RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 MAGI2Q86UL8 1455 aa35.64■■■■□ 3.3
COL13A1-213ENST00000520267 ARAP3Q8WWN8 1544 aa35.63■■■■□ 3.29
COL13A1-213ENST00000520267 CCDC184Q52MB2 194 aa35.62■■■■□ 3.29
COL13A1-213ENST00000520267 CARD11Q9BXL7 1154 aa35.62■■■■□ 3.29
COL13A1-213ENST00000520267 WDR7Q9Y4E6 1490 aa35.62■■■■□ 3.29
COL13A1-213ENST00000520267 HNRNPUQ00839 825 aaKnown RBP eCLIP35.54■■■■□ 3.28
COL13A1-213ENST00000520267 SPAG9O60271 1321 aaKnown RBP35.53■■■■□ 3.28
COL13A1-213ENST00000520267 ARID4BQ4LE39 1312 aaPredicted RBP35.53■■■■□ 3.28
COL13A1-213ENST00000520267 AFAP1Q8N556 730 aa35.53■■■■□ 3.28
COL13A1-213ENST00000520267 POLR3GLQ9BT43 218 aa35.52■■■■□ 3.28
COL13A1-213ENST00000520267 TRPM1Q7Z4N2 1603 aa35.51■■■■□ 3.28
COL13A1-213ENST00000520267 ABCA9Q8IUA7 1624 aa35.51■■■■□ 3.27
COL13A1-213ENST00000520267 ZFYVE16Q7Z3T8 1539 aa35.51■■■■□ 3.27
COL13A1-213ENST00000520267 RTEL1-TNFRSF6BF6WH68 1400 aa35.51■■■■□ 3.27
COL13A1-213ENST00000520267 DHX29Q7Z478 1369 aaKnown RBP35.5■■■■□ 3.27
COL13A1-213ENST00000520267 RGL3Q3MIN7 710 aa35.5■■■■□ 3.27
COL13A1-213ENST00000520267 PRAG1Q86YV5 1406 aa35.5■■■■□ 3.27
COL13A1-213ENST00000520267 A2MP01023 1474 aa35.49■■■■□ 3.27
COL13A1-213ENST00000520267 ROCK2O75116 1388 aaKnown RBP35.48■■■■□ 3.27
COL13A1-213ENST00000520267 ATP10AO60312 1499 aa35.48■■■■□ 3.27
COL13A1-213ENST00000520267 ST20-MTHFSA0A0A6YYL1 179 aa35.47■■■■□ 3.27
COL13A1-213ENST00000520267 FANCAO15360 1455 aa35.47■■■■□ 3.27
COL13A1-213ENST00000520267 FKBP8Q14318 412 aa35.45■■■■□ 3.27
COL13A1-213ENST00000520267 MRS2Q9HD23 443 aa35.45■■■■□ 3.27
COL13A1-213ENST00000520267 ASXL2Q76L83 1435 aa35.42■■■■□ 3.26
COL13A1-213ENST00000520267 INO80Q9ULG1 1556 aaPredicted RBP35.39■■■■□ 3.26
COL13A1-213ENST00000520267 E9PCH4 1651 aa35.38■■■■□ 3.25
COL13A1-213ENST00000520267 FAM9BQ8IZU0 186 aa35.38■■■■□ 3.25
COL13A1-213ENST00000520267 ATP7AQ04656 1500 aa35.37■■■■□ 3.25
COL13A1-213ENST00000520267 NBPF1Q3BBV0 1214 aa35.36■■■■□ 3.25
COL13A1-213ENST00000520267 DEPDC5O75140 1603 aa35.35■■■■□ 3.25
COL13A1-213ENST00000520267 ADGRL1O94910 1474 aa35.34■■■■□ 3.25
COL13A1-213ENST00000520267 OSCARQ8IYS5 282 aa35.34■■■■□ 3.25
COL13A1-213ENST00000520267 BCANQ96GW7 911 aa35.33■■■■□ 3.25
COL13A1-213ENST00000520267 GPRASP1Q5JY77 1395 aa35.32■■■■□ 3.25
COL13A1-213ENST00000520267 SCAPERQ9BY12 1400 aa35.32■■■■□ 3.24
COL13A1-213ENST00000520267 NEFLP07196 543 aa35.32■■■■□ 3.24
COL13A1-213ENST00000520267 CNGB1Q14028 1251 aaPredicted RBP35.31■■■■□ 3.24
COL13A1-213ENST00000520267 LAMC1P11047 1609 aa35.3■■■■□ 3.24
COL13A1-213ENST00000520267 EIF2AK4Q9P2K8 1649 aaKnown RBP35.29■■■■□ 3.24
COL13A1-213ENST00000520267 PRDM15P57071 1507 aaPredicted RBP35.26■■■■□ 3.24
COL13A1-213ENST00000520267 SPHKAPQ2M3C7 1700 aa35.24■■■■□ 3.23
COL13A1-213ENST00000520267 TRPM2O94759 1503 aa35.24■■■■□ 3.23
COL13A1-213ENST00000520267 TET3O43151 1660 aa35.23■■■■□ 3.23
COL13A1-213ENST00000520267 MYT1LQ9UL68 1186 aa35.23■■■■□ 3.23
COL13A1-213ENST00000520267 VWDEQ8N2E2 1590 aa35.22■■■■□ 3.23
COL13A1-213ENST00000520267 PTPRTO14522 1441 aa35.2■■■■□ 3.23
COL13A1-213ENST00000520267 CEP152O94986 1710 aa35.2■■■■□ 3.23
COL13A1-213ENST00000520267 NPM1P06748 294 aaKnown RBP eCLIP35.19■■■■□ 3.22
COL13A1-213ENST00000520267 KIF3BO15066 747 aa35.18■■■■□ 3.22
COL13A1-213ENST00000520267 CLTCL1P53675 1640 aa35.17■■■■□ 3.22
COL13A1-213ENST00000520267 KANK1Q14678 1352 aa35.17■■■■□ 3.22
COL13A1-213ENST00000520267 ZBED9Q6R2W3 1325 aa35.16■■■■□ 3.22
COL13A1-213ENST00000520267 KIDINS220Q9ULH0 1771 aa35.16■■■■□ 3.22
COL13A1-213ENST00000520267 RNF17Q9BXT8 1623 aaKnown RBP35.16■■■■□ 3.22
COL13A1-213ENST00000520267 MROH1Q8NDA8 1641 aa35.15■■■■□ 3.22
COL13A1-213ENST00000520267 MADDQ8WXG6 1647 aa35.13■■■■□ 3.21
COL13A1-213ENST00000520267 TESK2Q96S53 571 aa35.12■■■■□ 3.21
COL13A1-213ENST00000520267 COL17A1Q9UMD9 1497 aaPredicted RBP35.11■■■■□ 3.21
COL13A1-213ENST00000520267 DISP3Q9P2K9 1392 aa35.08■■■■□ 3.21
COL13A1-213ENST00000520267 ZNF518AQ6AHZ1 1483 aa35.07■■■■□ 3.21
COL13A1-213ENST00000520267 CD109Q6YHK3 1445 aa35.06■■■■□ 3.2
COL13A1-213ENST00000520267 KTN1Q86UP2 1357 aaKnown RBP35.03■■■■□ 3.2
COL13A1-213ENST00000520267 CFAP74Q9C0B2 1584 aa35.02■■■■□ 3.2
COL13A1-213ENST00000520267 RALBP1Q15311 655 aa35.02■■■■□ 3.2
COL13A1-213ENST00000520267 PNISRQ8TF01 805 aaKnown RBP35.02■■■■□ 3.2
COL13A1-213ENST00000520267 TMC1Q8TDI8 760 aa35.01■■■■□ 3.2
COL13A1-213ENST00000520267 MYBBP1AQ9BQG0 1328 aaKnown RBP35■■■■□ 3.19
COL13A1-213ENST00000520267 IQGAP1P46940 1657 aa34.99■■■■□ 3.19
COL13A1-213ENST00000520267 EFCAB6Q5THR3 1501 aa34.97■■■■□ 3.19
COL13A1-213ENST00000520267 PER1O15534 1290 aaPredicted RBP34.97■■■■□ 3.19
COL13A1-213ENST00000520267 TMF1P82094 1093 aa34.97■■■■□ 3.19
COL13A1-213ENST00000520267 POGZQ7Z3K3 1410 aa34.97■■■■□ 3.19
COL13A1-213ENST00000520267 STAC3Q96MF2 364 aa34.97■■■■□ 3.19
COL13A1-213ENST00000520267 TSHZ2Q9NRE2 1034 aa34.97■■■■□ 3.19
COL13A1-213ENST00000520267 IRX6P78412 446 aaPredicted RBP34.96■■■■□ 3.19
COL13A1-213ENST00000520267 BRD4O60885 1362 aaPredicted RBP34.95■■■■□ 3.19
COL13A1-213ENST00000520267 UGGT1Q9NYU2 1555 aa34.95■■■■□ 3.19
COL13A1-213ENST00000520267 PPRC1Q5VV67 1664 aaKnown RBP34.95■■■■□ 3.19
COL13A1-213ENST00000520267 NEURL4Q96JN8 1562 aa34.93■■■■□ 3.18
COL13A1-213ENST00000520267 PARD3Q8TEW0 1356 aa34.92■■■■□ 3.18
COL13A1-213ENST00000520267 LMTK2Q8IWU2 1503 aa34.9■■■■□ 3.18
COL13A1-213ENST00000520267 MLH3Q9UHC1 1453 aa34.9■■■■□ 3.18
COL13A1-213ENST00000520267 KIF1BO60333 1816 aa34.89■■■■□ 3.18
COL13A1-213ENST00000520267 FRMPD1Q5SYB0 1578 aa34.88■■■■□ 3.17
COL13A1-213ENST00000520267 LRPPRCP42704 1394 aaKnown RBP34.88■■■■□ 3.17
COL13A1-213ENST00000520267 HECW2Q9P2P5 1572 aa34.88■■■■□ 3.17
COL13A1-213ENST00000520267 SCAF11Q99590 1463 aaKnown RBP34.87■■■■□ 3.17
COL13A1-213ENST00000520267 PANK3Q9H999 370 aa34.86■■■■□ 3.17
COL13A1-213ENST00000520267 KIAA1210Q9ULL0 1709 aa34.86■■■■□ 3.17
COL13A1-213ENST00000520267 MROH2AA6NES4 1674 aa34.83■■■■□ 3.17
COL13A1-213ENST00000520267 SMG6Q86US8 1419 aaKnown RBP34.83■■■■□ 3.17
COL13A1-213ENST00000520267 MAP3K4Q9Y6R4 1608 aa34.82■■■■□ 3.16
COL13A1-213ENST00000520267 WASHC2CQ9Y4E1 1318 aa34.82■■■■□ 3.16
COL13A1-213ENST00000520267 ABCA6Q8N139 1617 aa34.81■■■■□ 3.16
COL13A1-213ENST00000520267 NLRP13Q86W25 1043 aa34.81■■■■□ 3.16
COL13A1-213ENST00000520267 IFT172Q9UG01 1749 aa34.81■■■■□ 3.16
COL13A1-213ENST00000520267 MYOM2P54296 1465 aa34.8■■■■□ 3.16
COL13A1-213ENST00000520267 SENP3-EIF4A1A0A087X0R7 540 aa34.8■■■■□ 3.16
COL13A1-213ENST00000520267 CC2D1BQ5T0F9 858 aaKnown RBP34.78■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms