RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 PRKCSHP14314 528 aaPredicted RBP8.49□□□□□ -1.05
VPS13B-207ENST00000518569 PPP4R3BQ5MIZ7 849 aa8.49□□□□□ -1.05
VPS13B-207ENST00000518569 TYW1BQ6NUM6 668 aa8.49□□□□□ -1.05
VPS13B-207ENST00000518569 ZC3H15Q8WU90 426 aaKnown RBP8.49□□□□□ -1.05
VPS13B-207ENST00000518569 PCDHGA10Q9Y5H3 936 aa8.49□□□□□ -1.05
VPS13B-207ENST00000518569 ARHGAP33O14559 1287 aa8.48□□□□□ -1.05
VPS13B-207ENST00000518569 FOSBP53539 338 aa8.48□□□□□ -1.05
VPS13B-207ENST00000518569 POTEEQ6S8J3 1075 aa8.48□□□□□ -1.05
VPS13B-207ENST00000518569 GPIHBP1Q8IV16 184 aa8.48□□□□□ -1.05
VPS13B-207ENST00000518569 FBXW7Q969H0 707 aa8.48□□□□□ -1.05
VPS13B-207ENST00000518569 KCNH8Q96L42 1107 aa8.47□□□□□ -1.05
VPS13B-207ENST00000518569 EN1Q05925 392 aaPredicted RBP8.46□□□□□ -1.06
VPS13B-207ENST00000518569 PSEN2P49810 448 aa8.45□□□□□ -1.06
VPS13B-207ENST00000518569 ADGRD1Q6QNK2 874 aa8.45□□□□□ -1.06
VPS13B-207ENST00000518569 ZNF454Q8N9F8 522 aa8.45□□□□□ -1.06
VPS13B-207ENST00000518569 ZMYND10O75800 440 aa8.44□□□□□ -1.06
VPS13B-207ENST00000518569 PRIM1P49642 420 aaKnown RBP8.44□□□□□ -1.06
VPS13B-207ENST00000518569 ZDHHC16Q969W1 377 aa8.44□□□□□ -1.06
VPS13B-207ENST00000518569 STAC3Q96MF2 364 aa8.43□□□□□ -1.06
VPS13B-207ENST00000518569 KCNK17Q96T54 332 aa8.43□□□□□ -1.06
VPS13B-207ENST00000518569 NUTM2FA1L443 756 aa8.42□□□□□ -1.06
VPS13B-207ENST00000518569 GPR37O15354 613 aa8.42□□□□□ -1.06
VPS13B-207ENST00000518569 MAP3K7O43318 606 aa8.42□□□□□ -1.06
VPS13B-207ENST00000518569 FCHSD2O94868 740 aa8.42□□□□□ -1.06
VPS13B-207ENST00000518569 DMRTA1Q5VZB9 504 aa8.42□□□□□ -1.06
VPS13B-207ENST00000518569 BARGINQ6ZT62 677 aa8.41□□□□□ -1.06
VPS13B-207ENST00000518569 HIC1Q14526 733 aa8.4□□□□□ -1.06
VPS13B-207ENST00000518569 PTGDRQ13258 359 aa8.39□□□□□ -1.07
VPS13B-207ENST00000518569 C6orf132Q5T0Z8 1188 aa8.39□□□□□ -1.07
VPS13B-207ENST00000518569 CERKQ8TCT0 537 aa8.39□□□□□ -1.07
VPS13B-207ENST00000518569 RBM33Q96EV2 1170 aaKnown RBP8.39□□□□□ -1.07
VPS13B-207ENST00000518569 ADAM33Q9BZ11 813 aa8.39□□□□□ -1.07
VPS13B-207ENST00000518569 TK2O00142 265 aa8.38□□□□□ -1.07
VPS13B-207ENST00000518569 GNPATO15228 680 aa8.38□□□□□ -1.07
VPS13B-207ENST00000518569 BCL2L12Q9HB09 334 aa8.38□□□□□ -1.07
VPS13B-207ENST00000518569 TSR1Q2NL82 804 aaKnown RBP8.37□□□□□ -1.07
VPS13B-207ENST00000518569 NPDC1Q9NQX5 325 aaPredicted RBP8.37□□□□□ -1.07
VPS13B-207ENST00000518569 HCSTQ9UBK5 93 aa8.36□□□□□ -1.07
VPS13B-207ENST00000518569 KCTD12Q96CX2 325 aaKnown RBP8.35□□□□□ -1.07
VPS13B-207ENST00000518569 CDHR5Q9HBB8 845 aa8.35□□□□□ -1.07
VPS13B-207ENST00000518569 MINK1Q8N4C8 1332 aaPredicted RBP8.34□□□□□ -1.07
VPS13B-207ENST00000518569 PTPREP23469 700 aa8.34□□□□□ -1.07
VPS13B-207ENST00000518569 MAP2K5Q13163 448 aa8.34□□□□□ -1.07
VPS13B-207ENST00000518569 RBM27Q9P2N5 1060 aaKnown RBP8.34□□□□□ -1.07
VPS13B-207ENST00000518569 HRO43593 1189 aa8.33□□□□□ -1.08
VPS13B-207ENST00000518569 KRI1Q8N9T8 703 aaKnown RBP8.33□□□□□ -1.08
VPS13B-207ENST00000518569 SLC24A3Q9HC58 644 aa8.33□□□□□ -1.08
VPS13B-207ENST00000518569 PPP1R3GB7ZBB8 358 aa8.32□□□□□ -1.08
VPS13B-207ENST00000518569 AK7Q96M32 723 aa8.32□□□□□ -1.08
VPS13B-207ENST00000518569 PLA2G2EQ9NZK7 142 aa8.32□□□□□ -1.08
VPS13B-207ENST00000518569 IRF6O14896 467 aa8.31□□□□□ -1.08
VPS13B-207ENST00000518569 VPS9D1Q9Y2B5 631 aa8.31□□□□□ -1.08
VPS13B-207ENST00000518569 TTC13Q8NBP0 860 aa8.3□□□□□ -1.08
VPS13B-207ENST00000518569 GOLGA8CPA6NN73 597 aa8.29□□□□□ -1.08
VPS13B-207ENST00000518569 FECHP22830 423 aa8.29□□□□□ -1.08
VPS13B-207ENST00000518569 PRSS12P56730 875 aa8.29□□□□□ -1.08
VPS13B-207ENST00000518569 ONECUT3O60422 494 aaPredicted RBP8.28□□□□□ -1.08
VPS13B-207ENST00000518569 COL9A1P20849 921 aa8.28□□□□□ -1.08
VPS13B-207ENST00000518569 CDCA7LQ96GN5 454 aa8.28□□□□□ -1.08
VPS13B-207ENST00000518569 PTPN5P54829 565 aa8.27□□□□□ -1.09
VPS13B-207ENST00000518569 PADI6Q6TGC4 694 aa8.26□□□□□ -1.09
VPS13B-207ENST00000518569 CCDC102AQ96A19 550 aa8.26□□□□□ -1.09
VPS13B-207ENST00000518569 SLC4A5Q9BY07 1137 aa8.26□□□□□ -1.09
VPS13B-207ENST00000518569 TRIM66O15016 1216 aa8.25□□□□□ -1.09
VPS13B-207ENST00000518569 MRPL50Q8N5N7 158 aaKnown RBP8.25□□□□□ -1.09
VPS13B-207ENST00000518569 ZBED2Q9BTP6 218 aa8.25□□□□□ -1.09
VPS13B-207ENST00000518569 TRIM6-TRIM34B2RNG4 842 aa8.24□□□□□ -1.09
VPS13B-207ENST00000518569 OATP04181 439 aa8.24□□□□□ -1.09
VPS13B-207ENST00000518569 NBPF3Q9H094 633 aa8.24□□□□□ -1.09
VPS13B-207ENST00000518569 WNT2BQ93097 391 aa8.23□□□□□ -1.09
VPS13B-207ENST00000518569 ADGRG1Q9Y653 693 aa8.23□□□□□ -1.09
VPS13B-207ENST00000518569 AMHR2Q16671 573 aa8.22□□□□□ -1.09
VPS13B-207ENST00000518569 PACS2Q86VP3 889 aa8.22□□□□□ -1.09
VPS13B-207ENST00000518569 TSKSQ9UJT2 592 aa8.22□□□□□ -1.09
VPS13B-207ENST00000518569 PDE4DQ08499 809 aa8.21□□□□□ -1.1
VPS13B-207ENST00000518569 FAM198AQ9UFP1 575 aa8.21□□□□□ -1.1
VPS13B-207ENST00000518569 BRPF1P55201 1214 aaPredicted RBP8.2□□□□□ -1.1
VPS13B-207ENST00000518569 RBM46Q8TBY0 533 aaKnown RBP8.2□□□□□ -1.1
VPS13B-207ENST00000518569 PXYLP1Q8TE99 480 aa8.2□□□□□ -1.1
VPS13B-207ENST00000518569 NBPF26B4DH59 902 aa8.19□□□□□ -1.1
VPS13B-207ENST00000518569 PROX2Q3B8N5 592 aa8.19□□□□□ -1.1
VPS13B-207ENST00000518569 THSD4Q6ZMP0 1018 aa8.19□□□□□ -1.1
VPS13B-207ENST00000518569 METTL3Q86U44 580 aaKnown RBP8.19□□□□□ -1.1
VPS13B-207ENST00000518569 BHMG1C9JSJ3 638 aaPredicted RBP8.18□□□□□ -1.1
VPS13B-207ENST00000518569 TATDN2Q93075 761 aa8.18□□□□□ -1.1
VPS13B-207ENST00000518569 EYA1Q99502 592 aa8.18□□□□□ -1.1
VPS13B-207ENST00000518569 RABGEF1Q9UJ41 708 aa8.18□□□□□ -1.1
VPS13B-207ENST00000518569 NEUROD2Q15784 382 aa8.17□□□□□ -1.1
VPS13B-207ENST00000518569 NUDT18Q6ZVK8 323 aa8.17□□□□□ -1.1
VPS13B-207ENST00000518569 KIAA1468Q9P260 1216 aa8.17□□□□□ -1.1
VPS13B-207ENST00000518569 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.16□□□□□ -1.1
VPS13B-207ENST00000518569 FAM161AQ3B820 660 aa8.16□□□□□ -1.1
VPS13B-207ENST00000518569 PNMA3Q9UL41 463 aa8.16□□□□□ -1.1
VPS13B-207ENST00000518569 CLCN1P35523 988 aa8.15□□□□□ -1.1
VPS13B-207ENST00000518569 ANKK1Q8NFD2 765 aa8.15□□□□□ -1.1
VPS13B-207ENST00000518569 PHOX2BQ99453 314 aa8.15□□□□□ -1.1
VPS13B-207ENST00000518569 TMUB1Q9BVT8 246 aa8.15□□□□□ -1.1
VPS13B-207ENST00000518569 C3orf80F5H4A9 247 aa8.14□□□□□ -1.11
VPS13B-207ENST00000518569 PARP9Q8IXQ6 854 aa8.14□□□□□ -1.11
VPS13B-207ENST00000518569 RCCD1A6NED2 376 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms