RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 MAGI2Q86UL8 1455 aa35.64■■■■□ 3.3
COL13A1-213ENST00000520267 ARAP3Q8WWN8 1544 aa35.63■■■■□ 3.29
COL13A1-213ENST00000520267 CCDC184Q52MB2 194 aa35.62■■■■□ 3.29
COL13A1-213ENST00000520267 CARD11Q9BXL7 1154 aa35.62■■■■□ 3.29
COL13A1-213ENST00000520267 WDR7Q9Y4E6 1490 aa35.62■■■■□ 3.29
COL13A1-213ENST00000520267 HNRNPUQ00839 825 aaKnown RBP eCLIP35.54■■■■□ 3.28
COL13A1-213ENST00000520267 SPAG9O60271 1321 aaKnown RBP35.53■■■■□ 3.28
COL13A1-213ENST00000520267 ARID4BQ4LE39 1312 aaPredicted RBP35.53■■■■□ 3.28
COL13A1-213ENST00000520267 AFAP1Q8N556 730 aa35.53■■■■□ 3.28
COL13A1-213ENST00000520267 POLR3GLQ9BT43 218 aa35.52■■■■□ 3.28
COL13A1-213ENST00000520267 TRPM1Q7Z4N2 1603 aa35.51■■■■□ 3.28
COL13A1-213ENST00000520267 ABCA9Q8IUA7 1624 aa35.51■■■■□ 3.27
COL13A1-213ENST00000520267 ZFYVE16Q7Z3T8 1539 aa35.51■■■■□ 3.27
COL13A1-213ENST00000520267 RTEL1-TNFRSF6BF6WH68 1400 aa35.51■■■■□ 3.27
COL13A1-213ENST00000520267 DHX29Q7Z478 1369 aaKnown RBP35.5■■■■□ 3.27
COL13A1-213ENST00000520267 RGL3Q3MIN7 710 aa35.5■■■■□ 3.27
COL13A1-213ENST00000520267 PRAG1Q86YV5 1406 aa35.5■■■■□ 3.27
COL13A1-213ENST00000520267 A2MP01023 1474 aa35.49■■■■□ 3.27
COL13A1-213ENST00000520267 ROCK2O75116 1388 aaKnown RBP35.48■■■■□ 3.27
COL13A1-213ENST00000520267 ATP10AO60312 1499 aa35.48■■■■□ 3.27
COL13A1-213ENST00000520267 ST20-MTHFSA0A0A6YYL1 179 aa35.47■■■■□ 3.27
COL13A1-213ENST00000520267 FANCAO15360 1455 aa35.47■■■■□ 3.27
COL13A1-213ENST00000520267 FKBP8Q14318 412 aa35.45■■■■□ 3.27
COL13A1-213ENST00000520267 MRS2Q9HD23 443 aa35.45■■■■□ 3.27
COL13A1-213ENST00000520267 ASXL2Q76L83 1435 aa35.42■■■■□ 3.26
COL13A1-213ENST00000520267 INO80Q9ULG1 1556 aaPredicted RBP35.39■■■■□ 3.26
COL13A1-213ENST00000520267 E9PCH4 1651 aa35.38■■■■□ 3.25
COL13A1-213ENST00000520267 FAM9BQ8IZU0 186 aa35.38■■■■□ 3.25
COL13A1-213ENST00000520267 ATP7AQ04656 1500 aa35.37■■■■□ 3.25
COL13A1-213ENST00000520267 NBPF1Q3BBV0 1214 aa35.36■■■■□ 3.25
COL13A1-213ENST00000520267 DEPDC5O75140 1603 aa35.35■■■■□ 3.25
COL13A1-213ENST00000520267 ADGRL1O94910 1474 aa35.34■■■■□ 3.25
COL13A1-213ENST00000520267 OSCARQ8IYS5 282 aa35.34■■■■□ 3.25
COL13A1-213ENST00000520267 BCANQ96GW7 911 aa35.33■■■■□ 3.25
COL13A1-213ENST00000520267 GPRASP1Q5JY77 1395 aa35.32■■■■□ 3.25
COL13A1-213ENST00000520267 SCAPERQ9BY12 1400 aa35.32■■■■□ 3.24
COL13A1-213ENST00000520267 NEFLP07196 543 aa35.32■■■■□ 3.24
COL13A1-213ENST00000520267 CNGB1Q14028 1251 aaPredicted RBP35.31■■■■□ 3.24
COL13A1-213ENST00000520267 LAMC1P11047 1609 aa35.3■■■■□ 3.24
COL13A1-213ENST00000520267 EIF2AK4Q9P2K8 1649 aaKnown RBP35.29■■■■□ 3.24
COL13A1-213ENST00000520267 PRDM15P57071 1507 aaPredicted RBP35.26■■■■□ 3.24
COL13A1-213ENST00000520267 SPHKAPQ2M3C7 1700 aa35.24■■■■□ 3.23
COL13A1-213ENST00000520267 TRPM2O94759 1503 aa35.24■■■■□ 3.23
COL13A1-213ENST00000520267 TET3O43151 1660 aa35.23■■■■□ 3.23
COL13A1-213ENST00000520267 MYT1LQ9UL68 1186 aa35.23■■■■□ 3.23
COL13A1-213ENST00000520267 VWDEQ8N2E2 1590 aa35.22■■■■□ 3.23
COL13A1-213ENST00000520267 PTPRTO14522 1441 aa35.2■■■■□ 3.23
COL13A1-213ENST00000520267 CEP152O94986 1710 aa35.2■■■■□ 3.23
COL13A1-213ENST00000520267 NPM1P06748 294 aaKnown RBP eCLIP35.19■■■■□ 3.22
COL13A1-213ENST00000520267 KIF3BO15066 747 aa35.18■■■■□ 3.22
COL13A1-213ENST00000520267 CLTCL1P53675 1640 aa35.17■■■■□ 3.22
COL13A1-213ENST00000520267 KANK1Q14678 1352 aa35.17■■■■□ 3.22
COL13A1-213ENST00000520267 ZBED9Q6R2W3 1325 aa35.16■■■■□ 3.22
COL13A1-213ENST00000520267 KIDINS220Q9ULH0 1771 aa35.16■■■■□ 3.22
COL13A1-213ENST00000520267 RNF17Q9BXT8 1623 aaKnown RBP35.16■■■■□ 3.22
COL13A1-213ENST00000520267 MROH1Q8NDA8 1641 aa35.15■■■■□ 3.22
COL13A1-213ENST00000520267 MADDQ8WXG6 1647 aa35.13■■■■□ 3.21
COL13A1-213ENST00000520267 TESK2Q96S53 571 aa35.12■■■■□ 3.21
COL13A1-213ENST00000520267 COL17A1Q9UMD9 1497 aaPredicted RBP35.11■■■■□ 3.21
COL13A1-213ENST00000520267 DISP3Q9P2K9 1392 aa35.08■■■■□ 3.21
COL13A1-213ENST00000520267 ZNF518AQ6AHZ1 1483 aa35.07■■■■□ 3.21
COL13A1-213ENST00000520267 CD109Q6YHK3 1445 aa35.06■■■■□ 3.2
COL13A1-213ENST00000520267 KTN1Q86UP2 1357 aaKnown RBP35.03■■■■□ 3.2
COL13A1-213ENST00000520267 CFAP74Q9C0B2 1584 aa35.02■■■■□ 3.2
COL13A1-213ENST00000520267 RALBP1Q15311 655 aa35.02■■■■□ 3.2
COL13A1-213ENST00000520267 PNISRQ8TF01 805 aaKnown RBP35.02■■■■□ 3.2
COL13A1-213ENST00000520267 TMC1Q8TDI8 760 aa35.01■■■■□ 3.2
COL13A1-213ENST00000520267 MYBBP1AQ9BQG0 1328 aaKnown RBP35■■■■□ 3.19
COL13A1-213ENST00000520267 IQGAP1P46940 1657 aa34.99■■■■□ 3.19
COL13A1-213ENST00000520267 EFCAB6Q5THR3 1501 aa34.97■■■■□ 3.19
COL13A1-213ENST00000520267 PER1O15534 1290 aaPredicted RBP34.97■■■■□ 3.19
COL13A1-213ENST00000520267 TMF1P82094 1093 aa34.97■■■■□ 3.19
COL13A1-213ENST00000520267 POGZQ7Z3K3 1410 aa34.97■■■■□ 3.19
COL13A1-213ENST00000520267 STAC3Q96MF2 364 aa34.97■■■■□ 3.19
COL13A1-213ENST00000520267 TSHZ2Q9NRE2 1034 aa34.97■■■■□ 3.19
COL13A1-213ENST00000520267 IRX6P78412 446 aaPredicted RBP34.96■■■■□ 3.19
COL13A1-213ENST00000520267 BRD4O60885 1362 aaPredicted RBP34.95■■■■□ 3.19
COL13A1-213ENST00000520267 UGGT1Q9NYU2 1555 aa34.95■■■■□ 3.19
COL13A1-213ENST00000520267 PPRC1Q5VV67 1664 aaKnown RBP34.95■■■■□ 3.19
COL13A1-213ENST00000520267 NEURL4Q96JN8 1562 aa34.93■■■■□ 3.18
COL13A1-213ENST00000520267 PARD3Q8TEW0 1356 aa34.92■■■■□ 3.18
COL13A1-213ENST00000520267 LMTK2Q8IWU2 1503 aa34.9■■■■□ 3.18
COL13A1-213ENST00000520267 MLH3Q9UHC1 1453 aa34.9■■■■□ 3.18
COL13A1-213ENST00000520267 KIF1BO60333 1816 aa34.89■■■■□ 3.18
COL13A1-213ENST00000520267 FRMPD1Q5SYB0 1578 aa34.88■■■■□ 3.17
COL13A1-213ENST00000520267 LRPPRCP42704 1394 aaKnown RBP34.88■■■■□ 3.17
COL13A1-213ENST00000520267 HECW2Q9P2P5 1572 aa34.88■■■■□ 3.17
COL13A1-213ENST00000520267 SCAF11Q99590 1463 aaKnown RBP34.87■■■■□ 3.17
COL13A1-213ENST00000520267 PANK3Q9H999 370 aa34.86■■■■□ 3.17
COL13A1-213ENST00000520267 KIAA1210Q9ULL0 1709 aa34.86■■■■□ 3.17
COL13A1-213ENST00000520267 MROH2AA6NES4 1674 aa34.83■■■■□ 3.17
COL13A1-213ENST00000520267 SMG6Q86US8 1419 aaKnown RBP34.83■■■■□ 3.17
COL13A1-213ENST00000520267 MAP3K4Q9Y6R4 1608 aa34.82■■■■□ 3.16
COL13A1-213ENST00000520267 WASHC2CQ9Y4E1 1318 aa34.82■■■■□ 3.16
COL13A1-213ENST00000520267 ABCA6Q8N139 1617 aa34.81■■■■□ 3.16
COL13A1-213ENST00000520267 NLRP13Q86W25 1043 aa34.81■■■■□ 3.16
COL13A1-213ENST00000520267 IFT172Q9UG01 1749 aa34.81■■■■□ 3.16
COL13A1-213ENST00000520267 MYOM2P54296 1465 aa34.8■■■■□ 3.16
COL13A1-213ENST00000520267 SENP3-EIF4A1A0A087X0R7 540 aa34.8■■■■□ 3.16
COL13A1-213ENST00000520267 CC2D1BQ5T0F9 858 aaKnown RBP34.78■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms