN6 1023 aaKnown RBP15.96■□□□□ 0.15
TRAPPC9-209ENST00000521167 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.96■□□□□ 0.15
TRAPPC9-209ENST00000521167 ABCC3O15438 1527 aa15.95■□□□□ 0.14
TRAPPC9-209ENST00000521167 MYO3AQ8NEV4 1616 aa15.95■□□□□ 0.14
TRAPPC9-209ENST00000521167 FBXO31Q5XUX0 539 aaPredicted RBP15.95■□□□□ 0.14
TRAPPC9-209ENST00000521167 CEP152O94986 1710 aa15.94■□□□□ 0.14
TRAPPC9-209ENST00000521167 DEPDC5O75140 1603 aa15.94■□□□□ 0.14
TRAPPC9-209ENST00000521167 CEP170BQ9Y4F5 1589 aaPredicted RBP15.93■□□□□ 0.14
TRAPPC9-209ENST00000521167 TNRQ92752 1358 aa15.93■□□□□ 0.14
TRAPPC9-209ENST00000521167 PRDM15P57071 1507 aaPredicted RBP15.93■□□□□ 0.14
TRAPPC9-209ENST00000521167 A2ML1A8K2U0 1454 aa15.92■□□□□ 0.14
TRAPPC9-209ENST00000521167 KANK1Q14678 1352 aa15.92■□□□□ 0.14
TRAPPC9-209ENST00000521167 ABCB7O75027 752 aa15.92■□□□□ 0.14
TRAPPC9-209ENST00000521167 CAMSAP1Q5T5Y3 1602 aa15.91■□□□□ 0.14
TRAPPC9-209ENST00000521167 PTPRTO14522 1441 aa15.91■□□□□ 0.14
TRAPPC9-209ENST00000521167 ROCK1Q13464 1354 aa15.9■□□□□ 0.14
TRAPPC9-209ENST00000521167 ARHGAP31Q2M1Z3 1444 aa15.9■□□□□ 0.14
TRAPPC9-209ENST00000521167 ANKRD50Q9ULJ7 1429 aa15.89■□□□□ 0.13
TRAPPC9-209ENST00000521167 PKD2Q13563 968 aa15.89■□□□□ 0.13
TRAPPC9-209ENST00000521167 PLA2R1Q13018 1463 aa15.89■□□□□ 0.13
TRAPPC9-209ENST00000521167 NLRP1Q9C000 1473 aa15.89■□□□□ 0.13
TRAPPC9-209ENST00000521167 SPATA31D1Q6ZQQ2 1576 aa15.88■□□□□ 0.13
TRAPPC9-209ENST00000521167 VWDEQ8N2E2 1590 aa15.87■□□□□ 0.13
TRAPPC9-209ENST00000521167 LMTK2Q8IWU2 1503 aa15.87■□□□□ 0.13
TRAPPC9-209ENST00000521167 RRBP1Q9P2E9 1410 aaKnown RBP15.86■□□□□ 0.13
TRAPPC9-209ENST00000521167 ERVK-7P63135 1459 aa15.86■□□□□ 0.13
TRAPPC9-209ENST00000521167 THEMISQ8N1K5 641 aaPredicted RBP15.86■□□□□ 0.13
TRAPPC9-209ENST00000521167 ITGAEP38570 1179 aa15.84■□□□□ 0.13
TRAPPC9-209ENST00000521167 ATF5Q9Y2D1 282 aaPredicted RBP15.84■□□□□ 0.13
TRAPPC9-209ENST00000521167 NCKAP5LQ9HCH0 1330 aa15.84■□□□□ 0.13
TRAPPC9-209ENST00000521167 ILDR1Q86SU0 546 aaPredicted RBP15.83■□□□□ 0.12
TRAPPC9-209ENST00000521167 UGGT1Q9NYU2 1555 aa15.83■□□□□ 0.12
TRAPPC9-209ENST00000521167 POLR1AO95602 1720 aaPredicted RBP15.81■□□□□ 0.12
TRAPPC9-209ENST00000521167 CERKQ8TCT0 537 aa15.81■□□□□ 0.12
TRAPPC9-209ENST00000521167 UNC13BO14795 1591 aa15.8■□□□□ 0.12
TRAPPC9-209ENST00000521167 ANKLE2Q86XL3 938 aa15.8■□□□□ 0.12
TRAPPC9-209ENST00000521167 FBXO41Q8TF61 875 aa15.8■□□□□ 0.12
TRAPPC9-209ENST00000521167 EFCAB6Q5THR3 1501 aa15.78■□□□□ 0.12
TRAPPC9-209ENST00000521167 UBR1Q8IWV7 1749 aa15.78■□□□□ 0.12
TRAPPC9-209ENST00000521167 TET3O43151 1660 aa15.78■□□□□ 0.12
TRAPPC9-209ENST00000521167 GCC2Q8IWJ2 1684 aa15.77■□□□□ 0.12
TRAPPC9-209ENST00000521167 RPRD2Q5VT52 1461 aaKnown RBP15.77■□□□□ 0.11
TRAPPC9-209ENST00000521167 NOS1P29475 1434 aa15.76■□□□□ 0.11
TRAPPC9-209ENST00000521167 ATXN8OSP0DMR3 200 aa15.75■□□□□ 0.11
TRAPPC9-209ENST00000521167 POLA2Q14181 598 aa15.75■□□□□ 0.11
TRAPPC9-209ENST00000521167 KDM5AP29375 1690 aaKnown RBP15.75■□□□□ 0.11
TRAPPC9-209ENST00000521167 MED14O60244 1454 aa15.74■□□□□ 0.11
TRAPPC9-209ENST00000521167 IDI1Q13907 227 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms