RNA–Protein interactions for RNA: ENST00000520858.5

PSD3-213, Transcript of pleckstrin and Sec7 domain containing 3, humanhuman

TSL 2

Gene PSD3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSD3-213ENST00000520858 KCNC4Q03721 635 aa12.96□□□□□ -0.33
PSD3-213ENST00000520858 EMILIN3Q9NT22 766 aa12.96□□□□□ -0.33
PSD3-213ENST00000520858 MAP3K9P80192 1104 aa12.95□□□□□ -0.34
PSD3-213ENST00000520858 KIAA1468Q9P260 1216 aa12.95□□□□□ -0.34
PSD3-213ENST00000520858 NYAP1Q6ZVC0 841 aa12.94□□□□□ -0.34
PSD3-213ENST00000520858 LARP6Q9BRS8 491 aaKnown RBP12.93□□□□□ -0.34
PSD3-213ENST00000520858 SEPT9Q9UHD8 586 aaPredicted RBP12.92□□□□□ -0.34
PSD3-213ENST00000520858 DDX27Q96GQ7 796 aaKnown RBP12.91□□□□□ -0.34
PSD3-213ENST00000520858 MFSD10Q14728 455 aa12.9□□□□□ -0.34
PSD3-213ENST00000520858 TYW1BQ6NUM6 668 aa12.9□□□□□ -0.34
PSD3-213ENST00000520858 TRAF7Q6Q0C0 670 aa12.89□□□□□ -0.35
PSD3-213ENST00000520858 LAPTM4AQ15012 233 aa12.88□□□□□ -0.35
PSD3-213ENST00000520858 RYDENQ9NUL5 291 aaKnown RBP12.88□□□□□ -0.35
PSD3-213ENST00000520858 GFRA3O60609 400 aa12.87□□□□□ -0.35
PSD3-213ENST00000520858 PHF14O94880 888 aa12.87□□□□□ -0.35
PSD3-213ENST00000520858 FBXW7Q969H0 707 aa12.87□□□□□ -0.35
PSD3-213ENST00000520858 ONECUT3O60422 494 aaPredicted RBP12.86□□□□□ -0.35
PSD3-213ENST00000520858 C6orf132Q5T0Z8 1188 aa12.83□□□□□ -0.36
PSD3-213ENST00000520858 TSR3Q9UJK0 312 aaKnown RBP12.83□□□□□ -0.36
PSD3-213ENST00000520858 HPS5Q9UPZ3 1129 aa12.83□□□□□ -0.36
PSD3-213ENST00000520858 TRIM6-TRIM34B2RNG4 842 aa12.82□□□□□ -0.36
PSD3-213ENST00000520858 FAM98CQ17RN3 349 aaKnown RBP12.82□□□□□ -0.36
PSD3-213ENST00000520858 GTPBP6O43824 516 aaPredicted RBP12.81□□□□□ -0.36
PSD3-213ENST00000520858 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.81□□□□□ -0.36
PSD3-213ENST00000520858 LRCH3Q96II8 777 aa12.78□□□□□ -0.36
PSD3-213ENST00000520858 PRKD2Q9BZL6 878 aa12.76□□□□□ -0.37
PSD3-213ENST00000520858 TJAP1Q5JTD0 557 aa12.75□□□□□ -0.37
PSD3-213ENST00000520858 NRG2O14511 850 aaPredicted RBP12.74□□□□□ -0.37
PSD3-213ENST00000520858 EPAS1Q99814 870 aa12.74□□□□□ -0.37
PSD3-213ENST00000520858 CADPS2Q86UW7 1296 aa12.72□□□□□ -0.37
PSD3-213ENST00000520858 RBM33Q96EV2 1170 aaKnown RBP12.72□□□□□ -0.37
PSD3-213ENST00000520858 TSKSQ9UJT2 592 aa12.71□□□□□ -0.37
PSD3-213ENST00000520858 PPP1R18Q6NYC8 613 aa12.68□□□□□ -0.38
PSD3-213ENST00000520858 PPP4CP60510 307 aa12.67□□□□□ -0.38
PSD3-213ENST00000520858 DPYSL4O14531 572 aa12.66□□□□□ -0.38
PSD3-213ENST00000520858 CAMK2BQ13554 666 aa12.65□□□□□ -0.38
PSD3-213ENST00000520858 MTRQ99707 1265 aa12.65□□□□□ -0.38
PSD3-213ENST00000520858 V9GY48 417 aaPredicted RBP12.65□□□□□ -0.38
PSD3-213ENST00000520858 TSR1Q2NL82 804 aaKnown RBP12.64□□□□□ -0.39
PSD3-213ENST00000520858 ZNF787Q6DD87 383 aa12.64□□□□□ -0.39
PSD3-213ENST00000520858 DDX12PQ92771 950 aa12.64□□□□□ -0.39
PSD3-213ENST00000520858 SAMD7Q7Z3H4 446 aa12.63□□□□□ -0.39
PSD3-213ENST00000520858 C3orf80F5H4A9 247 aa12.62□□□□□ -0.39
PSD3-213ENST00000520858 SMAPO00193 183 aa12.62□□□□□ -0.39
PSD3-213ENST00000520858 ZNF516Q92618 1163 aa12.62□□□□□ -0.39
PSD3-213ENST00000520858 ZNF775Q96BV0 537 aaPredicted RBP12.61□□□□□ -0.39
PSD3-213ENST00000520858 FAM198AQ9UFP1 575 aa12.61□□□□□ -0.39
PSD3-213ENST00000520858 PACS2Q86VP3 889 aa12.6□□□□□ -0.39
PSD3-213ENST00000520858 IL21Q9HBE4 155 aa12.6□□□□□ -0.39
PSD3-213ENST00000520858 EN1Q05925 392 aaPredicted RBP12.59□□□□□ -0.39
PSD3-213ENST00000520858 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.58□□□□□ -0.4
PSD3-213ENST00000520858 PDZRN3Q9UPQ7 1066 aa12.57□□□□□ -0.4
PSD3-213ENST00000520858 NKX2-3Q8TAU0 364 aa12.56□□□□□ -0.4
PSD3-213ENST00000520858 NBR1Q14596 966 aa12.54□□□□□ -0.4
PSD3-213ENST00000520858 CDCA7LQ96GN5 454 aa12.54□□□□□ -0.4
PSD3-213ENST00000520858 MAP3K7O43318 606 aa12.53□□□□□ -0.4
PSD3-213ENST00000520858 APLP1P51693 650 aa12.52□□□□□ -0.41
PSD3-213ENST00000520858 PRIM1P49642 420 aaKnown RBP12.5□□□□□ -0.41
PSD3-213ENST00000520858 PRSS12P56730 875 aa12.49□□□□□ -0.41
PSD3-213ENST00000520858 TATDN2Q93075 761 aa12.48□□□□□ -0.41
PSD3-213ENST00000520858 TRIM67Q6ZTA4 783 aa12.47□□□□□ -0.41
PSD3-213ENST00000520858 PNMA3Q9UL41 463 aa12.46□□□□□ -0.41
PSD3-213ENST00000520858 PDIA6Q15084 440 aa12.45□□□□□ -0.42
PSD3-213ENST00000520858 EMID1Q96A84 441 aaPredicted RBP12.43□□□□□ -0.42
PSD3-213ENST00000520858 RNF40O75150 1001 aa12.42□□□□□ -0.42
PSD3-213ENST00000520858 POTECB2RU33 542 aa12.41□□□□□ -0.42
PSD3-213ENST00000520858 NBPF26B4DH59 902 aa12.41□□□□□ -0.42
PSD3-213ENST00000520858 COPS2P61201 443 aa12.41□□□□□ -0.42
PSD3-213ENST00000520858 NUDT18Q6ZVK8 323 aa12.4□□□□□ -0.42
PSD3-213ENST00000520858 MYT1Q01538 1121 aa12.38□□□□□ -0.43
PSD3-213ENST00000520858 CDHR5Q9HBB8 845 aa12.38□□□□□ -0.43
PSD3-213ENST00000520858 CERKQ8TCT0 537 aa12.37□□□□□ -0.43
PSD3-213ENST00000520858 TMUB1Q9BVT8 246 aa12.37□□□□□ -0.43
PSD3-213ENST00000520858 GGCXP38435 758 aa12.36□□□□□ -0.43
PSD3-213ENST00000520858 ZPR1O75312 459 aa12.34□□□□□ -0.43
PSD3-213ENST00000520858 SWT1Q5T5J6 900 aaKnown RBP12.33□□□□□ -0.44
PSD3-213ENST00000520858 SPDYE16A6NNV3 312 aaPredicted RBP12.32□□□□□ -0.44
PSD3-213ENST00000520858 RNF223E7ERA6 249 aa12.32□□□□□ -0.44
PSD3-213ENST00000520858 SLC19A1P41440 591 aa12.31□□□□□ -0.44
PSD3-213ENST00000520858 HDGFP51858 240 aaKnown RBP12.3□□□□□ -0.44
PSD3-213ENST00000520858 PKDCCQ504Y2 493 aa12.3□□□□□ -0.44
PSD3-213ENST00000520858 LCE2AQ5TA79 106 aaPredicted RBP12.3□□□□□ -0.44
PSD3-213ENST00000520858 GRXCR2A6NFK2 248 aa12.29□□□□□ -0.44
PSD3-213ENST00000520858 DGAT1O75907 488 aa12.29□□□□□ -0.44
PSD3-213ENST00000520858 TTC13Q8NBP0 860 aa12.29□□□□□ -0.44
PSD3-213ENST00000520858 RBM27Q9P2N5 1060 aaKnown RBP12.29□□□□□ -0.44
PSD3-213ENST00000520858 SPRYD7Q5W111 196 aa12.28□□□□□ -0.44
PSD3-213ENST00000520858 OSBPP22059 807 aa12.27□□□□□ -0.45
PSD3-213ENST00000520858 PRR20EP86478 221 aa12.27□□□□□ -0.45
PSD3-213ENST00000520858 PRR20CP86479 221 aa12.27□□□□□ -0.45
PSD3-213ENST00000520858 PRR20DP86480 221 aa12.27□□□□□ -0.45
PSD3-213ENST00000520858 PRR20BP86481 221 aa12.27□□□□□ -0.45
PSD3-213ENST00000520858 PRR20AP86496 221 aa12.27□□□□□ -0.45
PSD3-213ENST00000520858 SLF2Q8IX21 1173 aa12.26□□□□□ -0.45
PSD3-213ENST00000520858 ZNF598Q86UK7 904 aaKnown RBP12.25□□□□□ -0.45
PSD3-213ENST00000520858 TLL1O43897 1013 aa12.24□□□□□ -0.45
PSD3-213ENST00000520858 NPDC1Q9NQX5 325 aaPredicted RBP12.24□□□□□ -0.45
PSD3-213ENST00000520858 PPEF1O14829 653 aaPredicted RBP12.23□□□□□ -0.45
PSD3-213ENST00000520858 BLOC1S3Q6QNY0 202 aa12.23□□□□□ -0.45
PSD3-213ENST00000520858 PADI6Q6TGC4 694 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms