RNA–Protein interactions for RNA: ENST00000519528.1

UBR5-206, Transcript of ubiquitin protein ligase E3 component n-recognin 5, human

TSL 3

Gene UBR5, Length 325 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR5-206	ENST00000519528	NEURL4	Q96JN8	1562 aa		13.87	□□□□□ -0.19
UBR5-206	ENST00000519528	ZNF644	Q9H582	1327 aa	Predicted RBP	13.87	□□□□□ -0.19
UBR5-206	ENST00000519528	DNAJC5B	Q9UF47	199 aa		13.85	□□□□□ -0.19
UBR5-206	ENST00000519528	ARAP3	Q8WWN8	1544 aa		13.85	□□□□□ -0.19
UBR5-206	ENST00000519528	PLEKHD1	A6NEE1	506 aa		13.84	□□□□□ -0.19
UBR5-206	ENST00000519528	DUOX2	Q9NRD8	1548 aa		13.84	□□□□□ -0.19
UBR5-206	ENST00000519528	CHD1	O14646	1710 aa		13.84	□□□□□ -0.19
UBR5-206	ENST00000519528	CHMP7	Q8WUX9	453 aa	Predicted RBP	13.83	□□□□□ -0.2
UBR5-206	ENST00000519528	JPH4	Q96JJ6	628 aa		13.83	□□□□□ -0.2
UBR5-206	ENST00000519528	NUDC	Q9Y266	331 aa		13.83	□□□□□ -0.2
UBR5-206	ENST00000519528	WASHC2C	Q9Y4E1	1318 aa		13.83	□□□□□ -0.2
UBR5-206	ENST00000519528	PRAG1	Q86YV5	1406 aa		13.82	□□□□□ -0.2
UBR5-206	ENST00000519528	PKD2	Q13563	968 aa		13.82	□□□□□ -0.2
UBR5-206	ENST00000519528	RALBP1	Q15311	655 aa		13.82	□□□□□ -0.2
UBR5-206	ENST00000519528	NUP155	O75694	1391 aa		13.82	□□□□□ -0.2
UBR5-206	ENST00000519528	ERBIN	Q96RT1	1412 aa		13.81	□□□□□ -0.2
UBR5-206	ENST00000519528	KIAA1210	Q9ULL0	1709 aa		13.81	□□□□□ -0.2
UBR5-206	ENST00000519528	COL17A1	Q9UMD9	1497 aa	Predicted RBP	13.81	□□□□□ -0.2
UBR5-206	ENST00000519528	FOXD1	Q16676	465 aa		13.81	□□□□□ -0.2
UBR5-206	ENST00000519528	CEP152	O94986	1710 aa		13.81	□□□□□ -0.2
UBR5-206	ENST00000519528	ABCC2	Q92887	1545 aa		13.8	□□□□□ -0.2
UBR5-206	ENST00000519528	IQGAP1	P46940	1657 aa		13.8	□□□□□ -0.2
UBR5-206	ENST00000519528	TTC37	Q6PGP7	1564 aa		13.79	□□□□□ -0.2
UBR5-206	ENST00000519528	SPHKAP	Q2M3C7	1700 aa		13.79	□□□□□ -0.2
UBR5-206	ENST00000519528	TSPY4	P0CV99	314 aa		13.79	□□□□□ -0.2
UBR5-206	ENST00000519528	TSPY10	P0CW01	314 aa		13.79	□□□□□ -0.2
UBR5-206	ENST00000519528	DEPDC5	O75140	1603 aa		13.79	□□□□□ -0.2
UBR5-206	ENST00000519528	CCDC184	Q52MB2	194 aa		13.78	□□□□□ -0.2
UBR5-206	ENST00000519528	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.78	□□□□□ -0.2
UBR5-206	ENST00000519528	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
UBR5-206	ENST00000519528	SYCP2	Q9BX26	1530 aa		13.78	□□□□□ -0.2
UBR5-206	ENST00000519528	CCDC144A	A2RUR9	1427 aa		13.77	□□□□□ -0.21
UBR5-206	ENST00000519528	PARD3	Q8TEW0	1356 aa		13.77	□□□□□ -0.21
UBR5-206	ENST00000519528	UHRF1BP1L	A0JNW5	1464 aa		13.76	□□□□□ -0.21
UBR5-206	ENST00000519528	PDE3B	Q13370	1112 aa		13.76	□□□□□ -0.21
UBR5-206	ENST00000519528	FAM9B	Q8IZU0	186 aa		13.75	□□□□□ -0.21
UBR5-206	ENST00000519528	PNISR	Q8TF01	805 aa	Known RBP	13.75	□□□□□ -0.21
UBR5-206	ENST00000519528	NOP58	Q9Y2X3	529 aa	Known RBP	13.75	□□□□□ -0.21
UBR5-206	ENST00000519528	ABCC1	P33527	1531 aa		13.74	□□□□□ -0.21
UBR5-206	ENST00000519528	CLASP1	Q7Z460	1538 aa		13.74	□□□□□ -0.21
UBR5-206	ENST00000519528	STAC3	Q96MF2	364 aa		13.74	□□□□□ -0.21
UBR5-206	ENST00000519528	ARHGAP5	Q13017	1502 aa		13.74	□□□□□ -0.21
UBR5-206	ENST00000519528	A2M	P01023	1474 aa		13.74	□□□□□ -0.21
UBR5-206	ENST00000519528	BLM	P54132	1417 aa	Predicted RBP	13.73	□□□□□ -0.21
UBR5-206	ENST00000519528	MADD	Q8WXG6	1647 aa		13.73	□□□□□ -0.21
UBR5-206	ENST00000519528	SYNM	O15061	1565 aa		13.73	□□□□□ -0.21
UBR5-206	ENST00000519528	WDR7	Q9Y4E6	1490 aa		13.73	□□□□□ -0.21
UBR5-206	ENST00000519528	TET3	O43151	1660 aa		13.72	□□□□□ -0.21
UBR5-206	ENST00000519528	DEK	P35659	375 aa	Known RBP	13.72	□□□□□ -0.21
UBR5-206	ENST00000519528	CARD11	Q9BXL7	1154 aa		13.72	□□□□□ -0.21
UBR5-206	ENST00000519528	TRPM2	O94759	1503 aa		13.72	□□□□□ -0.21
UBR5-206	ENST00000519528	PLA2R1	Q13018	1463 aa		13.7	□□□□□ -0.22
UBR5-206	ENST00000519528	NLRP13	Q86W25	1043 aa		13.7	□□□□□ -0.22
UBR5-206	ENST00000519528	ZCCHC11	Q5TAX3	1644 aa	Known RBP	13.7	□□□□□ -0.22
UBR5-206	ENST00000519528	RTEL1-TNFRSF6B	F6WH68	1400 aa		13.7	□□□□□ -0.22
UBR5-206	ENST00000519528	ARID3C	A6NKF2	412 aa		13.69	□□□□□ -0.22
UBR5-206	ENST00000519528	VWDE	Q8N2E2	1590 aa		13.68	□□□□□ -0.22
UBR5-206	ENST00000519528	ANP32A	P39687	249 aa	Known RBP	13.68	□□□□□ -0.22
UBR5-206	ENST00000519528	SCAPER	Q9BY12	1400 aa		13.67	□□□□□ -0.22
UBR5-206	ENST00000519528	TMC1	Q8TDI8	760 aa		13.67	□□□□□ -0.22
UBR5-206	ENST00000519528	ZNF777	Q9ULD5	760 aa	Predicted RBP	13.67	□□□□□ -0.22
UBR5-206	ENST00000519528	PLCH2	O75038	1416 aa		13.66	□□□□□ -0.22
UBR5-206	ENST00000519528	IPO9	Q96P70	1041 aa	Known RBP	13.66	□□□□□ -0.22
UBR5-206	ENST00000519528	IFT172	Q9UG01	1749 aa		13.66	□□□□□ -0.22
UBR5-206	ENST00000519528	INO80	Q9ULG1	1556 aa	Predicted RBP	13.66	□□□□□ -0.22
UBR5-206	ENST00000519528	MYO3A	Q8NEV4	1616 aa		13.65	□□□□□ -0.22
UBR5-206	ENST00000519528	IRX6	P78412	446 aa	Predicted RBP	13.65	□□□□□ -0.22
UBR5-206	ENST00000519528	MYOM1	P52179	1685 aa		13.65	□□□□□ -0.22
UBR5-206	ENST00000519528	ZFYVE16	Q7Z3T8	1539 aa		13.64	□□□□□ -0.23
UBR5-206	ENST00000519528	ABCA9	Q8IUA7	1624 aa		13.64	□□□□□ -0.23
UBR5-206	ENST00000519528	KDM5A	P29375	1690 aa	Known RBP	13.64	□□□□□ -0.23
UBR5-206	ENST00000519528	NPC1L1	Q9UHC9	1359 aa		13.64	□□□□□ -0.23
UBR5-206	ENST00000519528	ST20-MTHFS	A0A0A6YYL1	179 aa		13.63	□□□□□ -0.23
UBR5-206	ENST00000519528	B4GALNT3	Q6L9W6	998 aa		13.63	□□□□□ -0.23
UBR5-206	ENST00000519528	PTPRT	O14522	1441 aa		13.63	□□□□□ -0.23
UBR5-206	ENST00000519528	USP35	Q9P2H5	1018 aa		13.62	□□□□□ -0.23
UBR5-206	ENST00000519528	KIF1B	O60333	1816 aa		13.62	□□□□□ -0.23
UBR5-206	ENST00000519528	SLC24A1	O60721	1099 aa		13.61	□□□□□ -0.23
UBR5-206	ENST00000519528	RTL5	Q5HYW3	569 aa	Predicted RBP	13.61	□□□□□ -0.23
UBR5-206	ENST00000519528	MYOM2	P54296	1465 aa		13.61	□□□□□ -0.23
UBR5-206	ENST00000519528	PER1	O15534	1290 aa	Predicted RBP	13.6	□□□□□ -0.23
UBR5-206	ENST00000519528	DCAF11	Q8TEB1	546 aa		13.6	□□□□□ -0.23
UBR5-206	ENST00000519528	CCDC136	Q96JN2	1154 aa		13.6	□□□□□ -0.23
UBR5-206	ENST00000519528	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.6	□□□□□ -0.23
UBR5-206	ENST00000519528	VIRMA	Q69YN4	1812 aa	Known RBP	13.6	□□□□□ -0.23
UBR5-206	ENST00000519528	PIK3C2G	O75747	1445 aa		13.59	□□□□□ -0.23
UBR5-206	ENST00000519528	MS4A1	P11836	297 aa		13.59	□□□□□ -0.23
UBR5-206	ENST00000519528	RRP1	P56182	461 aa	Known RBP	13.59	□□□□□ -0.23
UBR5-206	ENST00000519528	CLTCL1	P53675	1640 aa		13.59	□□□□□ -0.23
UBR5-206	ENST00000519528	TCERG1	O14776	1098 aa	Known RBP	13.58	□□□□□ -0.24
UBR5-206	ENST00000519528	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
UBR5-206	ENST00000519528	TESK2	Q96S53	571 aa		13.58	□□□□□ -0.24
UBR5-206	ENST00000519528	SCAF11	Q99590	1463 aa	Known RBP	13.58	□□□□□ -0.24
UBR5-206	ENST00000519528	MAP3K4	Q9Y6R4	1608 aa		13.57	□□□□□ -0.24
UBR5-206	ENST00000519528	ZNF326	Q5BKZ1	582 aa	Known RBP	13.57	□□□□□ -0.24
UBR5-206	ENST00000519528	LMTK2	Q8IWU2	1503 aa		13.56	□□□□□ -0.24
UBR5-206	ENST00000519528	ASXL1	Q8IXJ9	1541 aa		13.56	□□□□□ -0.24
UBR5-206	ENST00000519528	TMF1	P82094	1093 aa		13.56	□□□□□ -0.24
UBR5-206	ENST00000519528	CDCA8	Q53HL2	280 aa		13.56	□□□□□ -0.24
UBR5-206	ENST00000519528	SETBP1	Q9Y6X0	1596 aa		13.56	□□□□□ -0.24

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