RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 RNF17Q9BXT8 1623 aaKnown RBP11.59□□□□□ -0.55
SDCBP-206ENST00000519115 EIF2AK4Q9P2K8 1649 aaKnown RBP11.59□□□□□ -0.55
SDCBP-206ENST00000519115 DUOX2Q9NRD8 1548 aa11.59□□□□□ -0.55
SDCBP-206ENST00000519115 KIF15Q9NS87 1388 aa11.58□□□□□ -0.56
SDCBP-206ENST00000519115 KIF3BO15066 747 aa11.58□□□□□ -0.56
SDCBP-206ENST00000519115 GGT6Q6P531 493 aa11.58□□□□□ -0.56
SDCBP-206ENST00000519115 CEBPAP49715 358 aaPredicted RBP11.57□□□□□ -0.56
SDCBP-206ENST00000519115 ESF1Q9H501 851 aaKnown RBP11.57□□□□□ -0.56
SDCBP-206ENST00000519115 RRP7BPQ9NSQ0 103 aa11.57□□□□□ -0.56
SDCBP-206ENST00000519115 CEP152O94986 1710 aa11.57□□□□□ -0.56
SDCBP-206ENST00000519115 PTPRKQ15262 1439 aa11.56□□□□□ -0.56
SDCBP-206ENST00000519115 PPP4R3CPQ6ZMV5 832 aa11.56□□□□□ -0.56
SDCBP-206ENST00000519115 CNTLNQ9NXG0 1405 aa11.56□□□□□ -0.56
SDCBP-206ENST00000519115 MROH1Q8NDA8 1641 aa11.56□□□□□ -0.56
SDCBP-206ENST00000519115 ADGRL2O95490 1459 aa11.56□□□□□ -0.56
SDCBP-206ENST00000519115 ANKRD30AQ9BXX3 1397 aa11.55□□□□□ -0.56
SDCBP-206ENST00000519115 RRBP1Q9P2E9 1410 aaKnown RBP11.55□□□□□ -0.56
SDCBP-206ENST00000519115 ITGAEP38570 1179 aa11.55□□□□□ -0.56
SDCBP-206ENST00000519115 PREX1Q8TCU6 1659 aa11.55□□□□□ -0.56
SDCBP-206ENST00000519115 SETD1BQ9UPS6 1966 aaKnown RBP11.54□□□□□ -0.56
SDCBP-206ENST00000519115 NCOA1Q15788 1441 aa11.54□□□□□ -0.56
SDCBP-206ENST00000519115 KDM5DQ9BY66 1539 aa11.54□□□□□ -0.56
SDCBP-206ENST00000519115 DEPDC5O75140 1603 aa11.53□□□□□ -0.56
SDCBP-206ENST00000519115 ERBINQ96RT1 1412 aa11.53□□□□□ -0.56
SDCBP-206ENST00000519115 ZC3H13Q5T200 1668 aaKnown RBP11.53□□□□□ -0.56
SDCBP-206ENST00000519115 CFAP65Q6ZU64 1925 aaKnown RBP11.53□□□□□ -0.56
SDCBP-206ENST00000519115 SCAF1Q9H7N4 1312 aaKnown RBP11.53□□□□□ -0.56
SDCBP-206ENST00000519115 FAM135AQ9P2D6 1515 aa11.52□□□□□ -0.57
SDCBP-206ENST00000519115 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.52□□□□□ -0.57
SDCBP-206ENST00000519115 ABCC3O15438 1527 aa11.51□□□□□ -0.57
SDCBP-206ENST00000519115 PRDM15P57071 1507 aaPredicted RBP11.51□□□□□ -0.57
SDCBP-206ENST00000519115 CAMSAP1Q5T5Y3 1602 aa11.51□□□□□ -0.57
SDCBP-206ENST00000519115 ZMYM3Q14202 1370 aa11.51□□□□□ -0.57
SDCBP-206ENST00000519115 MYO3AQ8NEV4 1616 aa11.49□□□□□ -0.57
SDCBP-206ENST00000519115 ILDR2Q71H61 639 aa11.49□□□□□ -0.57
SDCBP-206ENST00000519115 WASHC2CQ9Y4E1 1318 aa11.49□□□□□ -0.57
SDCBP-206ENST00000519115 ANKRD50Q9ULJ7 1429 aa11.49□□□□□ -0.57
SDCBP-206ENST00000519115 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.48□□□□□ -0.57
SDCBP-206ENST00000519115 ROCK1Q13464 1354 aa11.48□□□□□ -0.57
SDCBP-206ENST00000519115 GCC2Q8IWJ2 1684 aa11.47□□□□□ -0.57
SDCBP-206ENST00000519115 PZPP20742 1482 aa11.47□□□□□ -0.57
SDCBP-206ENST00000519115 NPATQ14207 1427 aa11.47□□□□□ -0.57
SDCBP-206ENST00000519115 UHRF1BP1Q6BDS2 1440 aa11.47□□□□□ -0.57
SDCBP-206ENST00000519115 HSPA2P54652 639 aa11.47□□□□□ -0.57
SDCBP-206ENST00000519115 MAPK8IP2Q13387 824 aaPredicted RBP11.47□□□□□ -0.57
SDCBP-206ENST00000519115 ZNF142P52746 1687 aaPredicted RBP11.46□□□□□ -0.57
SDCBP-206ENST00000519115 UNC13BO14795 1591 aa11.46□□□□□ -0.57
SDCBP-206ENST00000519115 VWDEQ8N2E2 1590 aa11.45□□□□□ -0.58
SDCBP-206ENST00000519115 KANK1Q14678 1352 aa11.44□□□□□ -0.58
SDCBP-206ENST00000519115 FBXO31Q5XUX0 539 aaPredicted RBP11.44□□□□□ -0.58
SDCBP-206ENST00000519115 CEP170BQ9Y4F5 1589 aaPredicted RBP11.44□□□□□ -0.58
SDCBP-206ENST00000519115 ERVK-7P63135 1459 aa11.43□□□□□ -0.58
SDCBP-206ENST00000519115 TET3O43151 1660 aa11.43□□□□□ -0.58
SDCBP-206ENST00000519115 TNRQ92752 1358 aa11.42□□□□□ -0.58
SDCBP-206ENST00000519115 SPATA31D1Q6ZQQ2 1576 aa11.42□□□□□ -0.58
SDCBP-206ENST00000519115 EFCAB6Q5THR3 1501 aa11.42□□□□□ -0.58
SDCBP-206ENST00000519115 IQGAP3Q86VI3 1631 aa11.42□□□□□ -0.58
SDCBP-206ENST00000519115 STRCQ7RTU9 1775 aa11.41□□□□□ -0.58
SDCBP-206ENST00000519115 LMTK2Q8IWU2 1503 aa11.41□□□□□ -0.58
SDCBP-206ENST00000519115 NAIPQ13075 1403 aa11.41□□□□□ -0.58
SDCBP-206ENST00000519115 E9PCH4 1651 aa11.4□□□□□ -0.59
SDCBP-206ENST00000519115 A2ML1A8K2U0 1454 aa11.39□□□□□ -0.59
SDCBP-206ENST00000519115 HFM1A2PYH4 1435 aa11.39□□□□□ -0.59
SDCBP-206ENST00000519115 ARHGAP31Q2M1Z3 1444 aa11.39□□□□□ -0.59
SDCBP-206ENST00000519115 PCGF6Q9BYE7 350 aa11.39□□□□□ -0.59
SDCBP-206ENST00000519115 SYNMO15061 1565 aa11.37□□□□□ -0.59
SDCBP-206ENST00000519115 NUP155O75694 1391 aa11.37□□□□□ -0.59
SDCBP-206ENST00000519115 UBR1Q8IWV7 1749 aa11.37□□□□□ -0.59
SDCBP-206ENST00000519115 NLRP1Q9C000 1473 aa11.37□□□□□ -0.59
SDCBP-206ENST00000519115 PIK3C2BO00750 1634 aa11.36□□□□□ -0.59
SDCBP-206ENST00000519115 POLR1AO95602 1720 aaPredicted RBP11.36□□□□□ -0.59
SDCBP-206ENST00000519115 UGGT1Q9NYU2 1555 aa11.36□□□□□ -0.59
SDCBP-206ENST00000519115 MYO5BQ9ULV0 1848 aa11.35□□□□□ -0.59
SDCBP-206ENST00000519115 RPRD2Q5VT52 1461 aaKnown RBP11.34□□□□□ -0.59
SDCBP-206ENST00000519115 SPHKAPQ2M3C7 1700 aa11.34□□□□□ -0.59
SDCBP-206ENST00000519115 NOS1P29475 1434 aa11.34□□□□□ -0.59
SDCBP-206ENST00000519115 ACIN1Q9UKV3 1341 aaKnown RBP11.34□□□□□ -0.59
SDCBP-206ENST00000519115 PLA2R1Q13018 1463 aa11.33□□□□□ -0.6
SDCBP-206ENST00000519115 HRCP23327 699 aa11.33□□□□□ -0.6
SDCBP-206ENST00000519115 TRIM52Q96A61 297 aa11.31□□□□□ -0.6
SDCBP-206ENST00000519115 DMRT2Q9Y5R5 561 aa11.31□□□□□ -0.6
SDCBP-206ENST00000519115 NEURL4Q96JN8 1562 aa11.31□□□□□ -0.6
SDCBP-206ENST00000519115 NCKAP5LQ9HCH0 1330 aa11.31□□□□□ -0.6
SDCBP-206ENST00000519115 KDM5AP29375 1690 aaKnown RBP11.3□□□□□ -0.6
SDCBP-206ENST00000519115 ADGRB3O60242 1522 aa11.3□□□□□ -0.6
SDCBP-206ENST00000519115 FBXO41Q8TF61 875 aa11.29□□□□□ -0.6
SDCBP-206ENST00000519115 SETD5Q9C0A6 1442 aa11.28□□□□□ -0.6
SDCBP-206ENST00000519115 IDI1Q13907 227 aa11.28□□□□□ -0.6
SDCBP-206ENST00000519115 THEMISQ8N1K5 641 aaPredicted RBP11.28□□□□□ -0.6
SDCBP-206ENST00000519115 PTPRTO14522 1441 aa11.27□□□□□ -0.6
SDCBP-206ENST00000519115 IQGAP1P46940 1657 aa11.27□□□□□ -0.6
SDCBP-206ENST00000519115 STAG3Q9UJ98 1225 aa11.27□□□□□ -0.61
SDCBP-206ENST00000519115 TMEM131LA2VDJ0 1609 aa11.27□□□□□ -0.61
SDCBP-206ENST00000519115 CLTCL1P53675 1640 aa11.27□□□□□ -0.61
SDCBP-206ENST00000519115 SLIT1O75093 1534 aa11.26□□□□□ -0.61
SDCBP-206ENST00000519115 PKD2Q13563 968 aa11.26□□□□□ -0.61
SDCBP-206ENST00000519115 CNKSR2Q8WXI2 1034 aa11.26□□□□□ -0.61
SDCBP-206ENST00000519115 RAB3GAP2Q9H2M9 1393 aa11.26□□□□□ -0.61
SDCBP-206ENST00000519115 ARHGAP23Q9P227 1491 aa11.25□□□□□ -0.61
SDCBP-206ENST00000519115 TRPM2O94759 1503 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms