RNA–Protein interactions for RNA: ENST00000519575.5

PDGFRB-205, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 712 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-205ENST00000519575 KIDINS220Q9ULH0 1771 aa14.35□□□□□ -0.11
PDGFRB-205ENST00000519575 RNF17Q9BXT8 1623 aaKnown RBP14.34□□□□□ -0.11
PDGFRB-205ENST00000519575 CCDC144AA2RUR9 1427 aa14.34□□□□□ -0.11
PDGFRB-205ENST00000519575 DIP2BQ9P265 1576 aa14.34□□□□□ -0.11
PDGFRB-205ENST00000519575 DHX29Q7Z478 1369 aaKnown RBP14.34□□□□□ -0.11
PDGFRB-205ENST00000519575 VWDEQ8N2E2 1590 aa14.32□□□□□ -0.12
PDGFRB-205ENST00000519575 AFAP1Q8N556 730 aa14.31□□□□□ -0.12
PDGFRB-205ENST00000519575 L3MBTL2Q969R5 705 aa14.31□□□□□ -0.12
PDGFRB-205ENST00000519575 CYB5RLQ6IPT4 315 aa14.3□□□□□ -0.12
PDGFRB-205ENST00000519575 MYT1LQ9UL68 1186 aa14.3□□□□□ -0.12
PDGFRB-205ENST00000519575 UHRF1BP1Q6BDS2 1440 aa14.3□□□□□ -0.12
PDGFRB-205ENST00000519575 A2MP01023 1474 aa14.3□□□□□ -0.12
PDGFRB-205ENST00000519575 NEURL4Q96JN8 1562 aa14.3□□□□□ -0.12
PDGFRB-205ENST00000519575 SPHKAPQ2M3C7 1700 aa14.29□□□□□ -0.12
PDGFRB-205ENST00000519575 RICTORQ6R327 1708 aa14.29□□□□□ -0.12
PDGFRB-205ENST00000519575 FOXD1Q16676 465 aa14.29□□□□□ -0.12
PDGFRB-205ENST00000519575 LMTK2Q8IWU2 1503 aa14.29□□□□□ -0.12
PDGFRB-205ENST00000519575 POLR1AO95602 1720 aaPredicted RBP14.29□□□□□ -0.12
PDGFRB-205ENST00000519575 TRPM2O94759 1503 aa14.28□□□□□ -0.12
PDGFRB-205ENST00000519575 ZMYM4Q5VZL5 1548 aa14.28□□□□□ -0.12
PDGFRB-205ENST00000519575 STAC3Q96MF2 364 aa14.28□□□□□ -0.12
PDGFRB-205ENST00000519575 E9PCH4 1651 aa14.27□□□□□ -0.12
PDGFRB-205ENST00000519575 EIF4G2P78344 907 aaKnown RBP eCLIP14.27□□□□□ -0.13
PDGFRB-205ENST00000519575 ZC3H13Q5T200 1668 aaKnown RBP14.26□□□□□ -0.13
PDGFRB-205ENST00000519575 RALGAPBQ86X10 1494 aa14.26□□□□□ -0.13
PDGFRB-205ENST00000519575 CEP152O94986 1710 aa14.26□□□□□ -0.13
PDGFRB-205ENST00000519575 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.25□□□□□ -0.13
PDGFRB-205ENST00000519575 ABCA6Q8N139 1617 aa14.25□□□□□ -0.13
PDGFRB-205ENST00000519575 EFCAB6Q5THR3 1501 aa14.25□□□□□ -0.13
PDGFRB-205ENST00000519575 MROH1Q8NDA8 1641 aa14.24□□□□□ -0.13
PDGFRB-205ENST00000519575 LAMC1P11047 1609 aa14.23□□□□□ -0.13
PDGFRB-205ENST00000519575 PTPRTO14522 1441 aa14.23□□□□□ -0.13
PDGFRB-205ENST00000519575 REREQ9P2R6 1566 aa14.22□□□□□ -0.13
PDGFRB-205ENST00000519575 DIP2CQ9Y2E4 1556 aa14.22□□□□□ -0.13
PDGFRB-205ENST00000519575 KIF3BO15066 747 aa14.21□□□□□ -0.13
PDGFRB-205ENST00000519575 CENPBP07199 599 aaPredicted RBP14.2□□□□□ -0.14
PDGFRB-205ENST00000519575 FRMPD1Q5SYB0 1578 aa14.2□□□□□ -0.14
PDGFRB-205ENST00000519575 KIF1BO60333 1816 aa14.2□□□□□ -0.14
PDGFRB-205ENST00000519575 PLA2R1Q13018 1463 aa14.19□□□□□ -0.14
PDGFRB-205ENST00000519575 ARID4BQ4LE39 1312 aaPredicted RBP14.19□□□□□ -0.14
PDGFRB-205ENST00000519575 PPRC1Q5VV67 1664 aaKnown RBP14.19□□□□□ -0.14
PDGFRB-205ENST00000519575 KIF13AQ9H1H9 1805 aa14.18□□□□□ -0.14
PDGFRB-205ENST00000519575 FAM69CQ0P6D2 419 aa14.18□□□□□ -0.14
PDGFRB-205ENST00000519575 TRPM1Q7Z4N2 1603 aa14.17□□□□□ -0.14
PDGFRB-205ENST00000519575 TSPOAP1O95153 1857 aa14.16□□□□□ -0.14
PDGFRB-205ENST00000519575 SPATA31E1Q6ZUB1 1445 aa14.15□□□□□ -0.14
PDGFRB-205ENST00000519575 PRAG1Q86YV5 1406 aa14.15□□□□□ -0.14
PDGFRB-205ENST00000519575 CNTLNQ9NXG0 1405 aa14.15□□□□□ -0.14
PDGFRB-205ENST00000519575 CAMSAP1Q5T5Y3 1602 aa14.15□□□□□ -0.14
PDGFRB-205ENST00000519575 HSPA5P11021 654 aaKnown RBP14.15□□□□□ -0.14
PDGFRB-205ENST00000519575 KIAA1210Q9ULL0 1709 aa14.15□□□□□ -0.14
PDGFRB-205ENST00000519575 CLTCL1P53675 1640 aa14.15□□□□□ -0.14
PDGFRB-205ENST00000519575 USP47Q96K76 1375 aa14.14□□□□□ -0.15
PDGFRB-205ENST00000519575 ABCC3O15438 1527 aa14.14□□□□□ -0.15
PDGFRB-205ENST00000519575 AGLP35573 1532 aa14.14□□□□□ -0.15
PDGFRB-205ENST00000519575 NBPF8Q3BBV2 869 aa14.13□□□□□ -0.15
PDGFRB-205ENST00000519575 MIER1Q8N108 512 aa14.13□□□□□ -0.15
PDGFRB-205ENST00000519575 DCAF11Q8TEB1 546 aa14.13□□□□□ -0.15
PDGFRB-205ENST00000519575 PPP6R1Q9UPN7 881 aa14.13□□□□□ -0.15
PDGFRB-205ENST00000519575 ARHGAP31Q2M1Z3 1444 aa14.13□□□□□ -0.15
PDGFRB-205ENST00000519575 ROCK2O75116 1388 aaKnown RBP14.12□□□□□ -0.15
PDGFRB-205ENST00000519575 GPRASP1Q5JY77 1395 aa14.12□□□□□ -0.15
PDGFRB-205ENST00000519575 ANP32CO43423 234 aa14.11□□□□□ -0.15
PDGFRB-205ENST00000519575 MYOM2P54296 1465 aa14.11□□□□□ -0.15
PDGFRB-205ENST00000519575 ARHGEF40Q8TER5 1519 aa14.1□□□□□ -0.15
PDGFRB-205ENST00000519575 MADDQ8WXG6 1647 aa14.09□□□□□ -0.15
PDGFRB-205ENST00000519575 RAPGEF3O95398 923 aa14.09□□□□□ -0.15
PDGFRB-205ENST00000519575 DDX10Q13206 875 aaKnown RBP14.09□□□□□ -0.15
PDGFRB-205ENST00000519575 ZNF326Q5BKZ1 582 aaKnown RBP14.09□□□□□ -0.15
PDGFRB-205ENST00000519575 CARD11Q9BXL7 1154 aa14.09□□□□□ -0.15
PDGFRB-205ENST00000519575 WASHC2CQ9Y4E1 1318 aa14.09□□□□□ -0.15
PDGFRB-205ENST00000519575 CCDC7Q96M83 1385 aa14.09□□□□□ -0.15
PDGFRB-205ENST00000519575 IFT172Q9UG01 1749 aa14.08□□□□□ -0.16
PDGFRB-205ENST00000519575 ADGRB3O60242 1522 aa14.07□□□□□ -0.16
PDGFRB-205ENST00000519575 CCER2I3L3R5 266 aa14.07□□□□□ -0.16
PDGFRB-205ENST00000519575 SLC24A1O60721 1099 aa14.07□□□□□ -0.16
PDGFRB-205ENST00000519575 NPATQ14207 1427 aa14.07□□□□□ -0.16
PDGFRB-205ENST00000519575 PIK3C2BO00750 1634 aa14.05□□□□□ -0.16
PDGFRB-205ENST00000519575 WASHC2AQ641Q2 1341 aa14.05□□□□□ -0.16
PDGFRB-205ENST00000519575 RPGRIP1LQ68CZ1 1315 aa14.05□□□□□ -0.16
PDGFRB-205ENST00000519575 EIF3AQ14152 1382 aaKnown RBP14.05□□□□□ -0.16
PDGFRB-205ENST00000519575 YEATS2Q9ULM3 1422 aa14.05□□□□□ -0.16
PDGFRB-205ENST00000519575 GGT6Q6P531 493 aa14.04□□□□□ -0.16
PDGFRB-205ENST00000519575 KDM2AQ9Y2K7 1162 aa14.04□□□□□ -0.16
PDGFRB-205ENST00000519575 NOS1P29475 1434 aa14.04□□□□□ -0.16
PDGFRB-205ENST00000519575 RGL3Q3MIN7 710 aa14.03□□□□□ -0.16
PDGFRB-205ENST00000519575 IQGAP1P46940 1657 aa14.03□□□□□ -0.16
PDGFRB-205ENST00000519575 PPLO60437 1756 aa14.02□□□□□ -0.16
PDGFRB-205ENST00000519575 PREX1Q8TCU6 1659 aa14.02□□□□□ -0.16
PDGFRB-205ENST00000519575 HIRIP3Q9BW71 556 aaPredicted RBP14.01□□□□□ -0.17
PDGFRB-205ENST00000519575 MROH2AA6NES4 1674 aa14.01□□□□□ -0.17
PDGFRB-205ENST00000519575 SETBP1Q9Y6X0 1596 aa14□□□□□ -0.17
PDGFRB-205ENST00000519575 NRXN1Q9ULB1 1477 aa14□□□□□ -0.17
PDGFRB-205ENST00000519575 KIF7Q2M1P5 1343 aa14□□□□□ -0.17
PDGFRB-205ENST00000519575 SLC52A1Q9NWF4 448 aa14□□□□□ -0.17
PDGFRB-205ENST00000519575 SCAF11Q99590 1463 aaKnown RBP13.99□□□□□ -0.17
PDGFRB-205ENST00000519575 KTN1Q86UP2 1357 aaKnown RBP13.98□□□□□ -0.17
PDGFRB-205ENST00000519575 CDCA8Q53HL2 280 aa13.98□□□□□ -0.17
PDGFRB-205ENST00000519575 SYNMO15061 1565 aa13.97□□□□□ -0.17
PDGFRB-205ENST00000519575 SIGLEC1Q9BZZ2 1709 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms