RNA–Protein interactions for RNA: ENST00000519363.1

PABPC1-210, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-210ENST00000519363 PRDM15P57071 1507 aaPredicted RBP21.93■■□□□ 1.1
PABPC1-210ENST00000519363 REREQ9P2R6 1566 aa21.92■■□□□ 1.1
PABPC1-210ENST00000519363 FAM135AQ9P2D6 1515 aa21.92■■□□□ 1.1
PABPC1-210ENST00000519363 MPHOSPH9Q99550 1183 aa21.91■■□□□ 1.1
PABPC1-210ENST00000519363 MROH1Q8NDA8 1641 aa21.91■■□□□ 1.1
PABPC1-210ENST00000519363 NUP155O75694 1391 aa21.9■■□□□ 1.1
PABPC1-210ENST00000519363 VWDEQ8N2E2 1590 aa21.9■■□□□ 1.1
PABPC1-210ENST00000519363 ARHGEF40Q8TER5 1519 aa21.9■■□□□ 1.1
PABPC1-210ENST00000519363 COL17A1Q9UMD9 1497 aaPredicted RBP21.89■■□□□ 1.09
PABPC1-210ENST00000519363 MYT1LQ9UL68 1186 aa21.87■■□□□ 1.09
PABPC1-210ENST00000519363 YEATS2Q9ULM3 1422 aa21.87■■□□□ 1.09
PABPC1-210ENST00000519363 SLC4A1APQ9BWU0 796 aaKnown RBP21.85■■□□□ 1.09
PABPC1-210ENST00000519363 TET3O43151 1660 aa21.84■■□□□ 1.09
PABPC1-210ENST00000519363 ATP10AO60312 1499 aa21.83■■□□□ 1.08
PABPC1-210ENST00000519363 ANKRD30BQ9BXX2 1392 aa21.82■■□□□ 1.08
PABPC1-210ENST00000519363 AGLP35573 1532 aa21.8■■□□□ 1.08
PABPC1-210ENST00000519363 LMTK2Q8IWU2 1503 aa21.8■■□□□ 1.08
PABPC1-210ENST00000519363 KANK1Q14678 1352 aa21.79■■□□□ 1.08
PABPC1-210ENST00000519363 TRHP20396 242 aaPredicted RBP21.79■■□□□ 1.08
PABPC1-210ENST00000519363 ZC3H13Q5T200 1668 aaKnown RBP21.79■■□□□ 1.08
PABPC1-210ENST00000519363 E9PCH4 1651 aa21.77■■□□□ 1.08
PABPC1-210ENST00000519363 KIF3BO15066 747 aa21.77■■□□□ 1.08
PABPC1-210ENST00000519363 TIMELESSQ9UNS1 1208 aa21.77■■□□□ 1.08
PABPC1-210ENST00000519363 CEP152O94986 1710 aa21.77■■□□□ 1.08
PABPC1-210ENST00000519363 PKD2Q13563 968 aa21.76■■□□□ 1.07
PABPC1-210ENST00000519363 EFCAB6Q5THR3 1501 aa21.75■■□□□ 1.07
PABPC1-210ENST00000519363 RPRD2Q5VT52 1461 aaKnown RBP21.75■■□□□ 1.07
PABPC1-210ENST00000519363 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.73■■□□□ 1.07
PABPC1-210ENST00000519363 SIGLEC1Q9BZZ2 1709 aa21.72■■□□□ 1.07
PABPC1-210ENST00000519363 SIN3AQ96ST3 1273 aa21.72■■□□□ 1.07
PABPC1-210ENST00000519363 SPHKAPQ2M3C7 1700 aa21.72■■□□□ 1.07
PABPC1-210ENST00000519363 ABCC3O15438 1527 aa21.71■■□□□ 1.07
PABPC1-210ENST00000519363 FOXD1Q16676 465 aa21.7■■□□□ 1.06
PABPC1-210ENST00000519363 CAMSAP1Q5T5Y3 1602 aa21.69■■□□□ 1.06
PABPC1-210ENST00000519363 TRPM2O94759 1503 aa21.68■■□□□ 1.06
PABPC1-210ENST00000519363 PLA2R1Q13018 1463 aa21.66■■□□□ 1.06
PABPC1-210ENST00000519363 TONSLQ96HA7 1378 aa21.66■■□□□ 1.06
PABPC1-210ENST00000519363 PTPRTO14522 1441 aa21.65■■□□□ 1.06
PABPC1-210ENST00000519363 NEUROD1Q13562 356 aa21.65■■□□□ 1.06
PABPC1-210ENST00000519363 ARHGAP31Q2M1Z3 1444 aa21.62■■□□□ 1.05
PABPC1-210ENST00000519363 CCDC144AA2RUR9 1427 aa21.61■■□□□ 1.05
PABPC1-210ENST00000519363 PPP6R1Q9UPN7 881 aa21.6■■□□□ 1.05
PABPC1-210ENST00000519363 GGT6Q6P531 493 aa21.59■■□□□ 1.05
PABPC1-210ENST00000519363 NPATQ14207 1427 aa21.58■■□□□ 1.05
PABPC1-210ENST00000519363 NEURL4Q96JN8 1562 aa21.57■■□□□ 1.04
PABPC1-210ENST00000519363 CLTCL1P53675 1640 aa21.57■■□□□ 1.04
PABPC1-210ENST00000519363 CLTCQ00610 1675 aaKnown RBP21.56■■□□□ 1.04
PABPC1-210ENST00000519363 WASHC2CQ9Y4E1 1318 aa21.55■■□□□ 1.04
PABPC1-210ENST00000519363 CNTLNQ9NXG0 1405 aa21.55■■□□□ 1.04
PABPC1-210ENST00000519363 PREX1Q8TCU6 1659 aa21.53■■□□□ 1.04
PABPC1-210ENST00000519363 PPP1R15AO75807 674 aaPredicted RBP21.52■■□□□ 1.04
PABPC1-210ENST00000519363 MROH2AA6NES4 1674 aa21.52■■□□□ 1.04
PABPC1-210ENST00000519363 NOS1P29475 1434 aa21.52■■□□□ 1.04
PABPC1-210ENST00000519363 KIF1BO60333 1816 aa21.51■■□□□ 1.03
PABPC1-210ENST00000519363 PIK3C2BO00750 1634 aa21.51■■□□□ 1.03
PABPC1-210ENST00000519363 SYNMO15061 1565 aa21.49■■□□□ 1.03
PABPC1-210ENST00000519363 SPATA31E1Q6ZUB1 1445 aa21.49■■□□□ 1.03
PABPC1-210ENST00000519363 CFAP65Q6ZU64 1925 aaKnown RBP21.49■■□□□ 1.03
PABPC1-210ENST00000519363 L3MBTL2Q969R5 705 aa21.48■■□□□ 1.03
PABPC1-210ENST00000519363 UHRF1BP1Q6BDS2 1440 aa21.45■■□□□ 1.02
PABPC1-210ENST00000519363 ADGRB3O60242 1522 aa21.45■■□□□ 1.02
PABPC1-210ENST00000519363 SPATA31D1Q6ZQQ2 1576 aa21.44■■□□□ 1.02
PABPC1-210ENST00000519363 UGGT1Q9NYU2 1555 aa21.44■■□□□ 1.02
PABPC1-210ENST00000519363 FER1L4A9Z1Z3 1794 aa21.44■■□□□ 1.02
PABPC1-210ENST00000519363 ERVK-7P63135 1459 aa21.44■■□□□ 1.02
PABPC1-210ENST00000519363 IFT172Q9UG01 1749 aa21.42■■□□□ 1.02
PABPC1-210ENST00000519363 ARID4BQ4LE39 1312 aaPredicted RBP21.4■■□□□ 1.02
PABPC1-210ENST00000519363 MLECQ14165 292 aa21.37■■□□□ 1.01
PABPC1-210ENST00000519363 RALGAPBQ86X10 1494 aa21.35■■□□□ 1.01
PABPC1-210ENST00000519363 MADDQ8WXG6 1647 aa21.34■■□□□ 1.01
PABPC1-210ENST00000519363 PPLO60437 1756 aa21.34■■□□□ 1.01
PABPC1-210ENST00000519363 ESF1Q9H501 851 aaKnown RBP21.34■■□□□ 1.01
PABPC1-210ENST00000519363 PRAG1Q86YV5 1406 aa21.34■■□□□ 1.01
PABPC1-210ENST00000519363 ZMYM3Q14202 1370 aa21.34■■□□□ 1.01
PABPC1-210ENST00000519363 C3P01024 1663 aa21.34■■□□□ 1.01
PABPC1-210ENST00000519363 TRPM1Q7Z4N2 1603 aa21.33■■□□□ 1.01
PABPC1-210ENST00000519363 MYOM2P54296 1465 aa21.33■■□□□ 1.01
PABPC1-210ENST00000519363 STAC3Q96MF2 364 aa21.33■■□□□ 1.01
PABPC1-210ENST00000519363 SLC52A1Q9NWF4 448 aa21.33■■□□□ 1.01
PABPC1-210ENST00000519363 ADAMTSL3P82987 1691 aa21.33■■□□□ 1
PABPC1-210ENST00000519363 TMEM131LA2VDJ0 1609 aa21.33■■□□□ 1
PABPC1-210ENST00000519363 NBPF8Q3BBV2 869 aa21.31■■□□□ 1
PABPC1-210ENST00000519363 KDM5AP29375 1690 aaKnown RBP21.31■■□□□ 1
PABPC1-210ENST00000519363 LAMC1P11047 1609 aa21.3■■□□□ 1
PABPC1-210ENST00000519363 MYO5BQ9ULV0 1848 aa21.3■■□□□ 1
PABPC1-210ENST00000519363 KIAA1210Q9ULL0 1709 aa21.29■■□□□ 1
PABPC1-210ENST00000519363 ZNF316A6NFI3 1004 aaPredicted RBP21.29■■□□□ 1
PABPC1-210ENST00000519363 DCAF11Q8TEB1 546 aa21.29■■□□□ 1
PABPC1-210ENST00000519363 RGL3Q3MIN7 710 aa21.28■■□□□ 1
PABPC1-210ENST00000519363 NRXN1Q9ULB1 1477 aa21.27■■□□□ 1
PABPC1-210ENST00000519363 NEXMIFQ5QGS0 1516 aa21.26■□□□□ 0.99
PABPC1-210ENST00000519363 RIMS1Q86UR5 1692 aaKnown RBP21.26■□□□□ 0.99
PABPC1-210ENST00000519363 FBXO31Q5XUX0 539 aaPredicted RBP21.26■□□□□ 0.99
PABPC1-210ENST00000519363 RPGRIP1LQ68CZ1 1315 aa21.25■□□□□ 0.99
PABPC1-210ENST00000519363 TNRQ92752 1358 aa21.23■□□□□ 0.99
PABPC1-210ENST00000519363 IDI1Q13907 227 aa21.23■□□□□ 0.99
PABPC1-210ENST00000519363 GPRASP1Q5JY77 1395 aa21.23■□□□□ 0.99
PABPC1-210ENST00000519363 NLRP1Q9C000 1473 aa21.21■□□□□ 0.99
PABPC1-210ENST00000519363 KDM2AQ9Y2K7 1162 aa21.21■□□□□ 0.99
PABPC1-210ENST00000519363 ZFYVE9O95405 1425 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms