RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 TONSLQ96HA7 1378 aa21.79■■□□□ 1.08
TRAPPC9-205ENST00000518839 PKD2Q13563 968 aa21.76■■□□□ 1.07
TRAPPC9-205ENST00000518839 A2MP01023 1474 aa21.76■■□□□ 1.07
TRAPPC9-205ENST00000518839 ZMYM4Q5VZL5 1548 aa21.75■■□□□ 1.07
TRAPPC9-205ENST00000518839 BCORL1Q5H9F3 1711 aa21.75■■□□□ 1.07
TRAPPC9-205ENST00000518839 ABCA6Q8N139 1617 aa21.74■■□□□ 1.07
TRAPPC9-205ENST00000518839 RPRD2Q5VT52 1461 aaKnown RBP21.74■■□□□ 1.07
TRAPPC9-205ENST00000518839 FRMPD1Q5SYB0 1578 aa21.74■■□□□ 1.07
TRAPPC9-205ENST00000518839 RNF17Q9BXT8 1623 aaKnown RBP21.72■■□□□ 1.07
TRAPPC9-205ENST00000518839 KANK1Q14678 1352 aa21.72■■□□□ 1.07
TRAPPC9-205ENST00000518839 PRDM15P57071 1507 aaPredicted RBP21.71■■□□□ 1.07
TRAPPC9-205ENST00000518839 DIP2CQ9Y2E4 1556 aa21.7■■□□□ 1.06
TRAPPC9-205ENST00000518839 FOXD1Q16676 465 aa21.7■■□□□ 1.06
TRAPPC9-205ENST00000518839 VWDEQ8N2E2 1590 aa21.7■■□□□ 1.06
TRAPPC9-205ENST00000518839 RAPGEF3O95398 923 aa21.69■■□□□ 1.06
TRAPPC9-205ENST00000518839 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.69■■□□□ 1.06
TRAPPC9-205ENST00000518839 TET3O43151 1660 aa21.69■■□□□ 1.06
TRAPPC9-205ENST00000518839 PPP1R15AO75807 674 aaPredicted RBP21.67■■□□□ 1.06
TRAPPC9-205ENST00000518839 KIF3BO15066 747 aa21.66■■□□□ 1.06
TRAPPC9-205ENST00000518839 MROH1Q8NDA8 1641 aa21.66■■□□□ 1.06
TRAPPC9-205ENST00000518839 ZNF316A6NFI3 1004 aaPredicted RBP21.63■■□□□ 1.05
TRAPPC9-205ENST00000518839 DNAJC5Q9H3Z4 198 aa21.63■■□□□ 1.05
TRAPPC9-205ENST00000518839 ATP10AO60312 1499 aa21.63■■□□□ 1.05
TRAPPC9-205ENST00000518839 REREQ9P2R6 1566 aa21.62■■□□□ 1.05
TRAPPC9-205ENST00000518839 E9PCH4 1651 aa21.62■■□□□ 1.05
TRAPPC9-205ENST00000518839 LMTK2Q8IWU2 1503 aa21.61■■□□□ 1.05
TRAPPC9-205ENST00000518839 SPHKAPQ2M3C7 1700 aa21.58■■□□□ 1.04
TRAPPC9-205ENST00000518839 CCDC144AA2RUR9 1427 aa21.57■■□□□ 1.04
TRAPPC9-205ENST00000518839 YEATS2Q9ULM3 1422 aa21.57■■□□□ 1.04
TRAPPC9-205ENST00000518839 CEP152O94986 1710 aa21.57■■□□□ 1.04
TRAPPC9-205ENST00000518839 ZC3H13Q5T200 1668 aaKnown RBP21.56■■□□□ 1.04
TRAPPC9-205ENST00000518839 EFCAB6Q5THR3 1501 aa21.55■■□□□ 1.04
TRAPPC9-205ENST00000518839 L3MBTL2Q969R5 705 aa21.55■■□□□ 1.04
TRAPPC9-205ENST00000518839 TRPM2O94759 1503 aa21.54■■□□□ 1.04
TRAPPC9-205ENST00000518839 ARHGEF40Q8TER5 1519 aa21.54■■□□□ 1.04
TRAPPC9-205ENST00000518839 AGLP35573 1532 aa21.53■■□□□ 1.04
TRAPPC9-205ENST00000518839 PLA2R1Q13018 1463 aa21.52■■□□□ 1.04
TRAPPC9-205ENST00000518839 PTPRTO14522 1441 aa21.52■■□□□ 1.04
TRAPPC9-205ENST00000518839 COL17A1Q9UMD9 1497 aaPredicted RBP21.5■■□□□ 1.03
TRAPPC9-205ENST00000518839 ABCC3O15438 1527 aa21.5■■□□□ 1.03
TRAPPC9-205ENST00000518839 CAMSAP1Q5T5Y3 1602 aa21.48■■□□□ 1.03
TRAPPC9-205ENST00000518839 GGT6Q6P531 493 aa21.47■■□□□ 1.03
TRAPPC9-205ENST00000518839 NEURL4Q96JN8 1562 aa21.45■■□□□ 1.02
TRAPPC9-205ENST00000518839 TRHP20396 242 aaPredicted RBP21.44■■□□□ 1.02
TRAPPC9-205ENST00000518839 PPP6R1Q9UPN7 881 aa21.44■■□□□ 1.02
TRAPPC9-205ENST00000518839 WASHC2CQ9Y4E1 1318 aa21.44■■□□□ 1.02
TRAPPC9-205ENST00000518839 UHRF1BP1Q6BDS2 1440 aa21.43■■□□□ 1.02
TRAPPC9-205ENST00000518839 CLTCL1P53675 1640 aa21.43■■□□□ 1.02
TRAPPC9-205ENST00000518839 KIF1BO60333 1816 aa21.42■■□□□ 1.02
TRAPPC9-205ENST00000518839 ARHGAP31Q2M1Z3 1444 aa21.42■■□□□ 1.02
TRAPPC9-205ENST00000518839 NPATQ14207 1427 aa21.39■■□□□ 1.02
TRAPPC9-205ENST00000518839 CNTLNQ9NXG0 1405 aa21.39■■□□□ 1.02
TRAPPC9-205ENST00000518839 SPATA31E1Q6ZUB1 1445 aa21.37■■□□□ 1.01
TRAPPC9-205ENST00000518839 STAC3Q96MF2 364 aa21.36■■□□□ 1.01
TRAPPC9-205ENST00000518839 NBPF8Q3BBV2 869 aa21.35■■□□□ 1.01
TRAPPC9-205ENST00000518839 DIEXFQ68CQ4 756 aaKnown RBP21.35■■□□□ 1.01
TRAPPC9-205ENST00000518839 SIGLEC1Q9BZZ2 1709 aa21.35■■□□□ 1.01
TRAPPC9-205ENST00000518839 RALGAPBQ86X10 1494 aa21.34■■□□□ 1.01
TRAPPC9-205ENST00000518839 CFAP65Q6ZU64 1925 aaKnown RBP21.34■■□□□ 1.01
TRAPPC9-205ENST00000518839 NOS1P29475 1434 aa21.33■■□□□ 1.01
TRAPPC9-205ENST00000518839 DCAF11Q8TEB1 546 aa21.33■■□□□ 1.01
TRAPPC9-205ENST00000518839 EIF4G2P78344 907 aaKnown RBP eCLIP21.31■■□□□ 1
TRAPPC9-205ENST00000518839 CLTCQ00610 1675 aaKnown RBP21.31■■□□□ 1
TRAPPC9-205ENST00000518839 PREX1Q8TCU6 1659 aa21.31■■□□□ 1
TRAPPC9-205ENST00000518839 PRAG1Q86YV5 1406 aa21.29■■□□□ 1
TRAPPC9-205ENST00000518839 PIK3C2BO00750 1634 aa21.29■■□□□ 1
TRAPPC9-205ENST00000518839 TRPM1Q7Z4N2 1603 aa21.29■■□□□ 1
TRAPPC9-205ENST00000518839 RGL3Q3MIN7 710 aa21.29■■□□□ 1
TRAPPC9-205ENST00000518839 ZNF326Q5BKZ1 582 aaKnown RBP21.27■■□□□ 1
TRAPPC9-205ENST00000518839 KDM2AQ9Y2K7 1162 aa21.27■■□□□ 1
TRAPPC9-205ENST00000518839 ADGRB3O60242 1522 aa21.27■■□□□ 1
TRAPPC9-205ENST00000518839 SYNMO15061 1565 aa21.27■□□□□ 0.99
TRAPPC9-205ENST00000518839 UGGT1Q9NYU2 1555 aa21.27■□□□□ 0.99
TRAPPC9-205ENST00000518839 IFT172Q9UG01 1749 aa21.26■□□□□ 0.99
TRAPPC9-205ENST00000518839 LAMC1P11047 1609 aa21.26■□□□□ 0.99
TRAPPC9-205ENST00000518839 MROH2AA6NES4 1674 aa21.25■□□□□ 0.99
TRAPPC9-205ENST00000518839 MADDQ8WXG6 1647 aa21.23■□□□□ 0.99
TRAPPC9-205ENST00000518839 HSPA5P11021 654 aaKnown RBP21.23■□□□□ 0.99
TRAPPC9-205ENST00000518839 MYOM2P54296 1465 aa21.23■□□□□ 0.99
TRAPPC9-205ENST00000518839 KIAA1210Q9ULL0 1709 aa21.22■□□□□ 0.99
TRAPPC9-205ENST00000518839 ESF1Q9H501 851 aaKnown RBP21.22■□□□□ 0.99
TRAPPC9-205ENST00000518839 SLC52A1Q9NWF4 448 aa21.22■□□□□ 0.99
TRAPPC9-205ENST00000518839 POLR1AO95602 1720 aaPredicted RBP21.21■□□□□ 0.99
TRAPPC9-205ENST00000518839 ERVK-7P63135 1459 aa21.21■□□□□ 0.99
TRAPPC9-205ENST00000518839 SPATA31D1Q6ZQQ2 1576 aa21.2■□□□□ 0.98
TRAPPC9-205ENST00000518839 ARID4BQ4LE39 1312 aaPredicted RBP21.2■□□□□ 0.98
TRAPPC9-205ENST00000518839 PPLO60437 1756 aa21.2■□□□□ 0.98
TRAPPC9-205ENST00000518839 RPGRIP1LQ68CZ1 1315 aa21.19■□□□□ 0.98
TRAPPC9-205ENST00000518839 ROCK2O75116 1388 aaKnown RBP21.19■□□□□ 0.98
TRAPPC9-205ENST00000518839 GPRASP1Q5JY77 1395 aa21.19■□□□□ 0.98
TRAPPC9-205ENST00000518839 MLECQ14165 292 aa21.18■□□□□ 0.98
TRAPPC9-205ENST00000518839 USP47Q96K76 1375 aa21.18■□□□□ 0.98
TRAPPC9-205ENST00000518839 CARD11Q9BXL7 1154 aa21.17■□□□□ 0.98
TRAPPC9-205ENST00000518839 HIRIP3Q9BW71 556 aaPredicted RBP21.14■□□□□ 0.97
TRAPPC9-205ENST00000518839 CHGAP10645 457 aaKnown RBP21.13■□□□□ 0.97
TRAPPC9-205ENST00000518839 NRXN1Q9ULB1 1477 aa21.13■□□□□ 0.97
TRAPPC9-205ENST00000518839 ZMYM3Q14202 1370 aa21.12■□□□□ 0.97
TRAPPC9-205ENST00000518839 TMEM131LA2VDJ0 1609 aa21.12■□□□□ 0.97
TRAPPC9-205ENST00000518839 FER1L4A9Z1Z3 1794 aa21.11■□□□□ 0.97
TRAPPC9-205ENST00000518839 MYO5BQ9ULV0 1848 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms