RNA–Protein interactions for RNA: ENST00000518542.1

CSGALNACT1-206, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-206ENST00000518542 INO80Q9ULG1 1556 aaPredicted RBP11.7□□□□□ -0.54
CSGALNACT1-206ENST00000518542 DAPK1P53355 1430 aa11.69□□□□□ -0.54
CSGALNACT1-206ENST00000518542 YEATS2Q9ULM3 1422 aa11.69□□□□□ -0.54
CSGALNACT1-206ENST00000518542 SPINK5Q9NQ38 1064 aaPredicted RBP11.69□□□□□ -0.54
CSGALNACT1-206ENST00000518542 ATP10AO60312 1499 aa11.69□□□□□ -0.54
CSGALNACT1-206ENST00000518542 SIGLEC1Q9BZZ2 1709 aa11.69□□□□□ -0.54
CSGALNACT1-206ENST00000518542 ABCC5O15440 1437 aa11.69□□□□□ -0.54
CSGALNACT1-206ENST00000518542 ABCA6Q8N139 1617 aa11.68□□□□□ -0.54
CSGALNACT1-206ENST00000518542 MAST1Q9Y2H9 1570 aa11.68□□□□□ -0.54
CSGALNACT1-206ENST00000518542 SHANK2Q9UPX8 1470 aa11.68□□□□□ -0.54
CSGALNACT1-206ENST00000518542 ADGBQ8N7X0 1667 aa11.68□□□□□ -0.54
CSGALNACT1-206ENST00000518542 C9orf84Q5VXU9 1444 aa11.68□□□□□ -0.54
CSGALNACT1-206ENST00000518542 DIP2CQ9Y2E4 1556 aa11.67□□□□□ -0.54
CSGALNACT1-206ENST00000518542 ARID4BQ4LE39 1312 aaPredicted RBP11.66□□□□□ -0.54
CSGALNACT1-206ENST00000518542 ITGAEP38570 1179 aa11.65□□□□□ -0.54
CSGALNACT1-206ENST00000518542 CHIC2Q9UKJ5 165 aa11.65□□□□□ -0.54
CSGALNACT1-206ENST00000518542 PLXNC1O60486 1568 aa11.65□□□□□ -0.54
CSGALNACT1-206ENST00000518542 REREQ9P2R6 1566 aa11.65□□□□□ -0.54
CSGALNACT1-206ENST00000518542 ANKRD30AQ9BXX3 1397 aa11.65□□□□□ -0.55
CSGALNACT1-206ENST00000518542 CAPN15O75808 1086 aa11.64□□□□□ -0.55
CSGALNACT1-206ENST00000518542 A2MP01023 1474 aa11.63□□□□□ -0.55
CSGALNACT1-206ENST00000518542 RRP7BPQ9NSQ0 103 aa11.62□□□□□ -0.55
CSGALNACT1-206ENST00000518542 DHX29Q7Z478 1369 aaKnown RBP11.62□□□□□ -0.55
CSGALNACT1-206ENST00000518542 ADGRL2O95490 1459 aa11.62□□□□□ -0.55
CSGALNACT1-206ENST00000518542 CACNB1Q02641 598 aaPredicted RBP11.61□□□□□ -0.55
CSGALNACT1-206ENST00000518542 KIF15Q9NS87 1388 aa11.61□□□□□ -0.55
CSGALNACT1-206ENST00000518542 NCOA1Q15788 1441 aa11.6□□□□□ -0.55
CSGALNACT1-206ENST00000518542 AGLP35573 1532 aa11.6□□□□□ -0.55
CSGALNACT1-206ENST00000518542 DUOX2Q9NRD8 1548 aa11.6□□□□□ -0.55
CSGALNACT1-206ENST00000518542 ROCK1Q13464 1354 aa11.6□□□□□ -0.55
CSGALNACT1-206ENST00000518542 HSPA2P54652 639 aa11.6□□□□□ -0.55
CSGALNACT1-206ENST00000518542 PTPRKQ15262 1439 aa11.6□□□□□ -0.55
CSGALNACT1-206ENST00000518542 FER1L4A9Z1Z3 1794 aa11.59□□□□□ -0.55
CSGALNACT1-206ENST00000518542 MLECQ14165 292 aa11.58□□□□□ -0.56
CSGALNACT1-206ENST00000518542 ZNF219Q9P2Y4 722 aaPredicted RBP11.58□□□□□ -0.56
CSGALNACT1-206ENST00000518542 EIF2AK4Q9P2K8 1649 aaKnown RBP11.57□□□□□ -0.56
CSGALNACT1-206ENST00000518542 KIF3BO15066 747 aa11.57□□□□□ -0.56
CSGALNACT1-206ENST00000518542 ERBINQ96RT1 1412 aa11.57□□□□□ -0.56
CSGALNACT1-206ENST00000518542 GGT6Q6P531 493 aa11.56□□□□□ -0.56
CSGALNACT1-206ENST00000518542 ESF1Q9H501 851 aaKnown RBP11.56□□□□□ -0.56
CSGALNACT1-206ENST00000518542 ANKRD50Q9ULJ7 1429 aa11.55□□□□□ -0.56
CSGALNACT1-206ENST00000518542 CERKQ8TCT0 537 aa11.55□□□□□ -0.56
CSGALNACT1-206ENST00000518542 STRCQ7RTU9 1775 aa11.54□□□□□ -0.56
CSGALNACT1-206ENST00000518542 PREX1Q8TCU6 1659 aa11.54□□□□□ -0.56
CSGALNACT1-206ENST00000518542 RNF17Q9BXT8 1623 aaKnown RBP11.53□□□□□ -0.56
CSGALNACT1-206ENST00000518542 GCC2Q8IWJ2 1684 aa11.52□□□□□ -0.56
CSGALNACT1-206ENST00000518542 HFM1A2PYH4 1435 aa11.52□□□□□ -0.57
CSGALNACT1-206ENST00000518542 TRIM26Q12899 539 aaPredicted RBP11.51□□□□□ -0.57
CSGALNACT1-206ENST00000518542 KANK1Q14678 1352 aa11.51□□□□□ -0.57
CSGALNACT1-206ENST00000518542 NAIPQ13075 1403 aa11.51□□□□□ -0.57
CSGALNACT1-206ENST00000518542 CNTLNQ9NXG0 1405 aa11.51□□□□□ -0.57
CSGALNACT1-206ENST00000518542 FAM135AQ9P2D6 1515 aa11.5□□□□□ -0.57
CSGALNACT1-206ENST00000518542 ILDR2Q71H61 639 aa11.5□□□□□ -0.57
CSGALNACT1-206ENST00000518542 WASHC2CQ9Y4E1 1318 aa11.5□□□□□ -0.57
CSGALNACT1-206ENST00000518542 DEPDC5O75140 1603 aa11.49□□□□□ -0.57
CSGALNACT1-206ENST00000518542 CLTCQ00610 1675 aaKnown RBP11.49□□□□□ -0.57
CSGALNACT1-206ENST00000518542 ZC3H13Q5T200 1668 aaKnown RBP11.49□□□□□ -0.57
CSGALNACT1-206ENST00000518542 PRDM15P57071 1507 aaPredicted RBP11.48□□□□□ -0.57
CSGALNACT1-206ENST00000518542 KDM5DQ9BY66 1539 aa11.48□□□□□ -0.57
CSGALNACT1-206ENST00000518542 MROH2AA6NES4 1674 aa11.48□□□□□ -0.57
CSGALNACT1-206ENST00000518542 MROH1Q8NDA8 1641 aa11.47□□□□□ -0.57
CSGALNACT1-206ENST00000518542 SETD5Q9C0A6 1442 aa11.47□□□□□ -0.57
CSGALNACT1-206ENST00000518542 ACIN1Q9UKV3 1341 aaKnown RBP11.47□□□□□ -0.57
CSGALNACT1-206ENST00000518542 CEP152O94986 1710 aa11.46□□□□□ -0.57
CSGALNACT1-206ENST00000518542 UNC13BO14795 1591 aa11.46□□□□□ -0.57
CSGALNACT1-206ENST00000518542 SETD1BQ9UPS6 1966 aaKnown RBP11.46□□□□□ -0.58
CSGALNACT1-206ENST00000518542 ZMYM3Q14202 1370 aa11.45□□□□□ -0.58
CSGALNACT1-206ENST00000518542 C3P01024 1663 aa11.45□□□□□ -0.58
CSGALNACT1-206ENST00000518542 ABCC3O15438 1527 aa11.45□□□□□ -0.58
CSGALNACT1-206ENST00000518542 NUP155O75694 1391 aa11.44□□□□□ -0.58
CSGALNACT1-206ENST00000518542 DISP3Q9P2K9 1392 aa11.44□□□□□ -0.58
CSGALNACT1-206ENST00000518542 ABCB7O75027 752 aa11.44□□□□□ -0.58
CSGALNACT1-206ENST00000518542 CEBPAP49715 358 aaPredicted RBP11.44□□□□□ -0.58
CSGALNACT1-206ENST00000518542 TRIM52Q96A61 297 aa11.44□□□□□ -0.58
CSGALNACT1-206ENST00000518542 CAMSAP1Q5T5Y3 1602 aa11.43□□□□□ -0.58
CSGALNACT1-206ENST00000518542 VWDEQ8N2E2 1590 aa11.43□□□□□ -0.58
CSGALNACT1-206ENST00000518542 SOCS7O14512 581 aa11.43□□□□□ -0.58
CSGALNACT1-206ENST00000518542 CFAP65Q6ZU64 1925 aaKnown RBP11.43□□□□□ -0.58
CSGALNACT1-206ENST00000518542 IQGAP3Q86VI3 1631 aa11.42□□□□□ -0.58
CSGALNACT1-206ENST00000518542 SPATA31D1Q6ZQQ2 1576 aa11.42□□□□□ -0.58
CSGALNACT1-206ENST00000518542 LMTK2Q8IWU2 1503 aa11.42□□□□□ -0.58
CSGALNACT1-206ENST00000518542 POLA2Q14181 598 aa11.42□□□□□ -0.58
CSGALNACT1-206ENST00000518542 TET3O43151 1660 aa11.42□□□□□ -0.58
CSGALNACT1-206ENST00000518542 RAB3GAP2Q9H2M9 1393 aa11.41□□□□□ -0.58
CSGALNACT1-206ENST00000518542 DSG3P32926 999 aa11.41□□□□□ -0.58
CSGALNACT1-206ENST00000518542 LTBP4Q8N2S1 1624 aa11.41□□□□□ -0.58
CSGALNACT1-206ENST00000518542 PZPP20742 1482 aa11.4□□□□□ -0.58
CSGALNACT1-206ENST00000518542 HRCP23327 699 aa11.4□□□□□ -0.58
CSGALNACT1-206ENST00000518542 ARHGAP31Q2M1Z3 1444 aa11.4□□□□□ -0.58
CSGALNACT1-206ENST00000518542 UHRF1BP1Q6BDS2 1440 aa11.4□□□□□ -0.58
CSGALNACT1-206ENST00000518542 NPATQ14207 1427 aa11.39□□□□□ -0.59
CSGALNACT1-206ENST00000518542 EFCAB6Q5THR3 1501 aa11.39□□□□□ -0.59
CSGALNACT1-206ENST00000518542 PTPRTO14522 1441 aa11.38□□□□□ -0.59
CSGALNACT1-206ENST00000518542 RPRD2Q5VT52 1461 aaKnown RBP11.38□□□□□ -0.59
CSGALNACT1-206ENST00000518542 FBXO31Q5XUX0 539 aaPredicted RBP11.37□□□□□ -0.59
CSGALNACT1-206ENST00000518542 E9PCH4 1651 aa11.36□□□□□ -0.59
CSGALNACT1-206ENST00000518542 PCGF6Q9BYE7 350 aa11.35□□□□□ -0.59
CSGALNACT1-206ENST00000518542 TNRQ92752 1358 aa11.35□□□□□ -0.59
CSGALNACT1-206ENST00000518542 ERVK-7P63135 1459 aa11.35□□□□□ -0.59
CSGALNACT1-206ENST00000518542 IQSEC2Q5JU85 1478 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms