RNA–Protein interactions for RNA: ENST00000518711.1

SPIDR-208, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 621 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-208ENST00000518711 C1QTNF8P60827 252 aa9.36□□□□□ -0.91
SPIDR-208ENST00000518711 ARHGAP5Q13017 1502 aa9.36□□□□□ -0.91
SPIDR-208ENST00000518711 KIF14Q15058 1648 aa9.35□□□□□ -0.91
SPIDR-208ENST00000518711 RBM6P78332 1123 aaKnown RBP9.35□□□□□ -0.91
SPIDR-208ENST00000518711 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.35□□□□□ -0.91
SPIDR-208ENST00000518711 SYNMO15061 1565 aa9.34□□□□□ -0.91
SPIDR-208ENST00000518711 A2ML1A8K2U0 1454 aa9.34□□□□□ -0.91
SPIDR-208ENST00000518711 POLR1AO95602 1720 aaPredicted RBP9.34□□□□□ -0.92
SPIDR-208ENST00000518711 NPHP4O75161 1426 aaPredicted RBP9.33□□□□□ -0.92
SPIDR-208ENST00000518711 MROH2AA6NES4 1674 aa9.32□□□□□ -0.92
SPIDR-208ENST00000518711 STRCP1A6NGW2 1772 aa9.32□□□□□ -0.92
SPIDR-208ENST00000518711 KIAA1107Q9UPP5 1409 aa9.32□□□□□ -0.92
SPIDR-208ENST00000518711 DNMT1P26358 1616 aaKnown RBP9.32□□□□□ -0.92
SPIDR-208ENST00000518711 ATP1B4Q9UN42 357 aaPredicted RBP9.32□□□□□ -0.92
SPIDR-208ENST00000518711 ARHGAP35Q9NRY4 1499 aa9.32□□□□□ -0.92
SPIDR-208ENST00000518711 AFF2P51816 1311 aa9.31□□□□□ -0.92
SPIDR-208ENST00000518711 UBTFP17480 764 aaKnown RBP9.31□□□□□ -0.92
SPIDR-208ENST00000518711 HRCP23327 699 aa9.31□□□□□ -0.92
SPIDR-208ENST00000518711 QTRT2Q9H974 415 aaKnown RBP9.31□□□□□ -0.92
SPIDR-208ENST00000518711 CCDC18Q5T9S5 1454 aa9.31□□□□□ -0.92
SPIDR-208ENST00000518711 ROBO1Q9Y6N7 1651 aa9.31□□□□□ -0.92
SPIDR-208ENST00000518711 CDC42BPBQ9Y5S2 1711 aa9.31□□□□□ -0.92
SPIDR-208ENST00000518711 ABCA6Q8N139 1617 aa9.31□□□□□ -0.92
SPIDR-208ENST00000518711 ABCC1P33527 1531 aa9.31□□□□□ -0.92
SPIDR-208ENST00000518711 MED14O60244 1454 aa9.3□□□□□ -0.92
SPIDR-208ENST00000518711 ZNF784Q8NCA9 323 aaPredicted RBP9.3□□□□□ -0.92
SPIDR-208ENST00000518711 CASKIN1Q8WXD9 1431 aa9.3□□□□□ -0.92
SPIDR-208ENST00000518711 SPAG9O60271 1321 aaKnown RBP9.3□□□□□ -0.92
SPIDR-208ENST00000518711 KIDINS220Q9ULH0 1771 aa9.29□□□□□ -0.92
SPIDR-208ENST00000518711 PLEKHH2Q8IVE3 1493 aa9.29□□□□□ -0.92
SPIDR-208ENST00000518711 NHSL1Q5SYE7 1610 aa9.28□□□□□ -0.92
SPIDR-208ENST00000518711 PREX2Q70Z35 1606 aa9.28□□□□□ -0.92
SPIDR-208ENST00000518711 NGLY1Q96IV0 654 aa9.28□□□□□ -0.92
SPIDR-208ENST00000518711 PSDA5PKW4 1024 aaPredicted RBP9.27□□□□□ -0.93
SPIDR-208ENST00000518711 THEMISQ8N1K5 641 aaPredicted RBP9.27□□□□□ -0.93
SPIDR-208ENST00000518711 SAMD9LQ8IVG5 1584 aa9.27□□□□□ -0.93
SPIDR-208ENST00000518711 PHLPP1O60346 1717 aa9.27□□□□□ -0.93
SPIDR-208ENST00000518711 FGD6Q6ZV73 1430 aa9.26□□□□□ -0.93
SPIDR-208ENST00000518711 DCAF8L1A6NGE4 600 aa9.26□□□□□ -0.93
SPIDR-208ENST00000518711 ITSN2Q9NZM3 1697 aa9.26□□□□□ -0.93
SPIDR-208ENST00000518711 GPATCH8Q9UKJ3 1502 aaKnown RBP9.25□□□□□ -0.93
SPIDR-208ENST00000518711 PLXNC1O60486 1568 aa9.24□□□□□ -0.93
SPIDR-208ENST00000518711 RTEL1-TNFRSF6BF6WH68 1400 aa9.24□□□□□ -0.93
SPIDR-208ENST00000518711 A2MP01023 1474 aa9.24□□□□□ -0.93
SPIDR-208ENST00000518711 RSPH4AQ5TD94 716 aa9.24□□□□□ -0.93
SPIDR-208ENST00000518711 CFDP1Q9UEE9 299 aaPredicted RBP9.24□□□□□ -0.93
SPIDR-208ENST00000518711 FAM135AQ9P2D6 1515 aa9.24□□□□□ -0.93
SPIDR-208ENST00000518711 KDM5DQ9BY66 1539 aa9.23□□□□□ -0.93
SPIDR-208ENST00000518711 HNRNPMP52272 730 aaKnown RBP eCLIP9.23□□□□□ -0.93
SPIDR-208ENST00000518711 DEPDC5O75140 1603 aa9.23□□□□□ -0.93
SPIDR-208ENST00000518711 IQGAP1P46940 1657 aa9.23□□□□□ -0.93
SPIDR-208ENST00000518711 LRRC9Q6ZRR7 1453 aa9.22□□□□□ -0.93
SPIDR-208ENST00000518711 ATP7AQ04656 1500 aa9.22□□□□□ -0.93
SPIDR-208ENST00000518711 GGT6Q6P531 493 aa9.22□□□□□ -0.93
SPIDR-208ENST00000518711 DEFB132Q7Z7B7 95 aa9.22□□□□□ -0.93
SPIDR-208ENST00000518711 DHX29Q7Z478 1369 aaKnown RBP9.22□□□□□ -0.93
SPIDR-208ENST00000518711 CDC42BPAQ5VT25 1732 aa9.22□□□□□ -0.93
SPIDR-208ENST00000518711 XIRP1Q702N8 1843 aaKnown RBP9.21□□□□□ -0.93
SPIDR-208ENST00000518711 FYCO1Q9BQS8 1478 aa9.21□□□□□ -0.93
SPIDR-208ENST00000518711 NWD1Q149M9 1564 aa9.21□□□□□ -0.93
SPIDR-208ENST00000518711 SLAIN2Q9P270 581 aa9.21□□□□□ -0.94
SPIDR-208ENST00000518711 ZNF777Q9ULD5 760 aaPredicted RBP9.21□□□□□ -0.94
SPIDR-208ENST00000518711 COL16A1Q07092 1604 aaPredicted RBP9.2□□□□□ -0.94
SPIDR-208ENST00000518711 CLTCQ00610 1675 aaKnown RBP9.2□□□□□ -0.94
SPIDR-208ENST00000518711 LRRIQ1Q96JM4 1722 aa9.2□□□□□ -0.94
SPIDR-208ENST00000518711 CEP350Q5VT06 3117 aa9.2□□□□□ -0.94
SPIDR-208ENST00000518711 CAPN15O75808 1086 aa9.2□□□□□ -0.94
SPIDR-208ENST00000518711 EHMT2Q96KQ7 1210 aa9.2□□□□□ -0.94
SPIDR-208ENST00000518711 TMEM94Q12767 1356 aa9.2□□□□□ -0.94
SPIDR-208ENST00000518711 CCNB3Q8WWL7 1395 aa9.2□□□□□ -0.94
SPIDR-208ENST00000518711 BCL9LQ86UU0 1499 aa9.2□□□□□ -0.94
SPIDR-208ENST00000518711 INO80Q9ULG1 1556 aaPredicted RBP9.2□□□□□ -0.94
SPIDR-208ENST00000518711 C8orf37Q96NL8 207 aa9.19□□□□□ -0.94
SPIDR-208ENST00000518711 TNRQ92752 1358 aa9.19□□□□□ -0.94
SPIDR-208ENST00000518711 BLMP54132 1417 aaPredicted RBP9.19□□□□□ -0.94
SPIDR-208ENST00000518711 NLRP1Q9C000 1473 aa9.19□□□□□ -0.94
SPIDR-208ENST00000518711 SYCP2Q9BX26 1530 aa9.19□□□□□ -0.94
SPIDR-208ENST00000518711 EP400Q96L91 3159 aa9.18□□□□□ -0.94
SPIDR-208ENST00000518711 ADRA2BP18089 450 aa9.18□□□□□ -0.94
SPIDR-208ENST00000518711 PZPP20742 1482 aa9.18□□□□□ -0.94
SPIDR-208ENST00000518711 ADGBQ8N7X0 1667 aa9.18□□□□□ -0.94
SPIDR-208ENST00000518711 MIA2Q96PC5 1412 aa9.18□□□□□ -0.94
SPIDR-208ENST00000518711 MBD5Q9P267 1494 aa9.17□□□□□ -0.94
SPIDR-208ENST00000518711 SF3B2Q13435 895 aaKnown RBP9.17□□□□□ -0.94
SPIDR-208ENST00000518711 WASHC2CQ9Y4E1 1318 aa9.16□□□□□ -0.94
SPIDR-208ENST00000518711 FBXO31Q5XUX0 539 aaPredicted RBP9.15□□□□□ -0.94
SPIDR-208ENST00000518711 SHPRHQ149N8 1683 aa9.15□□□□□ -0.94
SPIDR-208ENST00000518711 KIF3BO15066 747 aa9.14□□□□□ -0.95
SPIDR-208ENST00000518711 PROSER2Q86WR7 435 aaPredicted RBP9.14□□□□□ -0.95
SPIDR-208ENST00000518711 UGGT1Q9NYU2 1555 aa9.14□□□□□ -0.95
SPIDR-208ENST00000518711 MTUS2Q5JR59 1369 aa9.13□□□□□ -0.95
SPIDR-208ENST00000518711 PRELPP51888 382 aa9.13□□□□□ -0.95
SPIDR-208ENST00000518711 CEP162Q5TB80 1403 aa9.13□□□□□ -0.95
SPIDR-208ENST00000518711 R3HDM1Q15032 1099 aaKnown RBP9.12□□□□□ -0.95
SPIDR-208ENST00000518711 TRPC5Q9UL62 973 aaPredicted RBP9.12□□□□□ -0.95
SPIDR-208ENST00000518711 MSH6P52701 1360 aa9.12□□□□□ -0.95
SPIDR-208ENST00000518711 ZNF644Q9H582 1327 aaPredicted RBP9.11□□□□□ -0.95
SPIDR-208ENST00000518711 GIGYF1O75420 1035 aaPredicted RBP9.11□□□□□ -0.95
SPIDR-208ENST00000518711 MAP3K1Q13233 1512 aa9.1□□□□□ -0.95
SPIDR-208ENST00000518711 ZC3H13Q5T200 1668 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms