RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 BBXQ8WY36 941 aaPredicted RBP12.37□□□□□ -0.43
CCDC6-203ENST00000518638 ZDHHC16Q969W1 377 aa12.37□□□□□ -0.43
CCDC6-203ENST00000518638 HMGXB3Q12766 1538 aa12.37□□□□□ -0.43
CCDC6-203ENST00000518638 ADAM33Q9BZ11 813 aa12.36□□□□□ -0.43
CCDC6-203ENST00000518638 ANO8Q9HCE9 1232 aaPredicted RBP12.36□□□□□ -0.43
CCDC6-203ENST00000518638 ITGBL1O95965 494 aaPredicted RBP12.35□□□□□ -0.43
CCDC6-203ENST00000518638 SMARCA2P51531 1590 aa12.35□□□□□ -0.43
CCDC6-203ENST00000518638 ANKK1Q8NFD2 765 aa12.34□□□□□ -0.43
CCDC6-203ENST00000518638 EVI5O60447 810 aa12.32□□□□□ -0.44
CCDC6-203ENST00000518638 Q6ZNB5 142 aa12.32□□□□□ -0.44
CCDC6-203ENST00000518638 RYDENQ9NUL5 291 aaKnown RBP12.32□□□□□ -0.44
CCDC6-203ENST00000518638 THOC2Q8NI27 1593 aaKnown RBP12.31□□□□□ -0.44
CCDC6-203ENST00000518638 ATAD2BQ9ULI0 1458 aa12.31□□□□□ -0.44
CCDC6-203ENST00000518638 PPP1R3GB7ZBB8 358 aa12.3□□□□□ -0.44
CCDC6-203ENST00000518638 NKX1-1Q15270 411 aaPredicted RBP12.3□□□□□ -0.44
CCDC6-203ENST00000518638 RABGEF1Q9UJ41 708 aa12.3□□□□□ -0.44
CCDC6-203ENST00000518638 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.28□□□□□ -0.44
CCDC6-203ENST00000518638 LAMC3Q9Y6N6 1575 aa12.27□□□□□ -0.44
CCDC6-203ENST00000518638 NESP48681 1621 aa12.26□□□□□ -0.45
CCDC6-203ENST00000518638 PDE4AP27815 886 aa12.26□□□□□ -0.45
CCDC6-203ENST00000518638 NYAP1Q6ZVC0 841 aa12.26□□□□□ -0.45
CCDC6-203ENST00000518638 BCAMP50895 628 aa12.25□□□□□ -0.45
CCDC6-203ENST00000518638 PROX2Q3B8N5 592 aa12.24□□□□□ -0.45
CCDC6-203ENST00000518638 LAPTM4BQ86VI4 370 aa12.24□□□□□ -0.45
CCDC6-203ENST00000518638 NCKAP5LQ9HCH0 1330 aa12.24□□□□□ -0.45
CCDC6-203ENST00000518638 SMARCA4P51532 1647 aa12.23□□□□□ -0.45
CCDC6-203ENST00000518638 SOWAHBA6NEL2 793 aa12.22□□□□□ -0.45
CCDC6-203ENST00000518638 BAZ1BQ9UIG0 1483 aaKnown RBP12.21□□□□□ -0.45
CCDC6-203ENST00000518638 MAP3K9P80192 1104 aa12.21□□□□□ -0.45
CCDC6-203ENST00000518638 KCNC4Q03721 635 aa12.2□□□□□ -0.46
CCDC6-203ENST00000518638 PDS5BQ9NTI5 1447 aa12.2□□□□□ -0.46
CCDC6-203ENST00000518638 GTPBP6O43824 516 aaPredicted RBP12.19□□□□□ -0.46
CCDC6-203ENST00000518638 LAPTM4AQ15012 233 aa12.19□□□□□ -0.46
CCDC6-203ENST00000518638 COL9A1P20849 921 aa12.18□□□□□ -0.46
CCDC6-203ENST00000518638 SPRYD3Q8NCJ5 442 aa12.18□□□□□ -0.46
CCDC6-203ENST00000518638 PCDHGA10Q9Y5H3 936 aa12.18□□□□□ -0.46
CCDC6-203ENST00000518638 KIF21AQ7Z4S6 1674 aa12.17□□□□□ -0.46
CCDC6-203ENST00000518638 PAXIP1Q6ZW49 1069 aaPredicted RBP12.17□□□□□ -0.46
CCDC6-203ENST00000518638 FBXW7Q969H0 707 aa12.17□□□□□ -0.46
CCDC6-203ENST00000518638 DDX27Q96GQ7 796 aaKnown RBP12.17□□□□□ -0.46
CCDC6-203ENST00000518638 ZFRQ96KR1 1074 aaKnown RBP12.17□□□□□ -0.46
CCDC6-203ENST00000518638 PLCB2Q00722 1185 aa12.16□□□□□ -0.46
CCDC6-203ENST00000518638 LARP6Q9BRS8 491 aaKnown RBP12.16□□□□□ -0.46
CCDC6-203ENST00000518638 WBP1LQ9NX94 342 aa12.16□□□□□ -0.46
CCDC6-203ENST00000518638 PEG3Q9GZU2 1588 aa12.16□□□□□ -0.46
CCDC6-203ENST00000518638 BAZ1AQ9NRL2 1556 aaPredicted RBP12.16□□□□□ -0.46
CCDC6-203ENST00000518638 TYW1BQ6NUM6 668 aa12.15□□□□□ -0.46
CCDC6-203ENST00000518638 CFAP44Q96MT7 982 aa12.15□□□□□ -0.46
CCDC6-203ENST00000518638 KIAA1468Q9P260 1216 aa12.14□□□□□ -0.47
CCDC6-203ENST00000518638 ONECUT3O60422 494 aaPredicted RBP12.12□□□□□ -0.47
CCDC6-203ENST00000518638 PHF14O94880 888 aa12.12□□□□□ -0.47
CCDC6-203ENST00000518638 MFSD10Q14728 455 aa12.11□□□□□ -0.47
CCDC6-203ENST00000518638 SEPT9Q9UHD8 586 aaPredicted RBP12.1□□□□□ -0.47
CCDC6-203ENST00000518638 MRC2Q9UBG0 1479 aa12.09□□□□□ -0.47
CCDC6-203ENST00000518638 EMILIN3Q9NT22 766 aa12.09□□□□□ -0.47
CCDC6-203ENST00000518638 WDR62O43379 1518 aa12.08□□□□□ -0.48
CCDC6-203ENST00000518638 FAM98CQ17RN3 349 aaKnown RBP12.07□□□□□ -0.48
CCDC6-203ENST00000518638 TRAF7Q6Q0C0 670 aa12.07□□□□□ -0.48
CCDC6-203ENST00000518638 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.07□□□□□ -0.48
CCDC6-203ENST00000518638 TSR3Q9UJK0 312 aaKnown RBP12.07□□□□□ -0.48
CCDC6-203ENST00000518638 GFRA3O60609 400 aa12.06□□□□□ -0.48
CCDC6-203ENST00000518638 LRCH3Q96II8 777 aa12.06□□□□□ -0.48
CCDC6-203ENST00000518638 HPS5Q9UPZ3 1129 aa12.06□□□□□ -0.48
CCDC6-203ENST00000518638 TRIM6-TRIM34B2RNG4 842 aa12.04□□□□□ -0.48
CCDC6-203ENST00000518638 LCE2BO14633 110 aa12.04□□□□□ -0.48
CCDC6-203ENST00000518638 C6orf132Q5T0Z8 1188 aa12.04□□□□□ -0.48
CCDC6-203ENST00000518638 EPAS1Q99814 870 aa12.03□□□□□ -0.48
CCDC6-203ENST00000518638 CADPSQ9ULU8 1353 aa12.03□□□□□ -0.48
CCDC6-203ENST00000518638 CEP164Q9UPV0 1460 aa11.98□□□□□ -0.49
CCDC6-203ENST00000518638 NRG2O14511 850 aaPredicted RBP11.97□□□□□ -0.49
CCDC6-203ENST00000518638 PRKD2Q9BZL6 878 aa11.96□□□□□ -0.49
CCDC6-203ENST00000518638 HAP1P54257 671 aaPredicted RBP11.95□□□□□ -0.5
CCDC6-203ENST00000518638 TSHZ2Q9NRE2 1034 aa11.94□□□□□ -0.5
CCDC6-203ENST00000518638 PPP4CP60510 307 aa11.93□□□□□ -0.5
CCDC6-203ENST00000518638 RBM33Q96EV2 1170 aaKnown RBP11.93□□□□□ -0.5
CCDC6-203ENST00000518638 MROH2BQ7Z745 1585 aa11.92□□□□□ -0.5
CCDC6-203ENST00000518638 PACS2Q86VP3 889 aa11.92□□□□□ -0.5
CCDC6-203ENST00000518638 TJAP1Q5JTD0 557 aa11.91□□□□□ -0.5
CCDC6-203ENST00000518638 V9GY48 417 aaPredicted RBP11.91□□□□□ -0.5
CCDC6-203ENST00000518638 RIMBP3CA6NJZ7 1639 aa11.9□□□□□ -0.5
CCDC6-203ENST00000518638 RIMBP3BA6NNM3 1639 aa11.9□□□□□ -0.5
CCDC6-203ENST00000518638 RIMBP3Q9UFD9 1639 aa11.9□□□□□ -0.5
CCDC6-203ENST00000518638 FANCD2Q9BXW9 1451 aa11.89□□□□□ -0.51
CCDC6-203ENST00000518638 DPYSL4O14531 572 aa11.88□□□□□ -0.51
CCDC6-203ENST00000518638 CADPS2Q86UW7 1296 aa11.88□□□□□ -0.51
CCDC6-203ENST00000518638 SLC24A1O60721 1099 aa11.87□□□□□ -0.51
CCDC6-203ENST00000518638 CAMK2BQ13554 666 aa11.87□□□□□ -0.51
CCDC6-203ENST00000518638 IL21Q9HBE4 155 aa11.87□□□□□ -0.51
CCDC6-203ENST00000518638 TSKSQ9UJT2 592 aa11.87□□□□□ -0.51
CCDC6-203ENST00000518638 PPP1R18Q6NYC8 613 aa11.86□□□□□ -0.51
CCDC6-203ENST00000518638 DDX12PQ92771 950 aa11.86□□□□□ -0.51
CCDC6-203ENST00000518638 MTRQ99707 1265 aa11.86□□□□□ -0.51
CCDC6-203ENST00000518638 ZNF787Q6DD87 383 aa11.84□□□□□ -0.51
CCDC6-203ENST00000518638 SAMD7Q7Z3H4 446 aa11.84□□□□□ -0.51
CCDC6-203ENST00000518638 ARHGEF11O15085 1522 aa11.83□□□□□ -0.52
CCDC6-203ENST00000518638 MAP3K7O43318 606 aa11.83□□□□□ -0.52
CCDC6-203ENST00000518638 EN1Q05925 392 aaPredicted RBP11.83□□□□□ -0.52
CCDC6-203ENST00000518638 CFTRP13569 1480 aa11.83□□□□□ -0.52
CCDC6-203ENST00000518638 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.82□□□□□ -0.52
CCDC6-203ENST00000518638 NBR1Q14596 966 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms