RNA–Protein interactions for RNA: ENST00000518537.5

PCM1-206, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-206ENST00000518537 DEPDC5O75140 1603 aa23.42■■□□□ 1.34
PCM1-206ENST00000518537 POGZQ7Z3K3 1410 aa23.41■■□□□ 1.34
PCM1-206ENST00000518537 DHX29Q7Z478 1369 aaKnown RBP23.41■■□□□ 1.34
PCM1-206ENST00000518537 EIF2AK4Q9P2K8 1649 aaKnown RBP23.41■■□□□ 1.34
PCM1-206ENST00000518537 NEO1Q92859 1461 aa23.41■■□□□ 1.34
PCM1-206ENST00000518537 KDM5CP41229 1560 aa23.39■■□□□ 1.33
PCM1-206ENST00000518537 PLA2R1Q13018 1463 aa23.39■■□□□ 1.33
PCM1-206ENST00000518537 MAP3K4Q9Y6R4 1608 aa23.39■■□□□ 1.33
PCM1-206ENST00000518537 ZNF326Q5BKZ1 582 aaKnown RBP23.38■■□□□ 1.33
PCM1-206ENST00000518537 KANK1Q14678 1352 aa23.38■■□□□ 1.33
PCM1-206ENST00000518537 KIF3BO15066 747 aa23.37■■□□□ 1.33
PCM1-206ENST00000518537 GLI2P10070 1586 aa23.37■■□□□ 1.33
PCM1-206ENST00000518537 UHRF1BP1Q6BDS2 1440 aa23.37■■□□□ 1.33
PCM1-206ENST00000518537 ATP10AO60312 1499 aa23.36■■□□□ 1.33
PCM1-206ENST00000518537 CENPBP07199 599 aaPredicted RBP23.35■■□□□ 1.33
PCM1-206ENST00000518537 HECW2Q9P2P5 1572 aa23.35■■□□□ 1.33
PCM1-206ENST00000518537 E9PCH4 1651 aa23.35■■□□□ 1.33
PCM1-206ENST00000518537 MLH3Q9UHC1 1453 aa23.34■■□□□ 1.33
PCM1-206ENST00000518537 TET3O43151 1660 aa23.33■■□□□ 1.33
PCM1-206ENST00000518537 YTHDC1Q96MU7 727 aaKnown RBP23.33■■□□□ 1.33
PCM1-206ENST00000518537 DNAJC5Q9H3Z4 198 aa23.33■■□□□ 1.33
PCM1-206ENST00000518537 DCAF11Q8TEB1 546 aa23.33■■□□□ 1.32
PCM1-206ENST00000518537 KDM2AQ9Y2K7 1162 aa23.33■■□□□ 1.32
PCM1-206ENST00000518537 A2MP01023 1474 aa23.32■■□□□ 1.32
PCM1-206ENST00000518537 VWDEQ8N2E2 1590 aa23.32■■□□□ 1.32
PCM1-206ENST00000518537 PRDM15P57071 1507 aaPredicted RBP23.31■■□□□ 1.32
PCM1-206ENST00000518537 RALGAPBQ86X10 1494 aa23.3■■□□□ 1.32
PCM1-206ENST00000518537 MROH1Q8NDA8 1641 aa23.29■■□□□ 1.32
PCM1-206ENST00000518537 SPATA31E1Q6ZUB1 1445 aa23.28■■□□□ 1.32
PCM1-206ENST00000518537 DIP2BQ9P265 1576 aa23.28■■□□□ 1.32
PCM1-206ENST00000518537 FAM69CQ0P6D2 419 aa23.27■■□□□ 1.32
PCM1-206ENST00000518537 RGL3Q3MIN7 710 aa23.27■■□□□ 1.32
PCM1-206ENST00000518537 SPHKAPQ2M3C7 1700 aa23.27■■□□□ 1.32
PCM1-206ENST00000518537 WASHC2AQ641Q2 1341 aa23.27■■□□□ 1.32
PCM1-206ENST00000518537 RAPGEF3O95398 923 aa23.26■■□□□ 1.31
PCM1-206ENST00000518537 ABCA6Q8N139 1617 aa23.26■■□□□ 1.31
PCM1-206ENST00000518537 TRPM2O94759 1503 aa23.25■■□□□ 1.31
PCM1-206ENST00000518537 RNF17Q9BXT8 1623 aaKnown RBP23.25■■□□□ 1.31
PCM1-206ENST00000518537 RICTORQ6R327 1708 aa23.25■■□□□ 1.31
PCM1-206ENST00000518537 FRMPD1Q5SYB0 1578 aa23.23■■□□□ 1.31
PCM1-206ENST00000518537 USP47Q96K76 1375 aa23.23■■□□□ 1.31
PCM1-206ENST00000518537 PTPRTO14522 1441 aa23.23■■□□□ 1.31
PCM1-206ENST00000518537 ANP32CO43423 234 aa23.23■■□□□ 1.31
PCM1-206ENST00000518537 POLR1AO95602 1720 aaPredicted RBP23.22■■□□□ 1.31
PCM1-206ENST00000518537 CCDC7Q96M83 1385 aa23.21■■□□□ 1.31
PCM1-206ENST00000518537 CARD11Q9BXL7 1154 aa23.21■■□□□ 1.31
PCM1-206ENST00000518537 PRAG1Q86YV5 1406 aa23.2■■□□□ 1.31
PCM1-206ENST00000518537 CEP152O94986 1710 aa23.2■■□□□ 1.3
PCM1-206ENST00000518537 BCORL1Q5H9F3 1711 aa23.19■■□□□ 1.3
PCM1-206ENST00000518537 C11orf95C9JLR9 678 aaPredicted RBP23.19■■□□□ 1.3
PCM1-206ENST00000518537 TRPM1Q7Z4N2 1603 aa23.19■■□□□ 1.3
PCM1-206ENST00000518537 EFCAB6Q5THR3 1501 aa23.18■■□□□ 1.3
PCM1-206ENST00000518537 LMTK2Q8IWU2 1503 aa23.18■■□□□ 1.3
PCM1-206ENST00000518537 DIP2CQ9Y2E4 1556 aa23.18■■□□□ 1.3
PCM1-206ENST00000518537 CLTCL1P53675 1640 aa23.18■■□□□ 1.3
PCM1-206ENST00000518537 TSPOAP1O95153 1857 aa23.18■■□□□ 1.3
PCM1-206ENST00000518537 ROCK2O75116 1388 aaKnown RBP23.16■■□□□ 1.3
PCM1-206ENST00000518537 PPRC1Q5VV67 1664 aaKnown RBP23.16■■□□□ 1.3
PCM1-206ENST00000518537 GGT6Q6P531 493 aa23.15■■□□□ 1.3
PCM1-206ENST00000518537 CNTLNQ9NXG0 1405 aa23.14■■□□□ 1.29
PCM1-206ENST00000518537 KIF7Q2M1P5 1343 aa23.13■■□□□ 1.29
PCM1-206ENST00000518537 CCER2I3L3R5 266 aa23.1■■□□□ 1.29
PCM1-206ENST00000518537 YEATS2Q9ULM3 1422 aa23.1■■□□□ 1.29
PCM1-206ENST00000518537 ZMYM4Q5VZL5 1548 aa23.09■■□□□ 1.29
PCM1-206ENST00000518537 LAMC1P11047 1609 aa23.08■■□□□ 1.28
PCM1-206ENST00000518537 WASHC2CQ9Y4E1 1318 aa23.07■■□□□ 1.28
PCM1-206ENST00000518537 ABCC3O15438 1527 aa23.07■■□□□ 1.28
PCM1-206ENST00000518537 NEURL4Q96JN8 1562 aa23.07■■□□□ 1.28
PCM1-206ENST00000518537 KIF1BO60333 1816 aa23.07■■□□□ 1.28
PCM1-206ENST00000518537 GPRASP1Q5JY77 1395 aa23.06■■□□□ 1.28
PCM1-206ENST00000518537 STAC3Q96MF2 364 aa23.06■■□□□ 1.28
PCM1-206ENST00000518537 ARID4BQ4LE39 1312 aaPredicted RBP23.06■■□□□ 1.28
PCM1-206ENST00000518537 NBPF1Q3BBV0 1214 aa23.06■■□□□ 1.28
PCM1-206ENST00000518537 KIF13AQ9H1H9 1805 aa23.05■■□□□ 1.28
PCM1-206ENST00000518537 ST20-MTHFSA0A0A6YYL1 179 aa23.05■■□□□ 1.28
PCM1-206ENST00000518537 UGGT1Q9NYU2 1555 aa23.05■■□□□ 1.28
PCM1-206ENST00000518537 MADDQ8WXG6 1647 aa23.04■■□□□ 1.28
PCM1-206ENST00000518537 CAMSAP1Q5T5Y3 1602 aa23.03■■□□□ 1.28
PCM1-206ENST00000518537 NPATQ14207 1427 aa23.03■■□□□ 1.28
PCM1-206ENST00000518537 POLR3GLQ9BT43 218 aa23.03■■□□□ 1.28
PCM1-206ENST00000518537 ZC3H13Q5T200 1668 aaKnown RBP23■■□□□ 1.27
PCM1-206ENST00000518537 CFAP65Q6ZU64 1925 aaKnown RBP22.99■■□□□ 1.27
PCM1-206ENST00000518537 SCAF1Q9H7N4 1312 aaKnown RBP22.98■■□□□ 1.27
PCM1-206ENST00000518537 MROH2AA6NES4 1674 aa22.97■■□□□ 1.27
PCM1-206ENST00000518537 IFT172Q9UG01 1749 aa22.94■■□□□ 1.26
PCM1-206ENST00000518537 ADGRB3O60242 1522 aa22.94■■□□□ 1.26
PCM1-206ENST00000518537 MYOM2P54296 1465 aa22.93■■□□□ 1.26
PCM1-206ENST00000518537 CHGAP10645 457 aaKnown RBP22.93■■□□□ 1.26
PCM1-206ENST00000518537 REREQ9P2R6 1566 aa22.93■■□□□ 1.26
PCM1-206ENST00000518537 SIGLEC1Q9BZZ2 1709 aa22.93■■□□□ 1.26
PCM1-206ENST00000518537 ARHGAP31Q2M1Z3 1444 aa22.92■■□□□ 1.26
PCM1-206ENST00000518537 KIAA1210Q9ULL0 1709 aa22.92■■□□□ 1.26
PCM1-206ENST00000518537 NOS1P29475 1434 aa22.92■■□□□ 1.26
PCM1-206ENST00000518537 PRKRIP1Q9H875 184 aaPredicted RBP22.9■■□□□ 1.26
PCM1-206ENST00000518537 IQGAP1P46940 1657 aa22.9■■□□□ 1.26
PCM1-206ENST00000518537 AGLP35573 1532 aa22.88■■□□□ 1.25
PCM1-206ENST00000518537 SYNMO15061 1565 aa22.87■■□□□ 1.25
PCM1-206ENST00000518537 PIK3C2BO00750 1634 aa22.86■■□□□ 1.25
PCM1-206ENST00000518537 COL17A1Q9UMD9 1497 aaPredicted RBP22.86■■□□□ 1.25
PCM1-206ENST00000518537 GTF3C3Q9Y5Q9 886 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms