RNA–Protein interactions for RNA: ENST00000520724.5

RUNX1T1-227, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 2 BASIC

Gene RUNX1T1, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-227ENST00000520724 CCNB3Q8WWL7 1395 aa16.31■□□□□ 0.2
RUNX1T1-227ENST00000520724 SUPT6HQ7KZ85 1726 aaKnown RBP16.3■□□□□ 0.2
RUNX1T1-227ENST00000520724 SOCS7O14512 581 aa16.3■□□□□ 0.2
RUNX1T1-227ENST00000520724 A2MP01023 1474 aa16.3■□□□□ 0.2
RUNX1T1-227ENST00000520724 CCDC136Q96JN2 1154 aa16.3■□□□□ 0.2
RUNX1T1-227ENST00000520724 ATP7AQ04656 1500 aa16.29■□□□□ 0.2
RUNX1T1-227ENST00000520724 PTPRKQ15262 1439 aa16.29■□□□□ 0.2
RUNX1T1-227ENST00000520724 MTUS2Q5JR59 1369 aa16.27■□□□□ 0.2
RUNX1T1-227ENST00000520724 SUPT16HQ9Y5B9 1047 aaKnown RBP16.27■□□□□ 0.2
RUNX1T1-227ENST00000520724 PLXNC1O60486 1568 aa16.27■□□□□ 0.19
RUNX1T1-227ENST00000520724 NEFLP07196 543 aa16.27■□□□□ 0.19
RUNX1T1-227ENST00000520724 MROH2AA6NES4 1674 aa16.25■□□□□ 0.19
RUNX1T1-227ENST00000520724 CLTCQ00610 1675 aaKnown RBP16.25■□□□□ 0.19
RUNX1T1-227ENST00000520724 PLEKHH2Q8IVE3 1493 aa16.25■□□□□ 0.19
RUNX1T1-227ENST00000520724 MBD5Q9P267 1494 aa16.25■□□□□ 0.19
RUNX1T1-227ENST00000520724 UBAP1LF5GYI3 381 aa16.25■□□□□ 0.19
RUNX1T1-227ENST00000520724 PKD2Q13563 968 aa16.25■□□□□ 0.19
RUNX1T1-227ENST00000520724 INO80Q9ULG1 1556 aaPredicted RBP16.25■□□□□ 0.19
RUNX1T1-227ENST00000520724 FBXO31Q5XUX0 539 aaPredicted RBP16.24■□□□□ 0.19
RUNX1T1-227ENST00000520724 IQSEC2Q5JU85 1478 aa16.24■□□□□ 0.19
RUNX1T1-227ENST00000520724 PPP6R1Q9UPN7 881 aa16.23■□□□□ 0.19
RUNX1T1-227ENST00000520724 TCOF1Q13428 1488 aaKnown RBP16.22■□□□□ 0.19
RUNX1T1-227ENST00000520724 KLHL34Q8N239 644 aa16.22■□□□□ 0.19
RUNX1T1-227ENST00000520724 PLA2R1Q13018 1463 aa16.21■□□□□ 0.19
RUNX1T1-227ENST00000520724 DHX29Q7Z478 1369 aaKnown RBP16.21■□□□□ 0.19
RUNX1T1-227ENST00000520724 CEP170BQ9Y4F5 1589 aaPredicted RBP16.2■□□□□ 0.18
RUNX1T1-227ENST00000520724 KIF3BO15066 747 aa16.2■□□□□ 0.18
RUNX1T1-227ENST00000520724 DEKP35659 375 aaKnown RBP16.2■□□□□ 0.18
RUNX1T1-227ENST00000520724 MYO3AQ8NEV4 1616 aa16.2■□□□□ 0.18
RUNX1T1-227ENST00000520724 SPATA31D1Q6ZQQ2 1576 aa16.2■□□□□ 0.18
RUNX1T1-227ENST00000520724 TIAM1Q13009 1591 aa16.19■□□□□ 0.18
RUNX1T1-227ENST00000520724 RTN4Q9NQC3 1192 aaKnown RBP16.17■□□□□ 0.18
RUNX1T1-227ENST00000520724 RTEL1-TNFRSF6BF6WH68 1400 aa16.17■□□□□ 0.18
RUNX1T1-227ENST00000520724 ZNF142P52746 1687 aaPredicted RBP16.16■□□□□ 0.18
RUNX1T1-227ENST00000520724 CEP162Q5TB80 1403 aa16.16■□□□□ 0.18
RUNX1T1-227ENST00000520724 A2ML1A8K2U0 1454 aa16.16■□□□□ 0.18
RUNX1T1-227ENST00000520724 WASHC2CQ9Y4E1 1318 aa16.14■□□□□ 0.17
RUNX1T1-227ENST00000520724 DNMT1P26358 1616 aaKnown RBP16.14■□□□□ 0.17
RUNX1T1-227ENST00000520724 ADGBQ8N7X0 1667 aa16.14■□□□□ 0.17
RUNX1T1-227ENST00000520724 TNRQ92752 1358 aa16.13■□□□□ 0.17
RUNX1T1-227ENST00000520724 PIP4K2BP78356 416 aa16.13■□□□□ 0.17
RUNX1T1-227ENST00000520724 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.12■□□□□ 0.17
RUNX1T1-227ENST00000520724 EHBP1L1Q8N3D4 1523 aa16.12■□□□□ 0.17
RUNX1T1-227ENST00000520724 HSPA1LP34931 641 aa16.12■□□□□ 0.17
RUNX1T1-227ENST00000520724 NCOA2Q15596 1464 aa16.1■□□□□ 0.17
RUNX1T1-227ENST00000520724 RSPH4AQ5TD94 716 aa16.1■□□□□ 0.17
RUNX1T1-227ENST00000520724 ANKLE2Q86XL3 938 aa16.1■□□□□ 0.17
RUNX1T1-227ENST00000520724 TIMELESSQ9UNS1 1208 aa16.1■□□□□ 0.17
RUNX1T1-227ENST00000520724 PZPP20742 1482 aa16.09■□□□□ 0.17
RUNX1T1-227ENST00000520724 CCDC141Q6ZP82 1450 aa16.09■□□□□ 0.17
RUNX1T1-227ENST00000520724 MIA2Q96PC5 1412 aa16.09■□□□□ 0.17
RUNX1T1-227ENST00000520724 CAMSAP2Q08AD1 1489 aa16.09■□□□□ 0.17
RUNX1T1-227ENST00000520724 NEURL4Q96JN8 1562 aa16.08■□□□□ 0.17
RUNX1T1-227ENST00000520724 TSPY4P0CV99 314 aa16.07■□□□□ 0.16
RUNX1T1-227ENST00000520724 TSPY10P0CW01 314 aa16.07■□□□□ 0.16
RUNX1T1-227ENST00000520724 PDIA4P13667 645 aaKnown RBP16.07■□□□□ 0.16
RUNX1T1-227ENST00000520724 THEMISQ8N1K5 641 aaPredicted RBP16.07■□□□□ 0.16
RUNX1T1-227ENST00000520724 SHANK2Q9UPX8 1470 aa16.07■□□□□ 0.16
RUNX1T1-227ENST00000520724 TOM1O60784 492 aa16.07■□□□□ 0.16
RUNX1T1-227ENST00000520724 PDE4CQ08493 712 aa16.07■□□□□ 0.16
RUNX1T1-227ENST00000520724 KDM5DQ9BY66 1539 aa16.06■□□□□ 0.16
RUNX1T1-227ENST00000520724 RBM19Q9Y4C8 960 aaKnown RBP16.06■□□□□ 0.16
RUNX1T1-227ENST00000520724 MSH5O43196 834 aa16.03■□□□□ 0.16
RUNX1T1-227ENST00000520724 LOC105371045A0A1W2PR82 267 aa16.03■□□□□ 0.16
RUNX1T1-227ENST00000520724 KANK4Q5T7N3 995 aaPredicted RBP16.03■□□□□ 0.16
RUNX1T1-227ENST00000520724 UGGT1Q9NYU2 1555 aa16.02■□□□□ 0.15
RUNX1T1-227ENST00000520724 CPS1P31327 1500 aa16.02■□□□□ 0.15
RUNX1T1-227ENST00000520724 NPHP4O75161 1426 aaPredicted RBP16.01■□□□□ 0.15
RUNX1T1-227ENST00000520724 VWDEQ8N2E2 1590 aa16.01■□□□□ 0.15
RUNX1T1-227ENST00000520724 YTHDC1Q96MU7 727 aaKnown RBP16.01■□□□□ 0.15
RUNX1T1-227ENST00000520724 NLRP1Q9C000 1473 aa16.01■□□□□ 0.15
RUNX1T1-227ENST00000520724 SENP3Q9H4L4 574 aaPredicted RBP16■□□□□ 0.15
RUNX1T1-227ENST00000520724 ZBTB4Q9P1Z0 1013 aaPredicted RBP16■□□□□ 0.15
RUNX1T1-227ENST00000520724 MED14O60244 1454 aa16■□□□□ 0.15
RUNX1T1-227ENST00000520724 POLR1AO95602 1720 aaPredicted RBP16■□□□□ 0.15
RUNX1T1-227ENST00000520724 FAM135AQ9P2D6 1515 aa15.99■□□□□ 0.15
RUNX1T1-227ENST00000520724 ALKQ9UM73 1620 aa15.99■□□□□ 0.15
RUNX1T1-227ENST00000520724 FANCIQ9NVI1 1328 aa15.99■□□□□ 0.15
RUNX1T1-227ENST00000520724 ARHGEF5Q12774 1597 aa15.98■□□□□ 0.15
RUNX1T1-227ENST00000520724 FGD1P98174 961 aa15.98■□□□□ 0.15
RUNX1T1-227ENST00000520724 LRRC9Q6ZRR7 1453 aa15.97■□□□□ 0.15
RUNX1T1-227ENST00000520724 GLIPR1L2Q4G1C9 344 aa15.97■□□□□ 0.15
RUNX1T1-227ENST00000520724 ABCC3O15438 1527 aa15.97■□□□□ 0.15
RUNX1T1-227ENST00000520724 MED1Q15648 1581 aaPredicted RBP15.96■□□□□ 0.15
RUNX1T1-227ENST00000520724 LTKP29376 864 aa15.95■□□□□ 0.14
RUNX1T1-227ENST00000520724 DEPDC5O75140 1603 aa15.94■□□□□ 0.14
RUNX1T1-227ENST00000520724 ERVK-7P63135 1459 aa15.94■□□□□ 0.14
RUNX1T1-227ENST00000520724 LRRC7Q96NW7 1537 aa15.94■□□□□ 0.14
RUNX1T1-227ENST00000520724 VPS8Q8N3P4 1428 aa15.93■□□□□ 0.14
RUNX1T1-227ENST00000520724 RNF17Q9BXT8 1623 aaKnown RBP15.92■□□□□ 0.14
RUNX1T1-227ENST00000520724 STRCP1A6NGW2 1772 aa15.92■□□□□ 0.14
RUNX1T1-227ENST00000520724 IQGAP1P46940 1657 aa15.91■□□□□ 0.14
RUNX1T1-227ENST00000520724 TXNDC2Q86VQ3 553 aa15.91■□□□□ 0.14
RUNX1T1-227ENST00000520724 MROH1Q8NDA8 1641 aa15.91■□□□□ 0.14
RUNX1T1-227ENST00000520724 RRP7BPQ9NSQ0 103 aa15.91■□□□□ 0.14
RUNX1T1-227ENST00000520724 MAST1Q9Y2H9 1570 aa15.9■□□□□ 0.14
RUNX1T1-227ENST00000520724 PHF23Q9BUL5 403 aaPredicted RBP15.89■□□□□ 0.13
RUNX1T1-227ENST00000520724 MYOM3Q5VTT5 1437 aa15.89■□□□□ 0.13
RUNX1T1-227ENST00000520724 CFAP65Q6ZU64 1925 aaKnown RBP15.89■□□□□ 0.13
RUNX1T1-227ENST00000520724 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms