RNA–Protein interactions for RNA: ENST00000520348.5

SNHG6-201, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2 BASIC

Gene SNHG6, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-201ENST00000520348 VWDEQ8N2E2 1590 aa23.37■■□□□ 1.33
SNHG6-201ENST00000520348 DHX29Q7Z478 1369 aaKnown RBP23.37■■□□□ 1.33
SNHG6-201ENST00000520348 ABCA6Q8N139 1617 aa23.35■■□□□ 1.33
SNHG6-201ENST00000520348 RPRD2Q5VT52 1461 aaKnown RBP23.35■■□□□ 1.33
SNHG6-201ENST00000520348 PRDM15P57071 1507 aaPredicted RBP23.34■■□□□ 1.33
SNHG6-201ENST00000520348 MROH1Q8NDA8 1641 aa23.33■■□□□ 1.33
SNHG6-201ENST00000520348 RNF17Q9BXT8 1623 aaKnown RBP23.33■■□□□ 1.32
SNHG6-201ENST00000520348 DIP2CQ9Y2E4 1556 aa23.32■■□□□ 1.32
SNHG6-201ENST00000520348 A2MP01023 1474 aa23.32■■□□□ 1.32
SNHG6-201ENST00000520348 PKD2Q13563 968 aa23.28■■□□□ 1.32
SNHG6-201ENST00000520348 TSPOAP1O95153 1857 aa23.28■■□□□ 1.32
SNHG6-201ENST00000520348 ATP10AO60312 1499 aa23.27■■□□□ 1.32
SNHG6-201ENST00000520348 NEUROD1Q13562 356 aa23.26■■□□□ 1.31
SNHG6-201ENST00000520348 TONSLQ96HA7 1378 aa23.26■■□□□ 1.31
SNHG6-201ENST00000520348 FOXD1Q16676 465 aa23.25■■□□□ 1.31
SNHG6-201ENST00000520348 TET3O43151 1660 aa23.25■■□□□ 1.31
SNHG6-201ENST00000520348 LMTK2Q8IWU2 1503 aa23.24■■□□□ 1.31
SNHG6-201ENST00000520348 REREQ9P2R6 1566 aa23.24■■□□□ 1.31
SNHG6-201ENST00000520348 RAPGEF3O95398 923 aa23.23■■□□□ 1.31
SNHG6-201ENST00000520348 PPP1R15AO75807 674 aaPredicted RBP23.22■■□□□ 1.31
SNHG6-201ENST00000520348 PLA2R1Q13018 1463 aa23.2■■□□□ 1.3
SNHG6-201ENST00000520348 DNAJC5Q9H3Z4 198 aa23.2■■□□□ 1.3
SNHG6-201ENST00000520348 YEATS2Q9ULM3 1422 aa23.19■■□□□ 1.3
SNHG6-201ENST00000520348 E9PCH4 1651 aa23.19■■□□□ 1.3
SNHG6-201ENST00000520348 COL17A1Q9UMD9 1497 aaPredicted RBP23.17■■□□□ 1.3
SNHG6-201ENST00000520348 KANK1Q14678 1352 aa23.15■■□□□ 1.3
SNHG6-201ENST00000520348 EFCAB6Q5THR3 1501 aa23.15■■□□□ 1.3
SNHG6-201ENST00000520348 PTPRTO14522 1441 aa23.15■■□□□ 1.3
SNHG6-201ENST00000520348 KIF3BO15066 747 aa23.14■■□□□ 1.29
SNHG6-201ENST00000520348 MYT1LQ9UL68 1186 aa23.14■■□□□ 1.29
SNHG6-201ENST00000520348 AGLP35573 1532 aa23.13■■□□□ 1.29
SNHG6-201ENST00000520348 ARHGEF40Q8TER5 1519 aa23.13■■□□□ 1.29
SNHG6-201ENST00000520348 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.13■■□□□ 1.298e-25■□□□□ 9.7
SNHG6-201ENST00000520348 TRPM2O94759 1503 aa23.13■■□□□ 1.29
SNHG6-201ENST00000520348 ZNF316A6NFI3 1004 aaPredicted RBP23.11■■□□□ 1.29
SNHG6-201ENST00000520348 SPHKAPQ2M3C7 1700 aa23.1■■□□□ 1.29
SNHG6-201ENST00000520348 ZC3H13Q5T200 1668 aaKnown RBP23.09■■□□□ 1.29
SNHG6-201ENST00000520348 ABCC3O15438 1527 aa23.09■■□□□ 1.29
SNHG6-201ENST00000520348 L3MBTL2Q969R5 705 aa23.09■■□□□ 1.29
SNHG6-201ENST00000520348 CEP152O94986 1710 aa23.08■■□□□ 1.28
SNHG6-201ENST00000520348 CCDC144AA2RUR9 1427 aa23.08■■□□□ 1.28
SNHG6-201ENST00000520348 NEURL4Q96JN8 1562 aa23.06■■□□□ 1.28
SNHG6-201ENST00000520348 UHRF1BP1Q6BDS2 1440 aa23.04■■□□□ 1.28
SNHG6-201ENST00000520348 CAMSAP1Q5T5Y3 1602 aa23.02■■□□□ 1.28
SNHG6-201ENST00000520348 ARHGAP31Q2M1Z3 1444 aa23■■□□□ 1.27
SNHG6-201ENST00000520348 CLTCL1P53675 1640 aa23■■□□□ 1.27
SNHG6-201ENST00000520348 SPATA31E1Q6ZUB1 1445 aa22.99■■□□□ 1.27
SNHG6-201ENST00000520348 SIGLEC1Q9BZZ2 1709 aa22.99■■□□□ 1.27
SNHG6-201ENST00000520348 NPATQ14207 1427 aa22.99■■□□□ 1.27
SNHG6-201ENST00000520348 NOS1P29475 1434 aa22.93■■□□□ 1.26
SNHG6-201ENST00000520348 CNTLNQ9NXG0 1405 aa22.93■■□□□ 1.26
SNHG6-201ENST00000520348 PPP6R1Q9UPN7 881 aa22.93■■□□□ 1.26
SNHG6-201ENST00000520348 RALGAPBQ86X10 1494 aa22.92■■□□□ 1.26
SNHG6-201ENST00000520348 NBPF8Q3BBV2 869 aa22.92■■□□□ 1.26
SNHG6-201ENST00000520348 GGT6Q6P531 493 aa22.91■■□□□ 1.26
SNHG6-201ENST00000520348 PIK3C2BO00750 1634 aa22.9■■□□□ 1.26
SNHG6-201ENST00000520348 WASHC2CQ9Y4E1 1318 aa22.88■■□□□ 1.25
SNHG6-201ENST00000520348 ADGRB3O60242 1522 aa22.87■■□□□ 1.25
SNHG6-201ENST00000520348 PRAG1Q86YV5 1406 aa22.87■■□□□ 1.25
SNHG6-201ENST00000520348 SYNMO15061 1565 aa22.86■■□□□ 1.25
SNHG6-201ENST00000520348 UGGT1Q9NYU2 1555 aa22.85■■□□□ 1.25
SNHG6-201ENST00000520348 TRPM1Q7Z4N2 1603 aa22.84■■□□□ 1.25
SNHG6-201ENST00000520348 KIF1BO60333 1816 aa22.83■■□□□ 1.25
SNHG6-201ENST00000520348 PREX1Q8TCU6 1659 aa22.83■■□□□ 1.24
SNHG6-201ENST00000520348 STAC3Q96MF2 364 aa22.82■■□□□ 1.24
SNHG6-201ENST00000520348 IFT172Q9UG01 1749 aa22.82■■□□□ 1.24
SNHG6-201ENST00000520348 LAMC1P11047 1609 aa22.82■■□□□ 1.24
SNHG6-201ENST00000520348 MROH2AA6NES4 1674 aa22.81■■□□□ 1.24
SNHG6-201ENST00000520348 MADDQ8WXG6 1647 aa22.81■■□□□ 1.24
SNHG6-201ENST00000520348 MYOM2P54296 1465 aa22.8■■□□□ 1.24
SNHG6-201ENST00000520348 TRHP20396 242 aaPredicted RBP22.8■■□□□ 1.24
SNHG6-201ENST00000520348 CLTCQ00610 1675 aaKnown RBP22.8■■□□□ 1.24
SNHG6-201ENST00000520348 GPRASP1Q5JY77 1395 aa22.79■■□□□ 1.24
SNHG6-201ENST00000520348 DIEXFQ68CQ4 756 aaKnown RBP22.79■■□□□ 1.24
SNHG6-201ENST00000520348 DCAF11Q8TEB1 546 aa22.78■■□□□ 1.24
SNHG6-201ENST00000520348 ERVK-7P63135 1459 aa22.78■■□□□ 1.24
SNHG6-201ENST00000520348 SPATA31D1Q6ZQQ2 1576 aa22.77■■□□□ 1.24
SNHG6-201ENST00000520348 NRXN1Q9ULB1 1477 aa22.75■■□□□ 1.23
SNHG6-201ENST00000520348 EIF4G2P78344 907 aaKnown RBP eCLIP22.74■■□□□ 1.23
SNHG6-201ENST00000520348 KIAA1210Q9ULL0 1709 aa22.74■■□□□ 1.23
SNHG6-201ENST00000520348 HSPA5P11021 654 aaKnown RBP22.72■■□□□ 1.23
SNHG6-201ENST00000520348 RGL3Q3MIN7 710 aa22.72■■□□□ 1.23
SNHG6-201ENST00000520348 PPLO60437 1756 aa22.7■■□□□ 1.22
SNHG6-201ENST00000520348 SLC52A1Q9NWF4 448 aa22.69■■□□□ 1.22
SNHG6-201ENST00000520348 POLR1AO95602 1720 aaPredicted RBP22.68■■□□□ 1.22
SNHG6-201ENST00000520348 USP47Q96K76 1375 aa22.68■■□□□ 1.22
SNHG6-201ENST00000520348 KDM2AQ9Y2K7 1162 aa22.68■■□□□ 1.22
SNHG6-201ENST00000520348 CFAP65Q6ZU64 1925 aaKnown RBP22.68■■□□□ 1.22
SNHG6-201ENST00000520348 TMEM131LA2VDJ0 1609 aa22.67■■□□□ 1.22
SNHG6-201ENST00000520348 RPGRIP1LQ68CZ1 1315 aa22.66■■□□□ 1.22
SNHG6-201ENST00000520348 NEXMIFQ5QGS0 1516 aa22.66■■□□□ 1.22
SNHG6-201ENST00000520348 ROCK2O75116 1388 aaKnown RBP22.65■■□□□ 1.22
SNHG6-201ENST00000520348 ZNF326Q5BKZ1 582 aaKnown RBP22.65■■□□□ 1.22
SNHG6-201ENST00000520348 IQGAP1P46940 1657 aa22.62■■□□□ 1.21
SNHG6-201ENST00000520348 ZFYVE9O95405 1425 aa22.62■■□□□ 1.21
SNHG6-201ENST00000520348 ZMYM3Q14202 1370 aa22.62■■□□□ 1.21
SNHG6-201ENST00000520348 CARD11Q9BXL7 1154 aa22.61■■□□□ 1.21
SNHG6-201ENST00000520348 IDI1Q13907 227 aa22.6■■□□□ 1.21
SNHG6-201ENST00000520348 HIRIP3Q9BW71 556 aaPredicted RBP22.6■■□□□ 1.21
SNHG6-201ENST00000520348 PIK3C2GO75747 1445 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms