RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-210ENST00000519362 CNTLNQ9NXG0 1405 aa17.32■□□□□ 0.36
SPIDR-210ENST00000519362 SPAG9O60271 1321 aaKnown RBP17.3■□□□□ 0.36
SPIDR-210ENST00000519362 ATP10AO60312 1499 aa17.3■□□□□ 0.36
SPIDR-210ENST00000519362 KDM5CP41229 1560 aa17.3■□□□□ 0.36
SPIDR-210ENST00000519362 AFAP1Q8N556 730 aa17.29■□□□□ 0.36
SPIDR-210ENST00000519362 CCDC144AA2RUR9 1427 aa17.29■□□□□ 0.36
SPIDR-210ENST00000519362 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.28■□□□□ 0.361e-6■■■■□ 21
SPIDR-210ENST00000519362 INO80Q9ULG1 1556 aaPredicted RBP17.28■□□□□ 0.36
SPIDR-210ENST00000519362 USP47Q96K76 1375 aa17.28■□□□□ 0.36
SPIDR-210ENST00000519362 KIF7Q2M1P5 1343 aa17.27■□□□□ 0.36
SPIDR-210ENST00000519362 ZNF326Q5BKZ1 582 aaKnown RBP17.26■□□□□ 0.35
SPIDR-210ENST00000519362 ATP7AQ04656 1500 aa17.25■□□□□ 0.35
SPIDR-210ENST00000519362 ADGRL1O94910 1474 aa17.25■□□□□ 0.35
SPIDR-210ENST00000519362 DEPDC5O75140 1603 aa17.25■□□□□ 0.35
SPIDR-210ENST00000519362 BCORL1Q5H9F3 1711 aa17.24■□□□□ 0.35
SPIDR-210ENST00000519362 DCAF11Q8TEB1 546 aa17.24■□□□□ 0.35
SPIDR-210ENST00000519362 SCAPERQ9BY12 1400 aa17.23■□□□□ 0.35
SPIDR-210ENST00000519362 NPM1P06748 294 aaKnown RBP eCLIP17.22■□□□□ 0.35
SPIDR-210ENST00000519362 PRAG1Q86YV5 1406 aa17.22■□□□□ 0.35
SPIDR-210ENST00000519362 ARID4BQ4LE39 1312 aaPredicted RBP17.21■□□□□ 0.35
SPIDR-210ENST00000519362 KDM2AQ9Y2K7 1162 aa17.21■□□□□ 0.35
SPIDR-210ENST00000519362 A2MP01023 1474 aa17.21■□□□□ 0.34
SPIDR-210ENST00000519362 TRPM1Q7Z4N2 1603 aa17.2■□□□□ 0.34
SPIDR-210ENST00000519362 CARD11Q9BXL7 1154 aa17.19■□□□□ 0.34
SPIDR-210ENST00000519362 VWDEQ8N2E2 1590 aa17.19■□□□□ 0.34
SPIDR-210ENST00000519362 E9PCH4 1651 aa17.19■□□□□ 0.34
SPIDR-210ENST00000519362 EIF2AK4Q9P2K8 1649 aaKnown RBP17.19■□□□□ 0.34
SPIDR-210ENST00000519362 DHX29Q7Z478 1369 aaKnown RBP17.17■□□□□ 0.34
SPIDR-210ENST00000519362 CYB5RLQ6IPT4 315 aa17.17■□□□□ 0.34
SPIDR-210ENST00000519362 PRKRIP1Q9H875 184 aaPredicted RBP17.17■□□□□ 0.34
SPIDR-210ENST00000519362 CFAP74Q9C0B2 1584 aa17.16■□□□□ 0.34
SPIDR-210ENST00000519362 TET3O43151 1660 aa17.16■□□□□ 0.34
SPIDR-210ENST00000519362 KIDINS220Q9ULH0 1771 aa17.16■□□□□ 0.34
SPIDR-210ENST00000519362 ZNF518AQ6AHZ1 1483 aa17.16■□□□□ 0.34
SPIDR-210ENST00000519362 TRPM2O94759 1503 aa17.16■□□□□ 0.34
SPIDR-210ENST00000519362 ROCK2O75116 1388 aaKnown RBP17.15■□□□□ 0.34
SPIDR-210ENST00000519362 PTPRTO14522 1441 aa17.15■□□□□ 0.34
SPIDR-210ENST00000519362 PRDM15P57071 1507 aaPredicted RBP17.15■□□□□ 0.34
SPIDR-210ENST00000519362 GPRASP1Q5JY77 1395 aa17.15■□□□□ 0.34
SPIDR-210ENST00000519362 CD109Q6YHK3 1445 aa17.15■□□□□ 0.34
SPIDR-210ENST00000519362 RGL3Q3MIN7 710 aa17.14■□□□□ 0.34
SPIDR-210ENST00000519362 LAMC1P11047 1609 aa17.14■□□□□ 0.33
SPIDR-210ENST00000519362 MROH1Q8NDA8 1641 aa17.14■□□□□ 0.33
SPIDR-210ENST00000519362 SPHKAPQ2M3C7 1700 aa17.13■□□□□ 0.33
SPIDR-210ENST00000519362 ST20-MTHFSA0A0A6YYL1 179 aa17.12■□□□□ 0.33
SPIDR-210ENST00000519362 KANK1Q14678 1352 aa17.12■□□□□ 0.33
SPIDR-210ENST00000519362 POGZQ7Z3K3 1410 aa17.11■□□□□ 0.33
SPIDR-210ENST00000519362 CEP152O94986 1710 aa17.1■□□□□ 0.33
SPIDR-210ENST00000519362 KIF3BO15066 747 aa17.1■□□□□ 0.33
SPIDR-210ENST00000519362 MLH3Q9UHC1 1453 aa17.09■□□□□ 0.33
SPIDR-210ENST00000519362 CLTCL1P53675 1640 aa17.09■□□□□ 0.33
SPIDR-210ENST00000519362 NBPF1Q3BBV0 1214 aa17.08■□□□□ 0.33
SPIDR-210ENST00000519362 MYT1LQ9UL68 1186 aa17.07■□□□□ 0.32
SPIDR-210ENST00000519362 RNF17Q9BXT8 1623 aaKnown RBP17.07■□□□□ 0.32
SPIDR-210ENST00000519362 NEURL4Q96JN8 1562 aa17.07■□□□□ 0.32
SPIDR-210ENST00000519362 CCDC184Q52MB2 194 aa17.07■□□□□ 0.32
SPIDR-210ENST00000519362 NEO1Q92859 1461 aa17.07■□□□□ 0.32
SPIDR-210ENST00000519362 LMTK2Q8IWU2 1503 aa17.06■□□□□ 0.32
SPIDR-210ENST00000519362 HECW2Q9P2P5 1572 aa17.05■□□□□ 0.32
SPIDR-210ENST00000519362 EFCAB6Q5THR3 1501 aa17.05■□□□□ 0.32
SPIDR-210ENST00000519362 MADDQ8WXG6 1647 aa17.05■□□□□ 0.32
SPIDR-210ENST00000519362 SUPT16HQ9Y5B9 1047 aaKnown RBP17.05■□□□□ 0.32
SPIDR-210ENST00000519362 FRMPD1Q5SYB0 1578 aa17.05■□□□□ 0.32
SPIDR-210ENST00000519362 STAC3Q96MF2 364 aa17.04■□□□□ 0.32
SPIDR-210ENST00000519362 POLR3GLQ9BT43 218 aa17.03■□□□□ 0.32
SPIDR-210ENST00000519362 PPRC1Q5VV67 1664 aaKnown RBP17.02■□□□□ 0.31
SPIDR-210ENST00000519362 MRS2Q9HD23 443 aa17■□□□□ 0.31
SPIDR-210ENST00000519362 MAP3K4Q9Y6R4 1608 aa17■□□□□ 0.31
SPIDR-210ENST00000519362 COL17A1Q9UMD9 1497 aaPredicted RBP17■□□□□ 0.31
SPIDR-210ENST00000519362 ABCA6Q8N139 1617 aa17■□□□□ 0.31
SPIDR-210ENST00000519362 HNRNPUQ00839 825 aaKnown RBP eCLIP17■□□□□ 0.31
SPIDR-210ENST00000519362 TESK2Q96S53 571 aa17■□□□□ 0.31
SPIDR-210ENST00000519362 GLI2P10070 1586 aa16.98■□□□□ 0.31
SPIDR-210ENST00000519362 IQGAP1P46940 1657 aa16.97■□□□□ 0.31
SPIDR-210ENST00000519362 UGGT1Q9NYU2 1555 aa16.96■□□□□ 0.31
SPIDR-210ENST00000519362 RICTORQ6R327 1708 aa16.95■□□□□ 0.3
SPIDR-210ENST00000519362 KIAA1210Q9ULL0 1709 aa16.95■□□□□ 0.3
SPIDR-210ENST00000519362 KTN1Q86UP2 1357 aaKnown RBP16.95■□□□□ 0.3
SPIDR-210ENST00000519362 MYOM2P54296 1465 aa16.95■□□□□ 0.3
SPIDR-210ENST00000519362 KIF1BO60333 1816 aa16.94■□□□□ 0.3
SPIDR-210ENST00000519362 DISP3Q9P2K9 1392 aa16.94■□□□□ 0.3
SPIDR-210ENST00000519362 DIP2CQ9Y2E4 1556 aa16.94■□□□□ 0.3
SPIDR-210ENST00000519362 RAPGEF3O95398 923 aa16.93■□□□□ 0.3
SPIDR-210ENST00000519362 FAM9BQ8IZU0 186 aa16.93■□□□□ 0.3
SPIDR-210ENST00000519362 IFT172Q9UG01 1749 aa16.93■□□□□ 0.3
SPIDR-210ENST00000519362 NPATQ14207 1427 aa16.92■□□□□ 0.3
SPIDR-210ENST00000519362 TRHP20396 242 aaPredicted RBP16.92■□□□□ 0.3
SPIDR-210ENST00000519362 ABCC3O15438 1527 aa16.92■□□□□ 0.3
SPIDR-210ENST00000519362 SCAF11Q99590 1463 aaKnown RBP16.92■□□□□ 0.3
SPIDR-210ENST00000519362 MROH2AA6NES4 1674 aa16.91■□□□□ 0.3
SPIDR-210ENST00000519362 ADGRB3O60242 1522 aa16.9■□□□□ 0.3
SPIDR-210ENST00000519362 PER1O15534 1290 aaPredicted RBP16.9■□□□□ 0.3
SPIDR-210ENST00000519362 TMF1P82094 1093 aa16.9■□□□□ 0.3
SPIDR-210ENST00000519362 RALBP1Q15311 655 aa16.9■□□□□ 0.3
SPIDR-210ENST00000519362 ZBED9Q6R2W3 1325 aa16.89■□□□□ 0.3
SPIDR-210ENST00000519362 NRXN1Q9ULB1 1477 aa16.89■□□□□ 0.29
SPIDR-210ENST00000519362 GGT6Q6P531 493 aa16.89■□□□□ 0.29
SPIDR-210ENST00000519362 CAMSAP1Q5T5Y3 1602 aa16.87■□□□□ 0.29
SPIDR-210ENST00000519362 DIP2BQ9P265 1576 aa16.87■□□□□ 0.29
SPIDR-210ENST00000519362 MYBBP1AQ9BQG0 1328 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms