RNA–Protein interactions for RNA: ENST00000519100.5

PABPC1-209, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-209ENST00000519100 SPDYE16A6NNV3 312 aaPredicted RBP8.14□□□□□ -1.11
PABPC1-209ENST00000519100 SEMA3EO15041 775 aa8.14□□□□□ -1.11
PABPC1-209ENST00000519100 STAC3Q96MF2 364 aa8.14□□□□□ -1.11
PABPC1-209ENST00000519100 ADAM33Q9BZ11 813 aa8.14□□□□□ -1.11
PABPC1-209ENST00000519100 BCL2L12Q9HB09 334 aa8.14□□□□□ -1.11
PABPC1-209ENST00000519100 PHF14O94880 888 aa8.12□□□□□ -1.11
PABPC1-209ENST00000519100 VPS9D1Q9Y2B5 631 aa8.12□□□□□ -1.11
PABPC1-209ENST00000519100 KCTD12Q96CX2 325 aaKnown RBP8.11□□□□□ -1.11
PABPC1-209ENST00000519100 OSBPP22059 807 aa8.1□□□□□ -1.11
PABPC1-209ENST00000519100 PTPREP23469 700 aa8.1□□□□□ -1.11
PABPC1-209ENST00000519100 ZDHHC16Q969W1 377 aa8.1□□□□□ -1.11
PABPC1-209ENST00000519100 PLA2G2EQ9NZK7 142 aa8.1□□□□□ -1.11
PABPC1-209ENST00000519100 TESPA1A2RU30 521 aaPredicted RBP8.09□□□□□ -1.11
PABPC1-209ENST00000519100 GRXCR2A6NFK2 248 aa8.09□□□□□ -1.11
PABPC1-209ENST00000519100 SLC4A5Q9BY07 1137 aa8.09□□□□□ -1.11
PABPC1-209ENST00000519100 NBR1Q14596 966 aa8.08□□□□□ -1.12
PABPC1-209ENST00000519100 EN1Q05925 392 aaPredicted RBP8.07□□□□□ -1.12
PABPC1-209ENST00000519100 TSR1Q2NL82 804 aaKnown RBP8.07□□□□□ -1.12
PABPC1-209ENST00000519100 TYW1BQ6NUM6 668 aa8.07□□□□□ -1.12
PABPC1-209ENST00000519100 ZBED2Q9BTP6 218 aa8.07□□□□□ -1.12
PABPC1-209ENST00000519100 CDHR5Q9HBB8 845 aa8.07□□□□□ -1.12
PABPC1-209ENST00000519100 COL9A1P20849 921 aa8.06□□□□□ -1.12
PABPC1-209ENST00000519100 RBM33Q96EV2 1170 aaKnown RBP8.06□□□□□ -1.12
PABPC1-209ENST00000519100 EPAS1Q99814 870 aa8.06□□□□□ -1.12
PABPC1-209ENST00000519100 BHMG1C9JSJ3 638 aaPredicted RBP8.05□□□□□ -1.12
PABPC1-209ENST00000519100 FBXW7Q969H0 707 aa8.04□□□□□ -1.12
PABPC1-209ENST00000519100 PTPN5P54829 565 aa8.03□□□□□ -1.12
PABPC1-209ENST00000519100 C6orf132Q5T0Z8 1188 aa8.02□□□□□ -1.13
PABPC1-209ENST00000519100 GOLGA8CPA6NN73 597 aa8.01□□□□□ -1.13
PABPC1-209ENST00000519100 RBM26Q5T8P6 1007 aaKnown RBP8.01□□□□□ -1.13
PABPC1-209ENST00000519100 MRPL50Q8N5N7 158 aaKnown RBP8.01□□□□□ -1.13
PABPC1-209ENST00000519100 GPR37O15354 613 aa8□□□□□ -1.13
PABPC1-209ENST00000519100 MAP3K7O43318 606 aa8□□□□□ -1.13
PABPC1-209ENST00000519100 NPDC1Q9NQX5 325 aaPredicted RBP8□□□□□ -1.13
PABPC1-209ENST00000519100 PPP1R3GB7ZBB8 358 aa7.99□□□□□ -1.13
PABPC1-209ENST00000519100 PROX2Q3B8N5 592 aa7.99□□□□□ -1.13
PABPC1-209ENST00000519100 THSD4Q6ZMP0 1018 aa7.99□□□□□ -1.13
PABPC1-209ENST00000519100 WNT2BQ93097 391 aa7.99□□□□□ -1.13
PABPC1-209ENST00000519100 FAM198AQ9UFP1 575 aa7.99□□□□□ -1.13
PABPC1-209ENST00000519100 C3orf80F5H4A9 247 aa7.98□□□□□ -1.13
PABPC1-209ENST00000519100 NBPF3Q9H094 633 aa7.98□□□□□ -1.13
PABPC1-209ENST00000519100 RABGEF1Q9UJ41 708 aa7.96□□□□□ -1.14
PABPC1-209ENST00000519100 TSKSQ9UJT2 592 aa7.95□□□□□ -1.14
PABPC1-209ENST00000519100 PTGDRQ13258 359 aa7.93□□□□□ -1.14
PABPC1-209ENST00000519100 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.92□□□□□ -1.14
PABPC1-209ENST00000519100 TTC13Q8NBP0 860 aa7.92□□□□□ -1.14
PABPC1-209ENST00000519100 KIAA1468Q9P260 1216 aa7.92□□□□□ -1.14
PABPC1-209ENST00000519100 TRIM6-TRIM34B2RNG4 842 aa7.91□□□□□ -1.14
PABPC1-209ENST00000519100 PADI6Q6TGC4 694 aa7.91□□□□□ -1.14
PABPC1-209ENST00000519100 ANKK1Q8NFD2 765 aa7.91□□□□□ -1.14
PABPC1-209ENST00000519100 NUTM2FA1L443 756 aa7.9□□□□□ -1.14
PABPC1-209ENST00000519100 FECHP22830 423 aa7.9□□□□□ -1.14
PABPC1-209ENST00000519100 PRSS12P56730 875 aa7.9□□□□□ -1.14
PABPC1-209ENST00000519100 IFFO2Q5TF58 517 aa7.9□□□□□ -1.14
PABPC1-209ENST00000519100 LAPTM4BQ86VI4 370 aa7.9□□□□□ -1.14
PABPC1-209ENST00000519100 CDCA7LQ96GN5 454 aa7.9□□□□□ -1.14
PABPC1-209ENST00000519100 ONECUT3O60422 494 aaPredicted RBP7.89□□□□□ -1.15
PABPC1-209ENST00000519100 LMOD2Q6P5Q4 547 aa7.89□□□□□ -1.15
PABPC1-209ENST00000519100 SMYD5Q6GMV2 418 aa7.88□□□□□ -1.15
PABPC1-209ENST00000519100 BCAMP50895 628 aa7.87□□□□□ -1.15
PABPC1-209ENST00000519100 GPIHBP1Q8IV16 184 aa7.87□□□□□ -1.15
PABPC1-209ENST00000519100 CERKQ8TCT0 537 aa7.87□□□□□ -1.15
PABPC1-209ENST00000519100 ZFRQ96KR1 1074 aaKnown RBP7.87□□□□□ -1.15
PABPC1-209ENST00000519100 RBM27Q9P2N5 1060 aaKnown RBP7.87□□□□□ -1.15
PABPC1-209ENST00000519100 SEPT9Q9UHD8 586 aaPredicted RBP7.87□□□□□ -1.15
PABPC1-209ENST00000519100 SOWAHBA6NEL2 793 aa7.86□□□□□ -1.15
PABPC1-209ENST00000519100 SMAPO00193 183 aa7.86□□□□□ -1.15
PABPC1-209ENST00000519100 FAM161AQ3B820 660 aa7.86□□□□□ -1.15
PABPC1-209ENST00000519100 FCHSD2O94868 740 aa7.85□□□□□ -1.15
PABPC1-209ENST00000519100 A0A0G2JS52 829 aa7.84□□□□□ -1.15
PABPC1-209ENST00000519100 GNPATO15228 680 aa7.83□□□□□ -1.16
PABPC1-209ENST00000519100 RGS20O76081 388 aa7.83□□□□□ -1.16
PABPC1-209ENST00000519100 HIC1Q14526 733 aa7.83□□□□□ -1.16
PABPC1-209ENST00000519100 FAM98CQ17RN3 349 aaKnown RBP7.83□□□□□ -1.16
PABPC1-209ENST00000519100 BCANQ96GW7 911 aa7.83□□□□□ -1.16
PABPC1-209ENST00000519100 NUDT18Q6ZVK8 323 aa7.82□□□□□ -1.16
PABPC1-209ENST00000519100 TATDN2Q93075 761 aa7.82□□□□□ -1.16
PABPC1-209ENST00000519100 WBP1LQ9NX94 342 aa7.82□□□□□ -1.16
PABPC1-209ENST00000519100 PNMA3Q9UL41 463 aa7.82□□□□□ -1.16
PABPC1-209ENST00000519100 ADGRG1Q9Y653 693 aa7.82□□□□□ -1.16
PABPC1-209ENST00000519100 ITGBL1O95965 494 aaPredicted RBP7.81□□□□□ -1.16
PABPC1-209ENST00000519100 NYAP1Q6ZVC0 841 aa7.81□□□□□ -1.16
PABPC1-209ENST00000519100 PACS2Q86VP3 889 aa7.81□□□□□ -1.16
PABPC1-209ENST00000519100 EYA1Q99502 592 aa7.81□□□□□ -1.16
PABPC1-209ENST00000519100 ZC3H15Q8WU90 426 aaKnown RBP7.8□□□□□ -1.16
PABPC1-209ENST00000519100 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.8□□□□□ -1.16
PABPC1-209ENST00000519100 NBPF26B4DH59 902 aa7.79□□□□□ -1.16
PABPC1-209ENST00000519100 LRCH3Q96II8 777 aa7.79□□□□□ -1.16
PABPC1-209ENST00000519100 PHOX2BQ99453 314 aa7.79□□□□□ -1.16
PABPC1-209ENST00000519100 TSR3Q9UJK0 312 aaKnown RBP7.78□□□□□ -1.16
PABPC1-209ENST00000519100 ZMYND10O75800 440 aa7.77□□□□□ -1.17
PABPC1-209ENST00000519100 PXYLP1Q8TE99 480 aa7.77□□□□□ -1.17
PABPC1-209ENST00000519100 NLRP7Q8WX94 980 aa7.77□□□□□ -1.17
PABPC1-209ENST00000519100 HPS5Q9UPZ3 1129 aa7.77□□□□□ -1.17
PABPC1-209ENST00000519100 TULP1O00294 542 aaPredicted RBP7.76□□□□□ -1.17
PABPC1-209ENST00000519100 KCNC4Q03721 635 aa7.75□□□□□ -1.17
PABPC1-209ENST00000519100 MAP2K5Q13163 448 aa7.75□□□□□ -1.17
PABPC1-209ENST00000519100 BARGINQ6ZT62 677 aa7.75□□□□□ -1.17
PABPC1-209ENST00000519100 METTL3Q86U44 580 aaKnown RBP7.75□□□□□ -1.17
PABPC1-209ENST00000519100 CCDC102AQ96A19 550 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms